RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 ATG12O94817 140 aa10.27□□□□□ -0.77
TCOF1-215ENST00000515516 GABARAPO95166 117 aa10.27□□□□□ -0.77
TCOF1-215ENST00000515516 RBMY1DP0C7P1 496 aaKnown RBP10.27□□□□□ -0.77
TCOF1-215ENST00000515516 C8orf88P0DMB2 117 aa10.27□□□□□ -0.77
TCOF1-215ENST00000515516 LAMTOR1Q6IAA8 161 aa10.27□□□□□ -0.77
TCOF1-215ENST00000515516 LINC00322Q6ZN03 302 aaPredicted RBP10.27□□□□□ -0.77
TCOF1-215ENST00000515516 OR1P1Q8NH06 330 aa10.27□□□□□ -0.77
TCOF1-215ENST00000515516 SCARB1Q8WTV0 552 aa10.27□□□□□ -0.77
TCOF1-215ENST00000515516 TMEM190Q8WZ59 177 aa10.27□□□□□ -0.77
TCOF1-215ENST00000515516 ZNF486Q96H40 463 aaPredicted RBP10.27□□□□□ -0.77
TCOF1-215ENST00000515516 C20orf24Q9BUV8 137 aa10.27□□□□□ -0.77
TCOF1-215ENST00000515516 NAA50Q9GZZ1 169 aaKnown RBP10.27□□□□□ -0.77
TCOF1-215ENST00000515516 WFDC10AQ9H1F0 79 aa10.27□□□□□ -0.77
TCOF1-215ENST00000515516 HIPK2Q9H2X6 1198 aa10.27□□□□□ -0.77
TCOF1-215ENST00000515516 TMEM14BQ9NUH8 114 aa10.27□□□□□ -0.77
TCOF1-215ENST00000515516 STAB2Q8WWQ8 2551 aa10.27□□□□□ -0.77
TCOF1-215ENST00000515516 NDUFA4O00483 81 aa10.26□□□□□ -0.77
TCOF1-215ENST00000515516 TBPP20226 339 aa10.26□□□□□ -0.77
TCOF1-215ENST00000515516 ERHP84090 104 aaKnown RBP10.26□□□□□ -0.77
TCOF1-215ENST00000515516 CTF1Q16619 201 aa10.26□□□□□ -0.77
TCOF1-215ENST00000515516 GPR141Q7Z602 305 aa10.26□□□□□ -0.77
TCOF1-215ENST00000515516 ARRDC1Q8N5I2 433 aa10.26□□□□□ -0.77
TCOF1-215ENST00000515516 OR2C3Q8N628 320 aa10.26□□□□□ -0.77
TCOF1-215ENST00000515516 OR52I2Q8NH67 350 aa10.26□□□□□ -0.77
TCOF1-215ENST00000515516 IL17DQ8TAD2 202 aa10.26□□□□□ -0.77
TCOF1-215ENST00000515516 MRGPRFQ96AM1 343 aa10.26□□□□□ -0.77
TCOF1-215ENST00000515516 MISP3Q96FF7 219 aa10.26□□□□□ -0.77
TCOF1-215ENST00000515516 SEC22AQ96IW7 307 aa10.26□□□□□ -0.77
TCOF1-215ENST00000515516 MRPS26Q9BYN8 205 aaKnown RBP10.26□□□□□ -0.77
TCOF1-215ENST00000515516 C5orf66Q9H5L9 145 aa10.26□□□□□ -0.77
TCOF1-215ENST00000515516 RETNQ9HD89 108 aa10.26□□□□□ -0.77
TCOF1-215ENST00000515516 DAZ1Q9NQZ3 744 aaKnown RBP10.26□□□□□ -0.77
TCOF1-215ENST00000515516 KLK11Q9UBX7 282 aa10.26□□□□□ -0.77
TCOF1-215ENST00000515516 NUPL2O15504 423 aaKnown RBP10.25□□□□□ -0.77
TCOF1-215ENST00000515516 RGS5O15539 181 aa10.25□□□□□ -0.77
TCOF1-215ENST00000515516 CD3DP04234 171 aa10.25□□□□□ -0.77
TCOF1-215ENST00000515516 SMIM18P0DKX4 95 aa10.25□□□□□ -0.77
TCOF1-215ENST00000515516 MFAP2P55001 183 aa10.25□□□□□ -0.77
TCOF1-215ENST00000515516 MFAP4P55083 255 aa10.25□□□□□ -0.77
TCOF1-215ENST00000515516 PIGPP57054 158 aa10.25□□□□□ -0.77
TCOF1-215ENST00000515516 RND3P61587 244 aa10.25□□□□□ -0.77
TCOF1-215ENST00000515516 HSPE1P61604 102 aaKnown RBP10.25□□□□□ -0.77
TCOF1-215ENST00000515516 PRCDQ00LT1 54 aa10.25□□□□□ -0.77
TCOF1-215ENST00000515516 RELQ04864 619 aaPredicted RBP10.25□□□□□ -0.77
TCOF1-215ENST00000515516 CCDC71LQ8N9Z2 235 aa10.25□□□□□ -0.77
TCOF1-215ENST00000515516 ZFAND1Q8TCF1 268 aa10.25□□□□□ -0.77
TCOF1-215ENST00000515516 SPAG8Q99932 426 aaPredicted RBP10.25□□□□□ -0.77
TCOF1-215ENST00000515516 GGTLC1Q9BX51 225 aa10.25□□□□□ -0.77
TCOF1-215ENST00000515516 COPZ2Q9P299 210 aa10.25□□□□□ -0.77
TCOF1-215ENST00000515516 MTFP1Q9UDX5 166 aa10.25□□□□□ -0.77
TCOF1-215ENST00000515516 LOC102724200A0A096LPH7 203 aaPredicted RBP10.24□□□□□ -0.77
TCOF1-215ENST00000515516 DBX1A6NMT0 343 aa10.24□□□□□ -0.77
TCOF1-215ENST00000515516 K7EIM0 57 aa10.24□□□□□ -0.77
TCOF1-215ENST00000515516 K7EMT4 169 aa10.24□□□□□ -0.77
TCOF1-215ENST00000515516 YIF1AO95070 293 aa10.24□□□□□ -0.77
TCOF1-215ENST00000515516 IGKV1-39P01597 117 aa10.24□□□□□ -0.77
TCOF1-215ENST00000515516 IGKV1D-39P04432 117 aa10.24□□□□□ -0.77
TCOF1-215ENST00000515516 PI3P19957 117 aa10.24□□□□□ -0.77
TCOF1-215ENST00000515516 AKR1C2P52895 323 aa10.24□□□□□ -0.77
TCOF1-215ENST00000515516 TAS2R19P59542 299 aa10.24□□□□□ -0.77
TCOF1-215ENST00000515516 TRIM16LQ309B1 348 aa10.24□□□□□ -0.77
TCOF1-215ENST00000515516 SCGB2B2Q4G0G5 96 aa10.24□□□□□ -0.77
TCOF1-215ENST00000515516 TMEM229BQ8NBD8 167 aa10.24□□□□□ -0.77
TCOF1-215ENST00000515516 TXN2Q99757 166 aa10.24□□□□□ -0.77
TCOF1-215ENST00000515516 FAM110AQ9BQ89 295 aa10.24□□□□□ -0.77
TCOF1-215ENST00000515516 CHRDL1Q9BU40 450 aa10.24□□□□□ -0.77
TCOF1-215ENST00000515516 PDCD10Q9BUL8 212 aa10.24□□□□□ -0.77
TCOF1-215ENST00000515516 C3orf85A0A1B0GTC6 90 aa10.23□□□□□ -0.77
TCOF1-215ENST00000515516 C15orf62A8K5M9 175 aa10.23□□□□□ -0.77
TCOF1-215ENST00000515516 RAB3DO95716 219 aa10.23□□□□□ -0.77
TCOF1-215ENST00000515516 IFNA17P01571 189 aa10.23□□□□□ -0.77
TCOF1-215ENST00000515516 SNCAP37840 140 aa10.23□□□□□ -0.77
TCOF1-215ENST00000515516 PPP5CP53041 499 aa10.23□□□□□ -0.77
TCOF1-215ENST00000515516 MRPS10P82664 201 aaKnown RBP10.23□□□□□ -0.77
TCOF1-215ENST00000515516 LHFPL1Q86WI0 220 aa10.23□□□□□ -0.77
TCOF1-215ENST00000515516 TERB2Q8NHR7 220 aa10.23□□□□□ -0.77
TCOF1-215ENST00000515516 RNASE11Q8TAA1 199 aaKnown RBP10.23□□□□□ -0.77
TCOF1-215ENST00000515516 PINX1Q96BK5 328 aaKnown RBP10.23□□□□□ -0.77
TCOF1-215ENST00000515516 ABHD1Q96SE0 405 aa10.23□□□□□ -0.77
TCOF1-215ENST00000515516 IGHV3OR16-8A0A075B7F1 116 aa10.22□□□□□ -0.77
TCOF1-215ENST00000515516 OR4C46A6NHA9 309 aa10.22□□□□□ -0.77
TCOF1-215ENST00000515516 GABARAPH6UMI1 98 aa10.22□□□□□ -0.77
TCOF1-215ENST00000515516 TSPAN4O14817 238 aa10.22□□□□□ -0.77
TCOF1-215ENST00000515516 ZNF207O43670 478 aaKnown RBP10.22□□□□□ -0.77
TCOF1-215ENST00000515516 GNG7O60262 68 aa10.22□□□□□ -0.77
TCOF1-215ENST00000515516 B3GALNT1O75752 331 aa10.22□□□□□ -0.77
TCOF1-215ENST00000515516 MT-CO2P00403 227 aa10.22□□□□□ -0.77
TCOF1-215ENST00000515516 CTSGP08311 255 aa10.22□□□□□ -0.77
TCOF1-215ENST00000515516 SUB1P53999 127 aaKnown RBP eCLIP10.22□□□□□ -0.77
TCOF1-215ENST00000515516 STEAP1BQ6NZ63 245 aa10.22□□□□□ -0.77
TCOF1-215ENST00000515516 SLC35G3Q8N808 338 aa10.22□□□□□ -0.77
TCOF1-215ENST00000515516 ZNF114Q8NC26 417 aa10.22□□□□□ -0.77
TCOF1-215ENST00000515516 RRNAD1Q96FB5 475 aaKnown RBP10.22□□□□□ -0.77
TCOF1-215ENST00000515516 ENY2Q9NPA8 101 aa10.22□□□□□ -0.77
TCOF1-215ENST00000515516 DNAH7Q8WXX0 4024 aa10.22□□□□□ -0.77
TCOF1-215ENST00000515516 F8W735 103 aaPredicted RBP10.21□□□□□ -0.77
TCOF1-215ENST00000515516 I3L2K1 104 aa10.21□□□□□ -0.77
TCOF1-215ENST00000515516 ADMP35318 185 aa10.21□□□□□ -0.77
TCOF1-215ENST00000515516 NPBWR1P48145 328 aa10.21□□□□□ -0.77
TCOF1-215ENST00000515516 APOC4P55056 127 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms