RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 FMC1Q96HJ9 113 aa1.72□□□□□ -2.13
RNU1-40P-201ENST00000516816 GPR82Q96P67 336 aa1.72□□□□□ -2.13
RNU1-40P-201ENST00000516816 RNF5Q99942 180 aa1.72□□□□□ -2.13
RNU1-40P-201ENST00000516816 SLC25A33Q9BSK2 321 aa1.72□□□□□ -2.13
RNU1-40P-201ENST00000516816 NDFIP1Q9BT67 221 aa1.72□□□□□ -2.13
RNU1-40P-201ENST00000516816 TMEM70Q9BUB7 260 aa1.72□□□□□ -2.13
RNU1-40P-201ENST00000516816 PAXXQ9BUH6 204 aa1.72□□□□□ -2.13
RNU1-40P-201ENST00000516816 ARRDC1-AS1Q9H2J1 176 aa1.72□□□□□ -2.13
RNU1-40P-201ENST00000516816 MS4A6AQ9H2W1 248 aa1.72□□□□□ -2.13
RNU1-40P-201ENST00000516816 IFI27L2Q9H2X8 130 aa1.72□□□□□ -2.13
RNU1-40P-201ENST00000516816 PRDM13Q9H4Q3 707 aa1.72□□□□□ -2.13
RNU1-40P-201ENST00000516816 AAMDCQ9H7C9 122 aa1.72□□□□□ -2.13
RNU1-40P-201ENST00000516816 VSIRQ9H7M9 311 aa1.72□□□□□ -2.13
RNU1-40P-201ENST00000516816 AKIRIN1Q9H9L7 192 aaPredicted RBP1.72□□□□□ -2.13
RNU1-40P-201ENST00000516816 SAP30LQ9HAJ7 183 aa1.72□□□□□ -2.13
RNU1-40P-201ENST00000516816 HES4Q9HCC6 221 aa1.72□□□□□ -2.13
RNU1-40P-201ENST00000516816 NRN1Q9NPD7 142 aa1.72□□□□□ -2.13
RNU1-40P-201ENST00000516816 TMEM140Q9NV12 185 aa1.72□□□□□ -2.13
RNU1-40P-201ENST00000516816 PLA2G3Q9NZ20 509 aa1.72□□□□□ -2.13
RNU1-40P-201ENST00000516816 CLCF1Q9UBD9 225 aa1.72□□□□□ -2.13
RNU1-40P-201ENST00000516816 TCF19Q9Y242 345 aa1.72□□□□□ -2.13
RNU1-40P-201ENST00000516816 FOXA2Q9Y261 457 aaPredicted RBP1.72□□□□□ -2.13
RNU1-40P-201ENST00000516816 ZFP30Q9Y2G7 519 aa1.72□□□□□ -2.13
RNU1-40P-201ENST00000516816 ZNF835Q9Y2P0 537 aa1.72□□□□□ -2.13
RNU1-40P-201ENST00000516816 MRPS16Q9Y3D3 137 aaKnown RBP1.72□□□□□ -2.13
RNU1-40P-201ENST00000516816 PPIAL4AQ9Y536 164 aa1.72□□□□□ -2.13
RNU1-40P-201ENST00000516816 PTPRBP23467 1997 aa1.72□□□□□ -2.13
RNU1-40P-201ENST00000516816 CNTRLQ7Z7A1 2325 aa1.72□□□□□ -2.13
RNU1-40P-201ENST00000516816 CACNA1EQ15878 2313 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 IGHV3-43A0A0B4J1X8 118 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 SMIM27A0A1W2PRY6 76 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 TCRBV4S1A1TA0A5B7 111 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 A4D1N5 150 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 C5orf63A6NC05 138 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 PGPA6NDG6 321 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 C15orf61A6NNL5 157 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 C15orf62A8K5M9 175 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 PMS2P5A8MQ11 134 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 C22orf46C9J442 243 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 INS-IGF2F8WCM5 200 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 C16orf97H3BN30 126 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 M0R1B8 84 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 RRHO14718 337 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 DLEU1O43261 78 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 SPRY3O43610 288 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 SPINK4O60575 86 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 RAMP3O60896 148 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 ZNF324O75467 553 aaPredicted RBP1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 SERF1AO75920 110 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 LYZL6O75951 148 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 AGFG2O95081 481 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 LEPROTL1O95214 131 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 CNIH1O95406 144 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 CA2P00918 260 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 CGAP01215 116 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 IGKV1-39P01597 117 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 IGKV3-15P01624 115 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 IGHG3P01860 377 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 HLA-DRB1P01911 266 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 IGKV1D-39P04432 117 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 CELA3AP09093 270 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 NBEAP1P0C6P0 100 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 OR9G9P0C7N8 305 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 IGHV3-43DP0DP04 118 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 CD33P20138 364 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 HNF1AP20823 631 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 MDKP21741 143 aaPredicted RBP1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 IGHV1-2P23083 117 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 COL8A1P27658 744 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 HTR1DP28221 377 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 SRIP30626 198 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 NTF4P34130 210 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 ADMP35318 185 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 CDKN1BP46527 198 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 ATP5G3P48201 142 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 CEBPDP49716 269 aaPredicted RBP1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 CAMPP49913 170 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 TDGF1P3P51864 188 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 MFAP2P55001 183 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 RPL15P61313 204 aaKnown RBP1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 UBE2L3P68036 154 aaKnown RBP1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 HBBP68871 147 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 ZXDAP98168 799 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 PRCDQ00LT1 54 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 CD69Q07108 199 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 TFF3Q07654 80 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 ARL16Q0P5N6 197 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 FOXF2Q12947 444 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 UBE2V1Q13404 147 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 KLF5Q13887 457 aaPredicted RBP1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 TRIP6Q15654 476 aaKnown RBP1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 ZNF726P1Q15940 193 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 POU2AF1Q16633 256 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 IZUMO4Q1ZYL8 232 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 FAM71F2Q6NXP2 309 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 SLC25A34Q6PIV7 304 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 RBPMS2Q6ZRY4 209 aaKnown RBP1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 C22orf34Q6ZV56 151 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 FA2HQ7L5A8 372 aa1.71□□□□□ -2.14
RNU1-40P-201ENST00000516816 TCF24Q7RTU0 167 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms