RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 TRBV20OR9-2A0A075B6H5 130 aa0.59□□□□□ -2.31
SMARCA5-203ENST00000515531 A0A0J9YY10 115 aa0.59□□□□□ -2.31
SMARCA5-203ENST00000515531 A0A1B0GX78 115 aa0.59□□□□□ -2.31
SMARCA5-203ENST00000515531 C19orf84I3L1E1 186 aa0.59□□□□□ -2.31
SMARCA5-203ENST00000515531 HTR1AP08908 422 aa0.59□□□□□ -2.31
SMARCA5-203ENST00000515531 ASAH2BP0C7U1 165 aa0.59□□□□□ -2.31
SMARCA5-203ENST00000515531 FKBP2P26885 142 aaKnown RBP0.59□□□□□ -2.31
SMARCA5-203ENST00000515531 MARCKSL1P49006 195 aa0.59□□□□□ -2.31
SMARCA5-203ENST00000515531 CCL20P78556 96 aa0.59□□□□□ -2.31
SMARCA5-203ENST00000515531 CLVS2Q5SYC1 327 aa0.59□□□□□ -2.31
SMARCA5-203ENST00000515531 AADACL3Q5VUY0 350 aa0.59□□□□□ -2.31
SMARCA5-203ENST00000515531 Q8N814 137 aa0.59□□□□□ -2.31
SMARCA5-203ENST00000515531 PIGXQ8TBF5 258 aa0.59□□□□□ -2.31
SMARCA5-203ENST00000515531 SCGB3A1Q96QR1 104 aa0.59□□□□□ -2.31
SMARCA5-203ENST00000515531 GINS4Q9BRT9 223 aa0.59□□□□□ -2.31
SMARCA5-203ENST00000515531 EXPH5Q8NEV8 1989 aa0.59□□□□□ -2.32
SMARCA5-203ENST00000515531 IGKV1D-42A0A075B6H8 117 aa0.58□□□□□ -2.32
SMARCA5-203ENST00000515531 A0A1B0GV50 99 aa0.58□□□□□ -2.32
SMARCA5-203ENST00000515531 MLLT11Q13015 90 aaPredicted RBP0.58□□□□□ -2.32
SMARCA5-203ENST00000515531 KISS1Q15726 138 aa0.58□□□□□ -2.32
SMARCA5-203ENST00000515531 SPANXN5Q5MJ07 72 aa0.58□□□□□ -2.32
SMARCA5-203ENST00000515531 DEFB128Q7Z7B8 93 aa0.58□□□□□ -2.32
SMARCA5-203ENST00000515531 OOSP2Q86WS3 158 aa0.58□□□□□ -2.32
SMARCA5-203ENST00000515531 IQCF2Q8IXL9 164 aa0.58□□□□□ -2.32
SMARCA5-203ENST00000515531 OR2T4Q8NH00 348 aa0.58□□□□□ -2.32
SMARCA5-203ENST00000515531 HEATR5AQ86XA9 2040 aa0.57□□□□□ -2.32
SMARCA5-203ENST00000515531 DCCP43146 1447 aa0.57□□□□□ -2.32
SMARCA5-203ENST00000515531 NCOA6Q14686 2063 aaPredicted RBP0.57□□□□□ -2.32
SMARCA5-203ENST00000515531 CCDC88AQ3V6T2 1871 aa0.57□□□□□ -2.32
SMARCA5-203ENST00000515531 COL4A5P29400 1685 aa0.57□□□□□ -2.32
SMARCA5-203ENST00000515531 COX5BP10606 129 aa0.57□□□□□ -2.32
SMARCA5-203ENST00000515531 CASQ1P31415 396 aa0.57□□□□□ -2.32
SMARCA5-203ENST00000515531 KCNJ8Q15842 424 aa0.57□□□□□ -2.32
SMARCA5-203ENST00000515531 LRRN1Q6UXK5 716 aa0.57□□□□□ -2.32
SMARCA5-203ENST00000515531 LINC00311Q8N616 119 aa0.57□□□□□ -2.32
SMARCA5-203ENST00000515531 DERL1Q9BUN8 251 aa0.57□□□□□ -2.32
SMARCA5-203ENST00000515531 CISHQ9NSE2 258 aa0.57□□□□□ -2.32
SMARCA5-203ENST00000515531 ALPK2Q86TB3 2170 aa0.56□□□□□ -2.32
SMARCA5-203ENST00000515531 GOLGA6L19H0YKK7 550 aa0.56□□□□□ -2.32
SMARCA5-203ENST00000515531 ACOX3O15254 700 aa0.56□□□□□ -2.32
SMARCA5-203ENST00000515531 OR2T1O43869 369 aa0.56□□□□□ -2.32
SMARCA5-203ENST00000515531 OR1I1O60431 355 aa0.56□□□□□ -2.32
SMARCA5-203ENST00000515531 CTSDP07339 412 aaPredicted RBP0.56□□□□□ -2.32
SMARCA5-203ENST00000515531 OCM2P0CE71 109 aa0.56□□□□□ -2.32
SMARCA5-203ENST00000515531 SPI1P17947 270 aa0.56□□□□□ -2.32
SMARCA5-203ENST00000515531 HIST1H2BOP23527 126 aa0.56□□□□□ -2.32
SMARCA5-203ENST00000515531 HIST1H2BBP33778 126 aa0.56□□□□□ -2.32
SMARCA5-203ENST00000515531 HIST1H2BDP58876 126 aa0.56□□□□□ -2.32
SMARCA5-203ENST00000515531 RAB4BP61018 213 aa0.56□□□□□ -2.32
SMARCA5-203ENST00000515531 HIST1H2BCP62807 126 aa0.56□□□□□ -2.32
SMARCA5-203ENST00000515531 GUK1Q16774 197 aa0.56□□□□□ -2.32
SMARCA5-203ENST00000515531 HIST2H2BEQ16778 126 aa0.56□□□□□ -2.32
SMARCA5-203ENST00000515531 SPANXN3Q5MJ09 141 aa0.56□□□□□ -2.32
SMARCA5-203ENST00000515531 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.56□□□□□ -2.32
SMARCA5-203ENST00000515531 OGFRL1Q5TC84 451 aaPredicted RBP0.56□□□□□ -2.32
SMARCA5-203ENST00000515531 RPL22L1Q6P5R6 122 aaKnown RBP0.56□□□□□ -2.32
SMARCA5-203ENST00000515531 DPPA3Q6W0C5 159 aa0.56□□□□□ -2.32
SMARCA5-203ENST00000515531 OR4E2Q8NGC2 313 aa0.56□□□□□ -2.32
SMARCA5-203ENST00000515531 HIST1H2BHQ93079 126 aa0.56□□□□□ -2.32
SMARCA5-203ENST00000515531 HIST1H2BNQ99877 126 aa0.56□□□□□ -2.32
SMARCA5-203ENST00000515531 HIST1H2BMQ99879 126 aa0.56□□□□□ -2.32
SMARCA5-203ENST00000515531 WDR61Q9GZS3 305 aaKnown RBP0.56□□□□□ -2.32
SMARCA5-203ENST00000515531 FGFR1OP2Q9NVK5 253 aa0.56□□□□□ -2.32
SMARCA5-203ENST00000515531 RALGAPA2Q2PPJ7 1873 aa0.55□□□□□ -2.32
SMARCA5-203ENST00000515531 C2orf70A6NJV1 201 aa0.55□□□□□ -2.32
SMARCA5-203ENST00000515531 EVPLLA8MZ36 301 aa0.55□□□□□ -2.32
SMARCA5-203ENST00000515531 M0QZ92 97 aa0.55□□□□□ -2.32
SMARCA5-203ENST00000515531 CXCR6O00574 342 aa0.55□□□□□ -2.32
SMARCA5-203ENST00000515531 NAA20P61599 178 aa0.55□□□□□ -2.32
SMARCA5-203ENST00000515531 TMED1Q13445 227 aa0.55□□□□□ -2.32
SMARCA5-203ENST00000515531 GDF5OSQ5U4N7 250 aa0.55□□□□□ -2.32
SMARCA5-203ENST00000515531 Q6ZQT0 140 aa0.55□□□□□ -2.32
SMARCA5-203ENST00000515531 Q6ZS49 121 aa0.55□□□□□ -2.32
SMARCA5-203ENST00000515531 BPIFA4PQ86YQ2 179 aa0.55□□□□□ -2.32
SMARCA5-203ENST00000515531 ZNF418Q8TF45 676 aaPredicted RBP0.55□□□□□ -2.32
SMARCA5-203ENST00000515531 DRC3Q9H069 523 aa0.55□□□□□ -2.32
SMARCA5-203ENST00000515531 A0A0A6YYH2 397 aa0.54□□□□□ -2.32
SMARCA5-203ENST00000515531 A6NJ64 397 aa0.54□□□□□ -2.32
SMARCA5-203ENST00000515531 INMT-MINDY4F8WBC2 141 aa0.54□□□□□ -2.32
SMARCA5-203ENST00000515531 CRYGAP11844 174 aa0.54□□□□□ -2.32
SMARCA5-203ENST00000515531 SBSPONQ8IVN8 264 aa0.54□□□□□ -2.32
SMARCA5-203ENST00000515531 PFN4Q8NHR9 129 aa0.54□□□□□ -2.32
SMARCA5-203ENST00000515531 MED12LQ86YW9 2145 aa0.53□□□□□ -2.32
SMARCA5-203ENST00000515531 A0A0D9SG52 128 aa0.53□□□□□ -2.32
SMARCA5-203ENST00000515531 CLDN25C9JDP6 229 aa0.53□□□□□ -2.32
SMARCA5-203ENST00000515531 H0Y980 276 aa0.53□□□□□ -2.32
SMARCA5-203ENST00000515531 M0QX08 132 aa0.53□□□□□ -2.32
SMARCA5-203ENST00000515531 RPS12P25398 132 aaKnown RBP0.53□□□□□ -2.32
SMARCA5-203ENST00000515531 PDE6HQ13956 83 aa0.53□□□□□ -2.32
SMARCA5-203ENST00000515531 CLVS1Q8IUQ0 354 aaPredicted RBP0.53□□□□□ -2.32
SMARCA5-203ENST00000515531 MRPL30Q8TCC3 161 aaKnown RBP0.53□□□□□ -2.32
SMARCA5-203ENST00000515531 RAB8BQ92930 207 aa0.53□□□□□ -2.32
SMARCA5-203ENST00000515531 TMEM147Q9BVK8 224 aa0.53□□□□□ -2.32
SMARCA5-203ENST00000515531 ULBP3Q9BZM4 244 aa0.53□□□□□ -2.32
SMARCA5-203ENST00000515531 RIC1Q4ADV7 1423 aa0.53□□□□□ -2.32
SMARCA5-203ENST00000515531 TOPBP1Q92547 1522 aa0.53□□□□□ -2.33
SMARCA5-203ENST00000515531 KHDC3LQ587J8 217 aa0.52□□□□□ -2.33
SMARCA5-203ENST00000515531 MIR17HGQ75NE6 70 aa0.52□□□□□ -2.33
SMARCA5-203ENST00000515531 Q8N6K4 173 aa0.52□□□□□ -2.33
SMARCA5-203ENST00000515531 AMELYQ99218 206 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms