RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 WDR82Q6UXN9 313 aa10.57□□□□□ -0.72
SMAD1-215ENST00000515385 NUP35Q8NFH5 326 aa10.57□□□□□ -0.72
SMAD1-215ENST00000515385 DPF1Q92782 380 aa10.57□□□□□ -0.72
SMAD1-215ENST00000515385 CDX2Q99626 313 aaPredicted RBP10.57□□□□□ -0.72
SMAD1-215ENST00000515385 HSPB8Q9UJY1 196 aa10.57□□□□□ -0.72
SMAD1-215ENST00000515385 BRCA2P51587 3418 aa10.57□□□□□ -0.72
SMAD1-215ENST00000515385 RTTNQ86VV8 2226 aa10.57□□□□□ -0.72
SMAD1-215ENST00000515385 NGFP01138 241 aa10.57□□□□□ -0.72
SMAD1-215ENST00000515385 OR9G9P0C7N8 305 aa10.57□□□□□ -0.72
SMAD1-215ENST00000515385 ZNF146Q15072 292 aa10.57□□□□□ -0.72
SMAD1-215ENST00000515385 GDF5OSQ5U4N7 250 aa10.57□□□□□ -0.72
SMAD1-215ENST00000515385 UBALD1Q8TB05 177 aa10.57□□□□□ -0.72
SMAD1-215ENST00000515385 LINC00470Q9BZP3 86 aa10.57□□□□□ -0.72
SMAD1-215ENST00000515385 CRISPLD2Q9H0B8 497 aa10.57□□□□□ -0.72
SMAD1-215ENST00000515385 SOX21Q9Y651 276 aaPredicted RBP10.57□□□□□ -0.72
SMAD1-215ENST00000515385 A0A087X0K7 114 aa10.56□□□□□ -0.72
SMAD1-215ENST00000515385 DUTP33316 252 aaKnown RBP10.56□□□□□ -0.72
SMAD1-215ENST00000515385 ERVK11-1P61568 191 aa10.56□□□□□ -0.72
SMAD1-215ENST00000515385 GABRA6Q16445 453 aa10.56□□□□□ -0.72
SMAD1-215ENST00000515385 WIPI1Q5MNZ9 446 aaPredicted RBP10.56□□□□□ -0.72
SMAD1-215ENST00000515385 PRAMEF5Q5TYX0 476 aa10.56□□□□□ -0.72
SMAD1-215ENST00000515385 PRAMEF6Q5VXH4 476 aa10.56□□□□□ -0.72
SMAD1-215ENST00000515385 MIR17HGQ75NE6 70 aa10.56□□□□□ -0.72
SMAD1-215ENST00000515385 TMEM251Q8N6I4 163 aa10.56□□□□□ -0.72
SMAD1-215ENST00000515385 H1FXQ92522 213 aaKnown RBP10.56□□□□□ -0.72
SMAD1-215ENST00000515385 C1orf159Q96HA4 380 aa10.56□□□□□ -0.72
SMAD1-215ENST00000515385 URB1-AS1Q96HZ7 61 aa10.56□□□□□ -0.72
SMAD1-215ENST00000515385 JKAMPQ9P055 326 aa10.56□□□□□ -0.72
SMAD1-215ENST00000515385 DUSP13Q9UII6 198 aa10.56□□□□□ -0.72
SMAD1-215ENST00000515385 IGHV1-24A0A0C4DH33 117 aa10.56□□□□□ -0.72
SMAD1-215ENST00000515385 A0A1B0GXF2 115 aa10.56□□□□□ -0.72
SMAD1-215ENST00000515385 HIST1H1EP10412 219 aaKnown RBP10.56□□□□□ -0.72
SMAD1-215ENST00000515385 SLC23A3Q6PIS1 610 aa10.56□□□□□ -0.72
SMAD1-215ENST00000515385 FAM214BQ7L5A3 538 aa10.56□□□□□ -0.72
SMAD1-215ENST00000515385 OR2K2Q8NGT1 345 aa10.56□□□□□ -0.72
SMAD1-215ENST00000515385 RTL8AQ9BWD3 113 aa10.56□□□□□ -0.72
SMAD1-215ENST00000515385 PHF7Q9BWX1 381 aaPredicted RBP10.56□□□□□ -0.72
SMAD1-215ENST00000515385 C12orf77C9JDV5 145 aa10.55□□□□□ -0.72
SMAD1-215ENST00000515385 SEC16AO15027 2179 aa10.55□□□□□ -0.72
SMAD1-215ENST00000515385 RHBDL1O75783 438 aa10.55□□□□□ -0.72
SMAD1-215ENST00000515385 CCL3P10147 92 aa10.55□□□□□ -0.72
SMAD1-215ENST00000515385 ERVK-16P61578 105 aa10.55□□□□□ -0.72
SMAD1-215ENST00000515385 FNDC4Q9H6D8 234 aaPredicted RBP10.55□□□□□ -0.72
SMAD1-215ENST00000515385 PROK2Q9HC23 129 aa10.55□□□□□ -0.72
SMAD1-215ENST00000515385 GCM1Q9NP62 436 aa10.55□□□□□ -0.72
SMAD1-215ENST00000515385 OCIAD1Q9NX40 245 aa10.55□□□□□ -0.72
SMAD1-215ENST00000515385 PILRBQ9UKJ0 227 aa10.55□□□□□ -0.72
SMAD1-215ENST00000515385 A0A1W2PR77 199 aa10.54□□□□□ -0.72
SMAD1-215ENST00000515385 OR11H12B2RN74 326 aa10.54□□□□□ -0.72
SMAD1-215ENST00000515385 GGTLC3B5MD39 225 aa10.54□□□□□ -0.72
SMAD1-215ENST00000515385 CXCL13O43927 109 aa10.54□□□□□ -0.72
SMAD1-215ENST00000515385 TSPAN13O95857 204 aa10.54□□□□□ -0.72
SMAD1-215ENST00000515385 MYF5P13349 255 aa10.54□□□□□ -0.72
SMAD1-215ENST00000515385 B3GALT5-AS1P59052 145 aa10.54□□□□□ -0.72
SMAD1-215ENST00000515385 OR1C1Q15619 314 aa10.54□□□□□ -0.72
SMAD1-215ENST00000515385 C2orf91Q6ZV80 131 aa10.54□□□□□ -0.72
SMAD1-215ENST00000515385 SYT13Q7L8C5 426 aa10.54□□□□□ -0.72
SMAD1-215ENST00000515385 OR11H1Q8NG94 326 aa10.54□□□□□ -0.72
SMAD1-215ENST00000515385 OR11H2Q8NH07 326 aa10.54□□□□□ -0.72
SMAD1-215ENST00000515385 FER1L6-AS2Q96M78 137 aa10.54□□□□□ -0.72
SMAD1-215ENST00000515385 IDI2-AS1Q9NZ38 188 aa10.54□□□□□ -0.72
SMAD1-215ENST00000515385 LINC00473A8K010 186 aa10.54□□□□□ -0.72
SMAD1-215ENST00000515385 APOA2P02652 100 aa10.54□□□□□ -0.72
SMAD1-215ENST00000515385 SSR4P51571 173 aa10.54□□□□□ -0.72
SMAD1-215ENST00000515385 HBBP68871 147 aa10.54□□□□□ -0.72
SMAD1-215ENST00000515385 LINC01545Q5VT33 79 aa10.54□□□□□ -0.72
SMAD1-215ENST00000515385 GGNQ86UU5 652 aa10.54□□□□□ -0.72
SMAD1-215ENST00000515385 OR10AG1Q8NH19 301 aa10.54□□□□□ -0.72
SMAD1-215ENST00000515385 VSTM2AQ8TAG5 236 aa10.54□□□□□ -0.72
SMAD1-215ENST00000515385 FAM168AQ92567 244 aa10.54□□□□□ -0.72
SMAD1-215ENST00000515385 NABP2Q9BQ15 211 aa10.54□□□□□ -0.72
SMAD1-215ENST00000515385 NPFFR1Q9GZQ6 430 aa10.54□□□□□ -0.72
SMAD1-215ENST00000515385 WDR54Q9H977 334 aa10.54□□□□□ -0.72
SMAD1-215ENST00000515385 TP73-AS1Q9UF72 201 aa10.54□□□□□ -0.72
SMAD1-215ENST00000515385 KMT2EQ8IZD2 1858 aa10.54□□□□□ -0.72
SMAD1-215ENST00000515385 PSMB11A5LHX3 300 aa10.53□□□□□ -0.72
SMAD1-215ENST00000515385 CA1P00915 261 aaPredicted RBP10.53□□□□□ -0.72
SMAD1-215ENST00000515385 CD27P26842 260 aa10.53□□□□□ -0.72
SMAD1-215ENST00000515385 PLP1P60201 277 aa10.53□□□□□ -0.72
SMAD1-215ENST00000515385 PLP2Q04941 152 aa10.53□□□□□ -0.72
SMAD1-215ENST00000515385 TMEM240Q5SV17 173 aa10.53□□□□□ -0.72
SMAD1-215ENST00000515385 SHISA2Q6UWI4 295 aa10.53□□□□□ -0.72
SMAD1-215ENST00000515385 ZNF841Q6ZN19 808 aa10.53□□□□□ -0.72
SMAD1-215ENST00000515385 SNRNP40Q96DI7 357 aaKnown RBP10.53□□□□□ -0.72
SMAD1-215ENST00000515385 SSBP3Q9BWW4 388 aaPredicted RBP10.53□□□□□ -0.72
SMAD1-215ENST00000515385 ZNF355PQ9NSJ1 428 aa10.53□□□□□ -0.72
SMAD1-215ENST00000515385 PCDH15Q96QU1 1955 aa10.53□□□□□ -0.72
SMAD1-215ENST00000515385 FER1L5A0AVI2 2057 aa10.53□□□□□ -0.72
SMAD1-215ENST00000515385 KLRC4-KLRK1H3BQV0 150 aa10.53□□□□□ -0.72
SMAD1-215ENST00000515385 SCRG1O75711 98 aa10.53□□□□□ -0.72
SMAD1-215ENST00000515385 SP1P08047 785 aa10.53□□□□□ -0.72
SMAD1-215ENST00000515385 ZXDAP98168 799 aa10.53□□□□□ -0.72
SMAD1-215ENST00000515385 ABHD12Q8N2K0 398 aa10.53□□□□□ -0.72
SMAD1-215ENST00000515385 MRAP2Q96G30 205 aa10.53□□□□□ -0.72
SMAD1-215ENST00000515385 MRPL32Q9BYC8 188 aaKnown RBP10.53□□□□□ -0.72
SMAD1-215ENST00000515385 TCF19Q9Y242 345 aa10.53□□□□□ -0.72
SMAD1-215ENST00000515385 A0A0G2JLM5 398 aa10.52□□□□□ -0.73
SMAD1-215ENST00000515385 TMEM189A5PLL7 270 aa10.52□□□□□ -0.73
SMAD1-215ENST00000515385 HIGD1CA8MV81 97 aa10.52□□□□□ -0.73
SMAD1-215ENST00000515385 SIVA1O15304 175 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms