RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 FAM209BQ5JX69 171 aa4.96□□□□□ -1.62
KDM3B-208ENST00000512928 CTRB2Q6GPI1 263 aa4.96□□□□□ -1.62
KDM3B-208ENST00000512928 LCN12Q6JVE5 192 aa4.96□□□□□ -1.62
KDM3B-208ENST00000512928 SLC25A24Q6NUK1 477 aa4.96□□□□□ -1.62
KDM3B-208ENST00000512928 FAAP20Q6NZ36 180 aa4.96□□□□□ -1.62
KDM3B-208ENST00000512928 H2BFWTQ7Z2G1 175 aa4.96□□□□□ -1.62
KDM3B-208ENST00000512928 UBAC2Q8NBM4 344 aa4.96□□□□□ -1.62
KDM3B-208ENST00000512928 OR1L8Q8NGR8 309 aa4.96□□□□□ -1.62
KDM3B-208ENST00000512928 OR4A16Q8NH70 328 aa4.96□□□□□ -1.62
KDM3B-208ENST00000512928 RNASE11Q8TAA1 199 aaKnown RBP4.96□□□□□ -1.62
KDM3B-208ENST00000512928 LSM10Q969L4 123 aaKnown RBP4.96□□□□□ -1.62
KDM3B-208ENST00000512928 CXorf58Q96LI9 332 aa4.96□□□□□ -1.62
KDM3B-208ENST00000512928 CCDC140Q96MF4 163 aa4.96□□□□□ -1.62
KDM3B-208ENST00000512928 FANCD2OSQ96PS1 177 aa4.96□□□□□ -1.62
KDM3B-208ENST00000512928 WDR12Q9GZL7 423 aaKnown RBP4.96□□□□□ -1.62
KDM3B-208ENST00000512928 THYN1Q9P016 225 aa4.96□□□□□ -1.62
KDM3B-208ENST00000512928 PRNDQ9UKY0 176 aa4.96□□□□□ -1.62
KDM3B-208ENST00000512928 U3KQK5 164 aa4.96□□□□□ -1.62
KDM3B-208ENST00000512928 IGLV11-55A0A075B6I3 123 aa4.95□□□□□ -1.62
KDM3B-208ENST00000512928 TRBV7-1A0A0A6YYK4 115 aa4.95□□□□□ -1.62
KDM3B-208ENST00000512928 IGHV3-35A0A0C4DH35 117 aa4.95□□□□□ -1.62
KDM3B-208ENST00000512928 NAP1L6A6NFF2 107 aa4.95□□□□□ -1.62
KDM3B-208ENST00000512928 C15orf61A6NNL5 157 aa4.95□□□□□ -1.62
KDM3B-208ENST00000512928 UPK1BO75841 260 aa4.95□□□□□ -1.62
KDM3B-208ENST00000512928 CLEC3BP05452 202 aa4.95□□□□□ -1.62
KDM3B-208ENST00000512928 CTSDP07339 412 aaPredicted RBP4.95□□□□□ -1.62
KDM3B-208ENST00000512928 CSN3P07498 182 aa4.95□□□□□ -1.62
KDM3B-208ENST00000512928 EDN2P20800 178 aa4.95□□□□□ -1.62
KDM3B-208ENST00000512928 PIGPP57054 158 aa4.95□□□□□ -1.62
KDM3B-208ENST00000512928 AP3S2P59780 193 aa4.95□□□□□ -1.62
KDM3B-208ENST00000512928 DHODHQ02127 395 aa4.95□□□□□ -1.62
KDM3B-208ENST00000512928 WT1-ASQ06250 92 aa4.95□□□□□ -1.62
KDM3B-208ENST00000512928 TRIM16LQ309B1 348 aa4.95□□□□□ -1.62
KDM3B-208ENST00000512928 FAM106AQ4KMX7 169 aa4.95□□□□□ -1.62
KDM3B-208ENST00000512928 AARDQ4LEZ3 155 aa4.95□□□□□ -1.62
KDM3B-208ENST00000512928 ZNF585BQ52M93 769 aa4.95□□□□□ -1.62
KDM3B-208ENST00000512928 Q56UQ5 140 aa4.95□□□□□ -1.62
KDM3B-208ENST00000512928 SPINK9Q5DT21 86 aa4.95□□□□□ -1.62
KDM3B-208ENST00000512928 THOC7Q6I9Y2 204 aaKnown RBP4.95□□□□□ -1.62
KDM3B-208ENST00000512928 PLET1Q6UQ28 207 aa4.95□□□□□ -1.62
KDM3B-208ENST00000512928 IL34Q6ZMJ4 242 aa4.95□□□□□ -1.62
KDM3B-208ENST00000512928 HSD17B13Q7Z5P4 300 aaPredicted RBP4.95□□□□□ -1.62
KDM3B-208ENST00000512928 IQCF2Q8IXL9 164 aa4.95□□□□□ -1.62
KDM3B-208ENST00000512928 TOMM5Q8N4H5 51 aa4.95□□□□□ -1.62
KDM3B-208ENST00000512928 OR51S1Q8NGJ8 323 aa4.95□□□□□ -1.62
KDM3B-208ENST00000512928 CACNG8Q8WXS5 425 aa4.95□□□□□ -1.62
KDM3B-208ENST00000512928 TMEM230Q96A57 120 aa4.95□□□□□ -1.62
KDM3B-208ENST00000512928 GALNT14Q96FL9 552 aa4.95□□□□□ -1.62
KDM3B-208ENST00000512928 TMEM56Q96MV1 263 aa4.95□□□□□ -1.62
KDM3B-208ENST00000512928 TSC22D3Q99576 134 aa4.95□□□□□ -1.62
KDM3B-208ENST00000512928 PRRT1Q99946 306 aa4.95□□□□□ -1.62
KDM3B-208ENST00000512928 SRSF8Q9BRL6 282 aaKnown RBP4.95□□□□□ -1.62
KDM3B-208ENST00000512928 RTBDNQ9BSG5 229 aaPredicted RBP4.95□□□□□ -1.62
KDM3B-208ENST00000512928 C5orf66Q9H5L9 145 aa4.95□□□□□ -1.62
KDM3B-208ENST00000512928 TUBA4BQ9H853 241 aa4.95□□□□□ -1.62
KDM3B-208ENST00000512928 FKBP11Q9NYL4 201 aa4.95□□□□□ -1.62
KDM3B-208ENST00000512928 COPZ2Q9P299 210 aa4.95□□□□□ -1.62
KDM3B-208ENST00000512928 GPR132Q9UNW8 380 aa4.95□□□□□ -1.62
KDM3B-208ENST00000512928 TEX13DA0A0J9YY54 714 aaPredicted RBP4.94□□□□□ -1.62
KDM3B-208ENST00000512928 C3orf85A0A1B0GTC6 90 aa4.94□□□□□ -1.62
KDM3B-208ENST00000512928 IZUMO1RA6ND01 250 aa4.94□□□□□ -1.62
KDM3B-208ENST00000512928 OR2T8A6NH00 312 aa4.94□□□□□ -1.62
KDM3B-208ENST00000512928 C2orf70A6NJV1 201 aa4.94□□□□□ -1.62
KDM3B-208ENST00000512928 DBX1A6NMT0 343 aa4.94□□□□□ -1.62
KDM3B-208ENST00000512928 DISC1C4P0D8 188 aa4.94□□□□□ -1.62
KDM3B-208ENST00000512928 B3GALNT1O75752 331 aa4.94□□□□□ -1.62
KDM3B-208ENST00000512928 ATG12O94817 140 aa4.94□□□□□ -1.62
KDM3B-208ENST00000512928 NDUFB6O95139 128 aa4.94□□□□□ -1.62
KDM3B-208ENST00000512928 IGKV1-39P01597 117 aa4.94□□□□□ -1.62
KDM3B-208ENST00000512928 IGKV1D-39P04432 117 aa4.94□□□□□ -1.62
KDM3B-208ENST00000512928 IGHV4-30-4P0DP06 118 aa4.94□□□□□ -1.62
KDM3B-208ENST00000512928 FOLR2P14207 255 aa4.94□□□□□ -1.62
KDM3B-208ENST00000512928 SMCPP49901 116 aaPredicted RBP4.94□□□□□ -1.62
KDM3B-208ENST00000512928 CD81P60033 236 aa4.94□□□□□ -1.62
KDM3B-208ENST00000512928 SUPT4H1P63272 117 aaKnown RBP4.94□□□□□ -1.62
KDM3B-208ENST00000512928 ZNF846Q147U1 533 aa4.94□□□□□ -1.62
KDM3B-208ENST00000512928 IZUMO4Q1ZYL8 232 aa4.94□□□□□ -1.62
KDM3B-208ENST00000512928 KLK9Q2XQG4 91 aa4.94□□□□□ -1.62
KDM3B-208ENST00000512928 SP6Q3SY56 376 aa4.94□□□□□ -1.62
KDM3B-208ENST00000512928 CD300EQ496F6 205 aaPredicted RBP4.94□□□□□ -1.62
KDM3B-208ENST00000512928 SBSPONQ8IVN8 264 aa4.94□□□□□ -1.62
KDM3B-208ENST00000512928 CCDC71LQ8N9Z2 235 aa4.94□□□□□ -1.62
KDM3B-208ENST00000512928 OR5B3Q8NH48 314 aa4.94□□□□□ -1.62
KDM3B-208ENST00000512928 ZFAND1Q8TCF1 268 aa4.94□□□□□ -1.62
KDM3B-208ENST00000512928 MARCH1Q8TCQ1 289 aa4.94□□□□□ -1.62
KDM3B-208ENST00000512928 PINX1Q96BK5 328 aaKnown RBP4.94□□□□□ -1.62
KDM3B-208ENST00000512928 MISP3Q96FF7 219 aa4.94□□□□□ -1.62
KDM3B-208ENST00000512928 WWC2-AS2Q96NR7 200 aa4.94□□□□□ -1.62
KDM3B-208ENST00000512928 TP53RKQ96S44 253 aa4.94□□□□□ -1.62
KDM3B-208ENST00000512928 SLC25A21Q9BQT8 299 aaPredicted RBP4.94□□□□□ -1.62
KDM3B-208ENST00000512928 PDCD10Q9BUL8 212 aa4.94□□□□□ -1.62
KDM3B-208ENST00000512928 C20orf24Q9BUV8 137 aa4.94□□□□□ -1.62
KDM3B-208ENST00000512928 ZMAT4Q9H898 229 aa4.94□□□□□ -1.62
KDM3B-208ENST00000512928 PLEKHA3Q9HB20 300 aa4.94□□□□□ -1.62
KDM3B-208ENST00000512928 PALMDQ9NP74 551 aa4.94□□□□□ -1.62
KDM3B-208ENST00000512928 NDUFA4L2Q9NRX3 87 aa4.94□□□□□ -1.62
KDM3B-208ENST00000512928 MCUBQ9NWR8 336 aa4.94□□□□□ -1.62
KDM3B-208ENST00000512928 KLK9Q9UKQ9 250 aa4.94□□□□□ -1.62
KDM3B-208ENST00000512928 C14orf166Q9Y224 244 aaKnown RBP4.94□□□□□ -1.62
KDM3B-208ENST00000512928 DMRT1Q9Y5R6 373 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms