RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 DLX1P56177 255 aa7.27□□□□□ -1.25
NR1I3-228ENST00000511676 EXOSC2Q13868 293 aaKnown RBP7.27□□□□□ -1.25
NR1I3-228ENST00000511676 MMDQ15546 238 aa7.27□□□□□ -1.25
NR1I3-228ENST00000511676 SSX2Q16385 188 aa7.27□□□□□ -1.25
NR1I3-228ENST00000511676 C5orf64Q2M2E5 130 aa7.27□□□□□ -1.25
NR1I3-228ENST00000511676 VWC2Q2TAL6 325 aa7.27□□□□□ -1.25
NR1I3-228ENST00000511676 C2orf83Q53S99 150 aa7.27□□□□□ -1.25
NR1I3-228ENST00000511676 SPANXN5Q5MJ07 72 aa7.27□□□□□ -1.25
NR1I3-228ENST00000511676 PRR31Q5SQ13 230 aa7.27□□□□□ -1.25
NR1I3-228ENST00000511676 C16orf82Q7Z2V1 217 aa7.27□□□□□ -1.25
NR1I3-228ENST00000511676 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.27□□□□□ -1.25
NR1I3-228ENST00000511676 SLC24A4Q8NFF2 622 aa7.27□□□□□ -1.25
NR1I3-228ENST00000511676 OR10P1Q8NGE3 313 aa7.27□□□□□ -1.25
NR1I3-228ENST00000511676 GINS3Q9BRX5 216 aa7.27□□□□□ -1.25
NR1I3-228ENST00000511676 SLC25A32Q9H2D1 315 aa7.27□□□□□ -1.25
NR1I3-228ENST00000511676 ZNF430Q9H8G1 570 aaPredicted RBP7.27□□□□□ -1.25
NR1I3-228ENST00000511676 METTL1Q9UBP6 276 aaKnown RBP7.27□□□□□ -1.25
NR1I3-228ENST00000511676 PITPNC1Q9UKF7 332 aa7.27□□□□□ -1.25
NR1I3-228ENST00000511676 TRAV40A0A0B4J280 105 aa7.26□□□□□ -1.25
NR1I3-228ENST00000511676 C15orf62A8K5M9 175 aa7.26□□□□□ -1.25
NR1I3-228ENST00000511676 M0QZK8 103 aa7.26□□□□□ -1.25
NR1I3-228ENST00000511676 CORTO00230 105 aa7.26□□□□□ -1.25
NR1I3-228ENST00000511676 FGF16O43320 207 aa7.26□□□□□ -1.25
NR1I3-228ENST00000511676 IFNA5P01569 189 aa7.26□□□□□ -1.25
NR1I3-228ENST00000511676 IGKV1D-33P01593 117 aa7.26□□□□□ -1.25
NR1I3-228ENST00000511676 IGKV1-33P01594 117 aa7.26□□□□□ -1.25
NR1I3-228ENST00000511676 HLA-DRB1P01911 266 aa7.26□□□□□ -1.25
NR1I3-228ENST00000511676 NPY1RP25929 384 aa7.26□□□□□ -1.25
NR1I3-228ENST00000511676 RPL27AP46776 148 aaKnown RBP7.26□□□□□ -1.25
NR1I3-228ENST00000511676 SUB1P53999 127 aaKnown RBP eCLIP7.26□□□□□ -1.25
NR1I3-228ENST00000511676 RAB14P61106 215 aa7.26□□□□□ -1.25
NR1I3-228ENST00000511676 RPL15P61313 204 aaKnown RBP7.26□□□□□ -1.25
NR1I3-228ENST00000511676 DLK1P80370 383 aa7.26□□□□□ -1.25
NR1I3-228ENST00000511676 ERHP84090 104 aaKnown RBP7.26□□□□□ -1.25
NR1I3-228ENST00000511676 NHLH2Q02577 135 aa7.26□□□□□ -1.25
NR1I3-228ENST00000511676 SLC38A11Q08AI6 406 aa7.26□□□□□ -1.25
NR1I3-228ENST00000511676 CLLU1Q5K131 121 aa7.26□□□□□ -1.25
NR1I3-228ENST00000511676 PVRIGQ6DKI7 326 aa7.26□□□□□ -1.25
NR1I3-228ENST00000511676 ZNF562Q6V9R5 426 aa7.26□□□□□ -1.25
NR1I3-228ENST00000511676 LILRB2Q8N423 598 aa7.26□□□□□ -1.25
NR1I3-228ENST00000511676 OR1L6Q8NGR2 347 aa7.26□□□□□ -1.25
NR1I3-228ENST00000511676 OR5C1Q8NGR4 320 aa7.26□□□□□ -1.25
NR1I3-228ENST00000511676 RNASEH2CQ8TDP1 164 aaKnown RBP7.26□□□□□ -1.25
NR1I3-228ENST00000511676 OR4C12Q96R67 309 aa7.26□□□□□ -1.25
NR1I3-228ENST00000511676 TMEM147Q9BVK8 224 aa7.26□□□□□ -1.25
NR1I3-228ENST00000511676 IGHV3-72A0A0B4J1Y9 119 aa7.25□□□□□ -1.25
NR1I3-228ENST00000511676 PMS2P5A8MQ11 134 aa7.25□□□□□ -1.25
NR1I3-228ENST00000511676 UMAD1C9J7I0 102 aa7.25□□□□□ -1.25
NR1I3-228ENST00000511676 PRSS46E5RG02 174 aa7.25□□□□□ -1.25
NR1I3-228ENST00000511676 CLDN34H7C241 214 aa7.25□□□□□ -1.25
NR1I3-228ENST00000511676 IFNA10P01566 189 aa7.25□□□□□ -1.25
NR1I3-228ENST00000511676 METTL15P1P0C7V9 234 aa7.25□□□□□ -1.25
NR1I3-228ENST00000511676 SPP1P10451 314 aa7.25□□□□□ -1.25
NR1I3-228ENST00000511676 TMEM11P17152 192 aa7.25□□□□□ -1.25
NR1I3-228ENST00000511676 SNCAP37840 140 aa7.25□□□□□ -1.25
NR1I3-228ENST00000511676 MRGPRG-AS1Q2M3A8 158 aa7.25□□□□□ -1.25
NR1I3-228ENST00000511676 RPL7L1Q6DKI1 246 aaKnown RBP7.25□□□□□ -1.25
NR1I3-228ENST00000511676 DYNAPQ8N1N2 210 aa7.25□□□□□ -1.25
NR1I3-228ENST00000511676 CACNG8Q8WXS5 425 aa7.25□□□□□ -1.25
NR1I3-228ENST00000511676 SAT2Q96F10 170 aaPredicted RBP7.25□□□□□ -1.25
NR1I3-228ENST00000511676 TMEM68Q96MH6 324 aa7.25□□□□□ -1.25
NR1I3-228ENST00000511676 PSMG3Q9BT73 122 aaPredicted RBP7.25□□□□□ -1.25
NR1I3-228ENST00000511676 KCNIP2Q9NS61 270 aa7.25□□□□□ -1.25
NR1I3-228ENST00000511676 UQCC1Q9NVA1 299 aa7.25□□□□□ -1.25
NR1I3-228ENST00000511676 MED9Q9NWA0 146 aa7.25□□□□□ -1.25
NR1I3-228ENST00000511676 FAM96BQ9Y3D0 163 aa7.25□□□□□ -1.25
NR1I3-228ENST00000511676 TIMM9Q9Y5J7 89 aa7.25□□□□□ -1.25
NR1I3-228ENST00000511676 IGLC7A0M8Q6 106 aa7.24□□□□□ -1.25
NR1I3-228ENST00000511676 H3BP45 60 aa7.24□□□□□ -1.25
NR1I3-228ENST00000511676 CYB5BO43169 146 aa7.24□□□□□ -1.25
NR1I3-228ENST00000511676 KCNAB3O43448 404 aa7.24□□□□□ -1.25
NR1I3-228ENST00000511676 CST7O76096 145 aa7.24□□□□□ -1.25
NR1I3-228ENST00000511676 NXPH3O95157 252 aa7.24□□□□□ -1.25
NR1I3-228ENST00000511676 CFDP00746 253 aaPredicted RBP7.24□□□□□ -1.25
NR1I3-228ENST00000511676 MDKP21741 143 aaPredicted RBP7.24□□□□□ -1.25
NR1I3-228ENST00000511676 GPX4P36969 197 aaPredicted RBP7.24□□□□□ -1.25
NR1I3-228ENST00000511676 SERF2P84101 59 aa7.24□□□□□ -1.25
NR1I3-228ENST00000511676 HES1Q14469 280 aa7.24□□□□□ -1.25
NR1I3-228ENST00000511676 PLGLAQ15195 96 aa7.24□□□□□ -1.25
NR1I3-228ENST00000511676 TNXAQ16473 311 aa7.24□□□□□ -1.25
NR1I3-228ENST00000511676 LRRC75BQ2VPJ9 315 aa7.24□□□□□ -1.25
NR1I3-228ENST00000511676 AWAT1Q58HT5 328 aa7.24□□□□□ -1.25
NR1I3-228ENST00000511676 KLF17Q5JT82 389 aaPredicted RBP7.24□□□□□ -1.25
NR1I3-228ENST00000511676 DPPA3Q6W0C5 159 aa7.24□□□□□ -1.25
NR1I3-228ENST00000511676 ETV3LQ6ZN32 361 aa7.24□□□□□ -1.25
NR1I3-228ENST00000511676 CENPVQ7Z7K6 275 aaPredicted RBP7.24□□□□□ -1.25
NR1I3-228ENST00000511676 OR2G3Q8NGZ4 309 aa7.24□□□□□ -1.25
NR1I3-228ENST00000511676 RNF141Q8WVD5 230 aa7.24□□□□□ -1.25
NR1I3-228ENST00000511676 FBXL15Q9H469 300 aa7.24□□□□□ -1.25
NR1I3-228ENST00000511676 PRDM13Q9H4Q3 707 aa7.24□□□□□ -1.25
NR1I3-228ENST00000511676 ZNF580Q9UK33 172 aa7.24□□□□□ -1.25
NR1I3-228ENST00000511676 RPS10-NUDT3A0A1W2PQS6 291 aa7.23□□□□□ -1.25
NR1I3-228ENST00000511676 A0A1W2PRD5 423 aa7.23□□□□□ -1.25
NR1I3-228ENST00000511676 A0A1W2PRF3 423 aa7.23□□□□□ -1.25
NR1I3-228ENST00000511676 A0A1W2PRM7 423 aa7.23□□□□□ -1.25
NR1I3-228ENST00000511676 CGB1A6NKQ9 187 aa7.23□□□□□ -1.25
NR1I3-228ENST00000511676 NUDT19A8MXV4 375 aa7.23□□□□□ -1.25
NR1I3-228ENST00000511676 TEX22C9J3V5 150 aa7.23□□□□□ -1.25
NR1I3-228ENST00000511676 RNASE2P10153 161 aaKnown RBP7.23□□□□□ -1.25
NR1I3-228ENST00000511676 SULT1A2P50226 295 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms