RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 TNXAQ16473 311 aa7.99□□□□□ -1.13
VCAN-210ENST00000513960 SSX8Q7RTT4 187 aa7.99□□□□□ -1.13
VCAN-210ENST00000513960 LEAP2Q969E1 77 aa7.99□□□□□ -1.13
VCAN-210ENST00000513960 MGST2Q99735 147 aa7.99□□□□□ -1.13
VCAN-210ENST00000513960 TNRC6AQ8NDV7 1962 aaKnown RBP7.99□□□□□ -1.13
VCAN-210ENST00000513960 LINC00473A8K010 186 aa7.99□□□□□ -1.13
VCAN-210ENST00000513960 TOX4O94842 621 aa7.99□□□□□ -1.13
VCAN-210ENST00000513960 HLA-DQA1P01909 254 aa7.99□□□□□ -1.13
VCAN-210ENST00000513960 STAG3L2P0CL84 134 aa7.99□□□□□ -1.13
VCAN-210ENST00000513960 STAG3L3P0CL85 134 aa7.99□□□□□ -1.13
VCAN-210ENST00000513960 IGFBP2P18065 325 aa7.99□□□□□ -1.13
VCAN-210ENST00000513960 CA7P43166 264 aa7.99□□□□□ -1.13
VCAN-210ENST00000513960 ALKBH6Q3KRA9 238 aa7.99□□□□□ -1.13
VCAN-210ENST00000513960 TEPPQ6URK8 271 aa7.99□□□□□ -1.13
VCAN-210ENST00000513960 SLC25A40Q8TBP6 338 aa7.99□□□□□ -1.13
VCAN-210ENST00000513960 TSKUQ8WUA8 353 aa7.99□□□□□ -1.13
VCAN-210ENST00000513960 GGTLC1Q9BX51 225 aa7.99□□□□□ -1.13
VCAN-210ENST00000513960 CDC42EP3Q9UKI2 254 aa7.99□□□□□ -1.13
VCAN-210ENST00000513960 SMPD2O60906 423 aa7.99□□□□□ -1.13
VCAN-210ENST00000513960 CCL11P51671 97 aa7.99□□□□□ -1.13
VCAN-210ENST00000513960 UBE2G1P62253 170 aa7.99□□□□□ -1.13
VCAN-210ENST00000513960 Q6P435 159 aa7.99□□□□□ -1.13
VCAN-210ENST00000513960 TRIB1Q96RU8 372 aa7.99□□□□□ -1.13
VCAN-210ENST00000513960 S1PR3Q99500 378 aa7.99□□□□□ -1.13
VCAN-210ENST00000513960 COL27A1Q8IZC6 1860 aaPredicted RBP7.99□□□□□ -1.13
VCAN-210ENST00000513960 TRAV3A0A0B4J244 114 aa7.98□□□□□ -1.13
VCAN-210ENST00000513960 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.98□□□□□ -1.13
VCAN-210ENST00000513960 PSPNO60542 156 aa7.98□□□□□ -1.13
VCAN-210ENST00000513960 YPEL1O60688 119 aa7.98□□□□□ -1.13
VCAN-210ENST00000513960 AMMECR1LQ6DCA0 310 aa7.98□□□□□ -1.13
VCAN-210ENST00000513960 YPEL2Q96QA6 119 aa7.98□□□□□ -1.13
VCAN-210ENST00000513960 NAA38Q9BRA0 125 aaKnown RBP7.98□□□□□ -1.13
VCAN-210ENST00000513960 IL19Q9UHD0 177 aa7.98□□□□□ -1.13
VCAN-210ENST00000513960 PCNX2A6NKB5 2137 aa7.98□□□□□ -1.13
VCAN-210ENST00000513960 hDV102S1A0JD36 115 aa7.98□□□□□ -1.13
VCAN-210ENST00000513960 OR2T8A6NH00 312 aa7.98□□□□□ -1.13
VCAN-210ENST00000513960 FABP6P51161 128 aa7.98□□□□□ -1.13
VCAN-210ENST00000513960 TRIP6Q15654 476 aaKnown RBP7.98□□□□□ -1.13
VCAN-210ENST00000513960 EFNB3Q15768 340 aa7.98□□□□□ -1.13
VCAN-210ENST00000513960 ANKRD39Q53RE8 183 aa7.98□□□□□ -1.13
VCAN-210ENST00000513960 RPL39P5Q59GN2 51 aa7.98□□□□□ -1.13
VCAN-210ENST00000513960 ZNF497Q6ZNH5 498 aa7.98□□□□□ -1.13
VCAN-210ENST00000513960 GNB1LQ9BYB4 327 aa7.98□□□□□ -1.13
VCAN-210ENST00000513960 NPVFQ9HCQ7 196 aa7.98□□□□□ -1.13
VCAN-210ENST00000513960 OR4C46A6NHA9 309 aa7.98□□□□□ -1.13
VCAN-210ENST00000513960 BMPR1BO00238 502 aa7.98□□□□□ -1.13
VCAN-210ENST00000513960 PLAUP00749 431 aa7.98□□□□□ -1.13
VCAN-210ENST00000513960 IGHV3-48P01763 117 aa7.98□□□□□ -1.13
VCAN-210ENST00000513960 IGHV1-2P23083 117 aa7.98□□□□□ -1.13
VCAN-210ENST00000513960 CD24P25063 80 aa7.98□□□□□ -1.13
VCAN-210ENST00000513960 NPY1RP25929 384 aa7.98□□□□□ -1.13
VCAN-210ENST00000513960 COMPP49747 757 aaPredicted RBP7.98□□□□□ -1.13
VCAN-210ENST00000513960 Q0VG73 95 aa7.98□□□□□ -1.13
VCAN-210ENST00000513960 KMT2EQ8IZD2 1858 aa7.98□□□□□ -1.13
VCAN-210ENST00000513960 ABCA1O95477 2261 aa7.97□□□□□ -1.13
VCAN-210ENST00000513960 MYOD1P15172 320 aa7.97□□□□□ -1.13
VCAN-210ENST00000513960 IGLL1P15814 213 aa7.97□□□□□ -1.13
VCAN-210ENST00000513960 OPRK1P41145 380 aa7.97□□□□□ -1.13
VCAN-210ENST00000513960 UBE2L3P68036 154 aaKnown RBP7.97□□□□□ -1.13
VCAN-210ENST00000513960 C19orf35Q6ZS72 473 aa7.97□□□□□ -1.13
VCAN-210ENST00000513960 TPPP3Q9BW30 176 aa7.97□□□□□ -1.13
VCAN-210ENST00000513960 TRAV9-2A0A087WT02 112 aa7.97□□□□□ -1.13
VCAN-210ENST00000513960 A0A1W2PN81 502 aa7.97□□□□□ -1.13
VCAN-210ENST00000513960 OOEPA6NGQ2 149 aa7.97□□□□□ -1.13
VCAN-210ENST00000513960 ITGB1BP1O14713 200 aa7.97□□□□□ -1.13
VCAN-210ENST00000513960 TIMM8AO60220 97 aaPredicted RBP7.97□□□□□ -1.13
VCAN-210ENST00000513960 PRB4P10163 310 aaPredicted RBP7.97□□□□□ -1.13
VCAN-210ENST00000513960 INO80CQ6PI98 192 aaPredicted RBP7.97□□□□□ -1.13
VCAN-210ENST00000513960 FAM214BQ7L5A3 538 aa7.97□□□□□ -1.13
VCAN-210ENST00000513960 WDR86Q86TI4 376 aa7.97□□□□□ -1.13
VCAN-210ENST00000513960 OR8B3Q8NGG8 313 aa7.97□□□□□ -1.13
VCAN-210ENST00000513960 LINC00479Q96M42 142 aa7.97□□□□□ -1.13
VCAN-210ENST00000513960 TMEM11P17152 192 aa7.97□□□□□ -1.13
VCAN-210ENST00000513960 TMEM136Q6ZRR5 245 aa7.97□□□□□ -1.13
VCAN-210ENST00000513960 OR13A1Q8NGR1 328 aa7.97□□□□□ -1.13
VCAN-210ENST00000513960 V9GYV3 84 aa7.97□□□□□ -1.13
VCAN-210ENST00000513960 MED12LQ86YW9 2145 aa7.97□□□□□ -1.13
VCAN-210ENST00000513960 TRBV9A0A0B4J1U6 114 aa7.96□□□□□ -1.13
VCAN-210ENST00000513960 PMS2P5A8MQ11 134 aa7.96□□□□□ -1.13
VCAN-210ENST00000513960 ZNF891A8MT65 544 aaPredicted RBP7.96□□□□□ -1.13
VCAN-210ENST00000513960 NPIPB11E5RHQ5 1161 aa7.96□□□□□ -1.13
VCAN-210ENST00000513960 SLAQ13239 276 aa7.96□□□□□ -1.13
VCAN-210ENST00000513960 BLNKQ8WV28 456 aa7.96□□□□□ -1.13
VCAN-210ENST00000513960 TCF19Q9Y242 345 aa7.96□□□□□ -1.13
VCAN-210ENST00000513960 MUC3AQ02505 3323 aa7.96□□□□□ -1.13
VCAN-210ENST00000513960 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.96□□□□□ -1.13
VCAN-210ENST00000513960 ZNF146Q15072 292 aa7.96□□□□□ -1.13
VCAN-210ENST00000513960 PRR14LQ5THK1 2151 aa7.96□□□□□ -1.13
VCAN-210ENST00000513960 MOB3BQ86TA1 216 aa7.96□□□□□ -1.13
VCAN-210ENST00000513960 TXNDC17Q9BRA2 123 aa7.96□□□□□ -1.13
VCAN-210ENST00000513960 TMEM140Q9NV12 185 aa7.96□□□□□ -1.13
VCAN-210ENST00000513960 IGHV2OR16-5A0A0B4J2B6 119 aa7.96□□□□□ -1.14
VCAN-210ENST00000513960 MUC21A0A0G2JKD1 596 aa7.96□□□□□ -1.14
VCAN-210ENST00000513960 MUC21A0A140T8X8 626 aa7.96□□□□□ -1.14
VCAN-210ENST00000513960 NKX2-8O15522 239 aa7.96□□□□□ -1.14
VCAN-210ENST00000513960 MPDU1O75352 247 aa7.96□□□□□ -1.14
VCAN-210ENST00000513960 CDKN1BP46527 198 aa7.96□□□□□ -1.14
VCAN-210ENST00000513960 ERVK11-1P61568 191 aa7.96□□□□□ -1.14
VCAN-210ENST00000513960 CX3CL1P78423 397 aa7.96□□□□□ -1.14
VCAN-210ENST00000513960 MUC21Q5SSG8 566 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms