RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 FUNDC2Q9BWH2 189 aa4.42□□□□□ -1.7
CCDC6-203ENST00000518638 IFI27L2Q9H2X8 130 aa4.42□□□□□ -1.7
CCDC6-203ENST00000518638 MRPL27Q9P0M9 148 aaKnown RBP4.42□□□□□ -1.7
CCDC6-203ENST00000518638 MLXQ9UH92 298 aa4.42□□□□□ -1.7
CCDC6-203ENST00000518638 EPM2AB3EWF7 344 aa4.41□□□□□ -1.7
CCDC6-203ENST00000518638 M0R2N4 97 aa4.41□□□□□ -1.7
CCDC6-203ENST00000518638 DYNC1I1O14576 645 aa4.41□□□□□ -1.7
CCDC6-203ENST00000518638 DHFRP00374 187 aa4.41□□□□□ -1.7
CCDC6-203ENST00000518638 IFNA10P01566 189 aa4.41□□□□□ -1.7
CCDC6-203ENST00000518638 RPL35AP18077 110 aaKnown RBP4.41□□□□□ -1.7
CCDC6-203ENST00000518638 RCC1P18754 421 aaPredicted RBP4.41□□□□□ -1.7
CCDC6-203ENST00000518638 ZNF93P35789 620 aaPredicted RBP4.41□□□□□ -1.7
CCDC6-203ENST00000518638 PPT1P50897 306 aa4.41□□□□□ -1.7
CCDC6-203ENST00000518638 PPP3R1P63098 170 aa4.41□□□□□ -1.7
CCDC6-203ENST00000518638 RPL24P83731 157 aaKnown RBP4.41□□□□□ -1.7
CCDC6-203ENST00000518638 C15orf32Q32M92 178 aa4.41□□□□□ -1.7
CCDC6-203ENST00000518638 TP53I3Q53FA7 332 aa4.41□□□□□ -1.7
CCDC6-203ENST00000518638 LPCAT4Q643R3 524 aa4.41□□□□□ -1.7
CCDC6-203ENST00000518638 CGB2Q6NT52 195 aa4.41□□□□□ -1.7
CCDC6-203ENST00000518638 NFE4Q86UQ8 179 aa4.41□□□□□ -1.7
CCDC6-203ENST00000518638 DHFR2Q86XF0 187 aa4.41□□□□□ -1.7
CCDC6-203ENST00000518638 UBE2DNLQ8IWF7 75 aa4.41□□□□□ -1.7
CCDC6-203ENST00000518638 CXorf58Q96LI9 332 aa4.41□□□□□ -1.7
CCDC6-203ENST00000518638 UHRF2Q96PU4 802 aa4.41□□□□□ -1.7
CCDC6-203ENST00000518638 SPIN2AQ99865 258 aa4.41□□□□□ -1.7
CCDC6-203ENST00000518638 SPIN2BQ9BPZ2 258 aa4.41□□□□□ -1.7
CCDC6-203ENST00000518638 PARP12Q9H0J9 701 aaKnown RBP4.41□□□□□ -1.7
CCDC6-203ENST00000518638 TMEM138Q9NPI0 162 aa4.41□□□□□ -1.7
CCDC6-203ENST00000518638 DIMT1Q9UNQ2 313 aaKnown RBP4.41□□□□□ -1.7
CCDC6-203ENST00000518638 UFC1Q9Y3C8 167 aa4.41□□□□□ -1.7
CCDC6-203ENST00000518638 PEX16Q9Y5Y5 336 aa4.41□□□□□ -1.7
CCDC6-203ENST00000518638 DMBT1Q9UGM3 2413 aaPredicted RBP4.4□□□□□ -1.7
CCDC6-203ENST00000518638 OR4C45A6NMZ5 311 aa4.4□□□□□ -1.71
CCDC6-203ENST00000518638 L7N2F9 121 aa4.4□□□□□ -1.71
CCDC6-203ENST00000518638 CDRT1O95170 752 aa4.4□□□□□ -1.71
CCDC6-203ENST00000518638 IGKV3-20P01619 116 aa4.4□□□□□ -1.71
CCDC6-203ENST00000518638 IGKV1-16P04430 117 aa4.4□□□□□ -1.71
CCDC6-203ENST00000518638 C8orf88P0DMB2 117 aa4.4□□□□□ -1.71
CCDC6-203ENST00000518638 MIFP14174 115 aa4.4□□□□□ -1.71
CCDC6-203ENST00000518638 ATP5IP56385 69 aaPredicted RBP4.4□□□□□ -1.71
CCDC6-203ENST00000518638 DEFA5Q01523 94 aa4.4□□□□□ -1.71
CCDC6-203ENST00000518638 GAGE5Q13069 117 aa4.4□□□□□ -1.71
CCDC6-203ENST00000518638 GAGE6Q13070 117 aa4.4□□□□□ -1.71
CCDC6-203ENST00000518638 TMEM187Q14656 261 aa4.4□□□□□ -1.71
CCDC6-203ENST00000518638 RTL8BQ17RB0 113 aa4.4□□□□□ -1.71
CCDC6-203ENST00000518638 SLC22A6Q4U2R8 563 aa4.4□□□□□ -1.71
CCDC6-203ENST00000518638 RPL39P5Q59GN2 51 aa4.4□□□□□ -1.71
CCDC6-203ENST00000518638 DDI2Q5TDH0 399 aa4.4□□□□□ -1.71
CCDC6-203ENST00000518638 TTC23Q5W5X9 447 aa4.4□□□□□ -1.71
CCDC6-203ENST00000518638 Q6ZR54 194 aa4.4□□□□□ -1.71
CCDC6-203ENST00000518638 MOB1BQ7L9L4 216 aa4.4□□□□□ -1.71
CCDC6-203ENST00000518638 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.4□□□□□ -1.71
CCDC6-203ENST00000518638 CD300LFQ8TDQ1 290 aa4.4□□□□□ -1.71
CCDC6-203ENST00000518638 IL1F10Q8WWZ1 152 aa4.4□□□□□ -1.71
CCDC6-203ENST00000518638 SRSF12Q8WXF0 261 aaKnown RBP4.4□□□□□ -1.71
CCDC6-203ENST00000518638 CACNG8Q8WXS5 425 aa4.4□□□□□ -1.71
CCDC6-203ENST00000518638 EEF1AKMT3Q96AZ1 226 aa4.4□□□□□ -1.71
CCDC6-203ENST00000518638 PINX1Q96BK5 328 aaKnown RBP4.4□□□□□ -1.71
CCDC6-203ENST00000518638 NRBF2Q96F24 287 aa4.4□□□□□ -1.71
CCDC6-203ENST00000518638 FAM210BQ96KR6 192 aa4.4□□□□□ -1.71
CCDC6-203ENST00000518638 RNF167Q9H6Y7 350 aa4.4□□□□□ -1.71
CCDC6-203ENST00000518638 SDF2L1Q9HCN8 221 aa4.4□□□□□ -1.71
CCDC6-203ENST00000518638 ZNF581Q9P0T4 197 aa4.4□□□□□ -1.71
CCDC6-203ENST00000518638 ZNF221Q9UK13 617 aa4.4□□□□□ -1.71
CCDC6-203ENST00000518638 MGAT4AQ9UM21 535 aa4.4□□□□□ -1.71
CCDC6-203ENST00000518638 ZNF257Q9Y2Q1 563 aa4.4□□□□□ -1.71
CCDC6-203ENST00000518638 TRBV7-1A0A0A6YYK4 115 aa4.39□□□□□ -1.71
CCDC6-203ENST00000518638 DAPL1A0PJW8 107 aa4.39□□□□□ -1.71
CCDC6-203ENST00000518638 PPP5D1E7EU14 171 aa4.39□□□□□ -1.71
CCDC6-203ENST00000518638 MRPS14O60783 128 aaKnown RBP4.39□□□□□ -1.71
CCDC6-203ENST00000518638 INAFM2P0DMQ5 153 aa4.39□□□□□ -1.71
CCDC6-203ENST00000518638 FUT3P21217 361 aa4.39□□□□□ -1.71
CCDC6-203ENST00000518638 ZBTB25P24278 435 aa4.39□□□□□ -1.71
CCDC6-203ENST00000518638 HLA-DMBP28068 263 aa4.39□□□□□ -1.71
CCDC6-203ENST00000518638 PSMB6P28072 239 aa4.39□□□□□ -1.71
CCDC6-203ENST00000518638 HOXA1P49639 335 aaPredicted RBP4.39□□□□□ -1.71
CCDC6-203ENST00000518638 ZNF85Q03923 595 aa4.39□□□□□ -1.71
CCDC6-203ENST00000518638 TPBGQ13641 420 aa4.39□□□□□ -1.71
CCDC6-203ENST00000518638 HMGN3Q15651 99 aa4.39□□□□□ -1.71
CCDC6-203ENST00000518638 TNXAQ16473 311 aa4.39□□□□□ -1.71
CCDC6-203ENST00000518638 VMA21Q3ZAQ7 101 aa4.39□□□□□ -1.71
CCDC6-203ENST00000518638 RNF212Q495C1 297 aa4.39□□□□□ -1.71
CCDC6-203ENST00000518638 C12orf73Q69YU5 71 aa4.39□□□□□ -1.71
CCDC6-203ENST00000518638 DEFB107AQ8IZN7 70 aa4.39□□□□□ -1.71
CCDC6-203ENST00000518638 TTC9CQ8N5M4 171 aa4.39□□□□□ -1.71
CCDC6-203ENST00000518638 DMBX1Q8NFW5 382 aa4.39□□□□□ -1.71
CCDC6-203ENST00000518638 OR5AK2Q8NH90 309 aa4.39□□□□□ -1.71
CCDC6-203ENST00000518638 MAGT1Q9H0U3 335 aa4.39□□□□□ -1.71
CCDC6-203ENST00000518638 DEFB131BA0A096LNP1 70 aa4.38□□□□□ -1.71
CCDC6-203ENST00000518638 HELTA6NFD8 242 aa4.38□□□□□ -1.71
CCDC6-203ENST00000518638 SNTNA6NMZ2 147 aa4.38□□□□□ -1.71
CCDC6-203ENST00000518638 C15orf61A6NNL5 157 aa4.38□□□□□ -1.71
CCDC6-203ENST00000518638 PDCD6O75340 191 aa4.38□□□□□ -1.71
CCDC6-203ENST00000518638 OR2J3O76001 311 aa4.38□□□□□ -1.71
CCDC6-203ENST00000518638 GAS8-AS1O95177 125 aa4.38□□□□□ -1.71
CCDC6-203ENST00000518638 CA1P00915 261 aaPredicted RBP4.38□□□□□ -1.71
CCDC6-203ENST00000518638 HLA-AP01891 365 aaKnown RBP4.38□□□□□ -1.71
CCDC6-203ENST00000518638 CD74P04233 296 aa4.38□□□□□ -1.71
CCDC6-203ENST00000518638 CRYGBP07316 175 aa4.38□□□□□ -1.71
CCDC6-203ENST00000518638 HIST1H1BP16401 226 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms