RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 RXFP4Q8TDU9 374 aa12□□□□□ -0.49
VCAN-211ENST00000513984 RAB24Q969Q5 203 aa12□□□□□ -0.49
VCAN-211ENST00000513984 SIRPDQ9H106 197 aa12□□□□□ -0.49
VCAN-211ENST00000513984 PXMP4Q9Y6I8 212 aa12□□□□□ -0.49
VCAN-211ENST00000513984 TIMM23O14925 209 aa12□□□□□ -0.49
VCAN-211ENST00000513984 VENTXO95231 258 aa12□□□□□ -0.49
VCAN-211ENST00000513984 IFNA1P01562 189 aa12□□□□□ -0.49
VCAN-211ENST00000513984 CDC34P49427 236 aaPredicted RBP12□□□□□ -0.49
VCAN-211ENST00000513984 PDLIM4P50479 330 aa12□□□□□ -0.49
VCAN-211ENST00000513984 CD69Q07108 199 aa12□□□□□ -0.49
VCAN-211ENST00000513984 SOHLH1Q5JUK2 328 aa12□□□□□ -0.49
VCAN-211ENST00000513984 TMEM144Q7Z5S9 345 aa12□□□□□ -0.49
VCAN-211ENST00000513984 ZNF843Q8N446 348 aa12□□□□□ -0.49
VCAN-211ENST00000513984 CFHR4Q92496 578 aa12□□□□□ -0.49
VCAN-211ENST00000513984 TACC2O95359 2948 aa11.99□□□□□ -0.49
VCAN-211ENST00000513984 FLNCQ14315 2725 aa11.99□□□□□ -0.49
VCAN-211ENST00000513984 ZFP92A6NM28 416 aa11.99□□□□□ -0.49
VCAN-211ENST00000513984 HOXB4P17483 251 aaPredicted RBP11.99□□□□□ -0.49
VCAN-211ENST00000513984 RPL29P47914 159 aaKnown RBP11.99□□□□□ -0.49
VCAN-211ENST00000513984 LCN2P80188 198 aa11.99□□□□□ -0.49
VCAN-211ENST00000513984 RAB31Q13636 194 aa11.99□□□□□ -0.49
VCAN-211ENST00000513984 MIC13Q5XKP0 118 aa11.99□□□□□ -0.49
VCAN-211ENST00000513984 CACNG8Q8WXS5 425 aa11.99□□□□□ -0.49
VCAN-211ENST00000513984 CCL19Q99731 98 aa11.99□□□□□ -0.49
VCAN-211ENST00000513984 METTL1Q9UBP6 276 aaKnown RBP11.99□□□□□ -0.49
VCAN-211ENST00000513984 IGLC7A0M8Q6 106 aa11.98□□□□□ -0.49
VCAN-211ENST00000513984 EIF3GO75821 320 aaKnown RBP eCLIP11.98□□□□□ -0.49
VCAN-211ENST00000513984 GPX4P36969 197 aaPredicted RBP11.98□□□□□ -0.49
VCAN-211ENST00000513984 RPL27AP46776 148 aaKnown RBP11.98□□□□□ -0.49
VCAN-211ENST00000513984 COMPP49747 757 aaPredicted RBP11.98□□□□□ -0.49
VCAN-211ENST00000513984 SUB1P53999 127 aaKnown RBP eCLIP11.98□□□□□ -0.49
VCAN-211ENST00000513984 B2MP61769 119 aa11.98□□□□□ -0.49
VCAN-211ENST00000513984 GAMTQ14353 236 aa11.98□□□□□ -0.49
VCAN-211ENST00000513984 TMEM249Q2WGJ8 235 aa11.98□□□□□ -0.49
VCAN-211ENST00000513984 GCSAMLQ5JQS6 135 aa11.98□□□□□ -0.49
VCAN-211ENST00000513984 LHFPL4Q7Z7J7 247 aa11.98□□□□□ -0.49
VCAN-211ENST00000513984 PPP1R27Q86WC6 154 aa11.98□□□□□ -0.49
VCAN-211ENST00000513984 MRPL41Q8IXM3 137 aaKnown RBP11.98□□□□□ -0.49
VCAN-211ENST00000513984 RNASEH2CQ8TDP1 164 aaKnown RBP11.98□□□□□ -0.49
VCAN-211ENST00000513984 P2RX4Q99571 388 aa11.98□□□□□ -0.49
VCAN-211ENST00000513984 VAX2Q9UIW0 290 aa11.98□□□□□ -0.49
VCAN-211ENST00000513984 ZFYVE26Q68DK2 2539 aa11.98□□□□□ -0.49
VCAN-211ENST00000513984 MED13LQ71F56 2210 aa11.98□□□□□ -0.49
VCAN-211ENST00000513984 OOSP1A8MZH6 123 aa11.97□□□□□ -0.49
VCAN-211ENST00000513984 NUPL2O15504 423 aaKnown RBP11.97□□□□□ -0.49
VCAN-211ENST00000513984 ACTL6BO94805 426 aa11.97□□□□□ -0.49
VCAN-211ENST00000513984 DEFA4P12838 97 aa11.97□□□□□ -0.49
VCAN-211ENST00000513984 PRR20EP86478 221 aa11.97□□□□□ -0.49
VCAN-211ENST00000513984 PRR20CP86479 221 aa11.97□□□□□ -0.49
VCAN-211ENST00000513984 PRR20DP86480 221 aa11.97□□□□□ -0.49
VCAN-211ENST00000513984 PRR20BP86481 221 aa11.97□□□□□ -0.49
VCAN-211ENST00000513984 PRR20AP86496 221 aa11.97□□□□□ -0.49
VCAN-211ENST00000513984 TNXAQ16473 311 aa11.97□□□□□ -0.49
VCAN-211ENST00000513984 MINOS1Q5TGZ0 78 aa11.97□□□□□ -0.49
VCAN-211ENST00000513984 RBMS3Q6XE24 437 aaKnown RBP11.97□□□□□ -0.49
VCAN-211ENST00000513984 STPG3Q8N7X2 389 aa11.97□□□□□ -0.49
VCAN-211ENST00000513984 CYB561D1Q8N8Q1 229 aa11.97□□□□□ -0.49
VCAN-211ENST00000513984 ZNF114Q8NC26 417 aa11.97□□□□□ -0.49
VCAN-211ENST00000513984 HILPDAQ9Y5L2 63 aa11.97□□□□□ -0.49
VCAN-211ENST00000513984 MINOS1-NBL1R4GNA1 71 aa11.97□□□□□ -0.49
VCAN-211ENST00000513984 HMGB3O15347 200 aaKnown RBP11.97□□□□□ -0.49
VCAN-211ENST00000513984 FBP1P09467 338 aa11.97□□□□□ -0.49
VCAN-211ENST00000513984 TAGLN2P37802 199 aaKnown RBP11.97□□□□□ -0.49
VCAN-211ENST00000513984 PVRIGQ6DKI7 326 aa11.97□□□□□ -0.49
VCAN-211ENST00000513984 SLC16A13Q7RTY0 426 aa11.97□□□□□ -0.49
VCAN-211ENST00000513984 SSMEM1Q8WWF3 244 aa11.97□□□□□ -0.49
VCAN-211ENST00000513984 POLR3KQ9Y2Y1 108 aaPredicted RBP11.97□□□□□ -0.49
VCAN-211ENST00000513984 ABCA2Q9BZC7 2435 aa11.97□□□□□ -0.49
VCAN-211ENST00000513984 COL12A1Q99715 3063 aa11.96□□□□□ -0.49
VCAN-211ENST00000513984 IGKV1OR2-108A0A075B7D4 117 aa11.96□□□□□ -0.49
VCAN-211ENST00000513984 NDUFS6O75380 124 aaKnown RBP11.96□□□□□ -0.49
VCAN-211ENST00000513984 FOXH1O75593 365 aa11.96□□□□□ -0.49
VCAN-211ENST00000513984 AWAT1Q58HT5 328 aa11.96□□□□□ -0.49
VCAN-211ENST00000513984 CCDC144NLQ6NUI1 221 aa11.96□□□□□ -0.49
VCAN-211ENST00000513984 TMEM88Q6PEY1 159 aa11.96□□□□□ -0.49
VCAN-211ENST00000513984 TMPRSS5Q9H3S3 457 aa11.96□□□□□ -0.49
VCAN-211ENST00000513984 FBXL15Q9H469 300 aa11.96□□□□□ -0.49
VCAN-211ENST00000513984 MANBALQ9NQG1 85 aa11.96□□□□□ -0.49
VCAN-211ENST00000513984 SLC45A2Q9UMX9 530 aa11.96□□□□□ -0.49
VCAN-211ENST00000513984 A0A1W2PPV4 95 aa11.95□□□□□ -0.5
VCAN-211ENST00000513984 NDUFA3O95167 84 aa11.95□□□□□ -0.5
VCAN-211ENST00000513984 MOSP00540 346 aa11.95□□□□□ -0.5
VCAN-211ENST00000513984 SSBP2P81877 361 aaPredicted RBP11.95□□□□□ -0.5
VCAN-211ENST00000513984 CBLN2Q8IUK8 224 aa11.95□□□□□ -0.5
VCAN-211ENST00000513984 NPBQ8NG41 125 aa11.95□□□□□ -0.5
VCAN-211ENST00000513984 SLC35E1Q96K37 410 aa11.95□□□□□ -0.5
VCAN-211ENST00000513984 MYO18BQ8IUG5 2567 aa11.95□□□□□ -0.5
VCAN-211ENST00000513984 TEX22C9J3V5 150 aa11.95□□□□□ -0.5
VCAN-211ENST00000513984 TOX4O94842 621 aa11.95□□□□□ -0.5
VCAN-211ENST00000513984 LINC00869P0C866 280 aa11.95□□□□□ -0.5
VCAN-211ENST00000513984 PSMB3P49720 205 aa11.95□□□□□ -0.5
VCAN-211ENST00000513984 MEF2BQ02080 365 aaPredicted RBP11.95□□□□□ -0.5
VCAN-211ENST00000513984 MMDQ15546 238 aa11.95□□□□□ -0.5
VCAN-211ENST00000513984 MLANAQ16655 118 aa11.95□□□□□ -0.5
VCAN-211ENST00000513984 FAM90A2PQ658T7 463 aa11.95□□□□□ -0.5
VCAN-211ENST00000513984 SLC35E3Q7Z769 313 aa11.95□□□□□ -0.5
VCAN-211ENST00000513984 TBX15Q96SF7 602 aa11.95□□□□□ -0.5
VCAN-211ENST00000513984 PIMREGQ9BSJ6 248 aa11.95□□□□□ -0.5
VCAN-211ENST00000513984 FNDC4Q9H6D8 234 aaPredicted RBP11.95□□□□□ -0.5
VCAN-211ENST00000513984 TBL2Q9Y4P3 447 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms