RNA–Protein interactions for RNA: ENST00000515854.5

ATP2C1-223, Transcript of ATPase secretory pathway Ca2+ transporting 1, human

TSL 4

Gene ATP2C1, Length 561 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2C1-223	ENST00000515854	ADGRG4	Q8IZF6	3080 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	HRNR	Q86YZ3	2850 aa	Predicted RBP	3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	IGHV4-61	A0A0C4DH41	118 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854		C9JQL5	133 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	TIMM23	O14925	209 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	AGPAT2	O15120	278 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	TOX4	O94842	621 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	NDUFA3	O95167	84 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	IGKV1D-33	P01593	117 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	IGKV1-33	P01594	117 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	OPN1MW	P04001	364 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	OPN1MW2	P0DN77	364 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	OPN1MW3	P0DN78	364 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	ADCYAP1	P18509	176 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	GPX4	P36969	197 aa	Predicted RBP	3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	OPRK1	P41145	380 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	UBE2E1	P51965	193 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	ATP5J2	P56134	94 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	DSCR9	P59020	149 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	RAB2A	P61019	212 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	AKR1C1	Q04828	323 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	WT1-AS	Q06250	92 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	PAX8	Q06710	450 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	PMS2P11	Q13670	270 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	EBI3	Q14213	229 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	PEA15	Q15121	130 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	ZNF726P1	Q15940	193 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	GUK1	Q16774	197 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	C10orf55	Q5SWW7	151 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	CCDC144NL	Q6NUI1	221 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	ACSM6	Q6P461	480 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	CLEC2A	Q6UVW9	174 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	PPP1R27	Q86WC6	154 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	DYNAP	Q8N1N2	210 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	RPP25L	Q8N5L8	163 aa	Known RBP	3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854		Q8N6K4	173 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	ZNF709	Q8N972	641 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	NPB	Q8NG41	125 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	OR10W1	Q8NGF6	305 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	CACNG8	Q8WXS5	425 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	MALSU1	Q96EH3	234 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	AJUBA	Q96IF1	538 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	P2RX4	Q99571	388 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	PBDC1	Q9BVG4	233 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	SEC11C	Q9BY50	192 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	SMDT1	Q9H4I9	107 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	TMEM231	Q9H6L2	316 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	TREM1	Q9NP99	234 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	KIAA1456	Q9P272	454 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	METTL1	Q9UBP6	276 aa	Known RBP	3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	CARHSP1	Q9Y2V2	147 aa	Known RBP	3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	LSM4	Q9Y4Z0	139 aa	Known RBP	3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	HILPDA	Q9Y5L2	63 aa		3.59	□□□□□ -1.83
ATP2C1-223	ENST00000515854	DIDO1	Q9BTC0	2240 aa	Known RBP	3.59	□□□□□ -1.84
ATP2C1-223	ENST00000515854	NBAS	A2RRP1	2371 aa		3.59	□□□□□ -1.84
ATP2C1-223	ENST00000515854	USF3	Q68DE3	2245 aa		3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	IGHV4-30-2	A0A087WSY4	118 aa		3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	TRAV20	A0A0B4J274	112 aa		3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	CTXND1	A0A1B0GTU2	59 aa		3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854		A0A1W2PRD5	423 aa		3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854		A0A1W2PRF3	423 aa		3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854		A0A1W2PRM7	423 aa		3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	IGLC7	A0M8Q6	106 aa		3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854		A1L4Q6	167 aa		3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	SMCO3	A2RU48	225 aa		3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	RBFOX3	A6NFN3	312 aa		3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	SEC14L6	B5MCN3	397 aa		3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	TEX22	C9J3V5	150 aa		3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854		F8W036	122 aa		3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	FCN1	O00602	326 aa		3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	NBR2	O15453	112 aa		3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	CYB5B	O43169	146 aa		3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	YIF1A	O95070	293 aa		3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	MOS	P00540	346 aa		3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	APOC3	P02656	99 aa		3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	SNRNP70	P08621	437 aa	Known RBP	3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	OR13C7	P0DN81	318 aa		3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	M6PR	P20645	277 aa		3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	RPL27A	P46776	148 aa	Known RBP	3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	RPL29	P47914	159 aa	Known RBP	3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	COMP	P49747	757 aa	Predicted RBP	3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	SUB1	P53999	127 aa	Known RBP eCLIP	3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	ELL	P55199	621 aa	Predicted RBP	3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	LGALS4	P56470	323 aa		3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	SSBP2	P81877	361 aa	Predicted RBP	3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	CD69	Q07108	199 aa		3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	GAMT	Q14353	236 aa		3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	SSX2	Q16385	188 aa		3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	TNXA	Q16473	311 aa		3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	TMEM249	Q2WGJ8	235 aa		3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	ACOT6	Q3I5F7	207 aa	Predicted RBP	3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	ZNF506	Q5JVG8	444 aa		3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	FFAR4	Q5NUL3	377 aa		3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	TEPP	Q6URK8	271 aa		3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	SSX7	Q7RTT5	188 aa		3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	TMEM144	Q7Z5S9	345 aa		3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	ZNF114	Q8NC26	417 aa		3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	OR10G4	Q8NGN3	311 aa		3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	OR10G9	Q8NGN4	311 aa		3.58	□□□□□ -1.84
ATP2C1-223	ENST00000515854	OR10G7	Q8NGN6	311 aa		3.58	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms