RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 STPG3Q8N7X2 389 aa12□□□□□ -0.49
PHF3-209ENST00000509330 OR1L8Q8NGR8 309 aa12□□□□□ -0.49
PHF3-209ENST00000509330 NEU4Q8WWR8 484 aaPredicted RBP12□□□□□ -0.49
PHF3-209ENST00000509330 FBXL15Q9H469 300 aa12□□□□□ -0.49
PHF3-209ENST00000509330 URGCP-MRPS24S4R325 110 aa12□□□□□ -0.49
PHF3-209ENST00000509330 POLQO75417 2590 aa11.99□□□□□ -0.49
PHF3-209ENST00000509330 IGKV1OR2-108A0A075B7D4 117 aa11.99□□□□□ -0.49
PHF3-209ENST00000509330 TRAV1-1A0A0B4J248 108 aa11.99□□□□□ -0.49
PHF3-209ENST00000509330 RNASE2P10153 161 aaKnown RBP11.99□□□□□ -0.49
PHF3-209ENST00000509330 USF1P22415 310 aaPredicted RBP11.99□□□□□ -0.49
PHF3-209ENST00000509330 RAB13P51153 203 aa11.99□□□□□ -0.49
PHF3-209ENST00000509330 SSBP2P81877 361 aaPredicted RBP11.99□□□□□ -0.49
PHF3-209ENST00000509330 DTX2Q86UW9 622 aa11.99□□□□□ -0.49
PHF3-209ENST00000509330 OR4F5Q8NH21 305 aa11.99□□□□□ -0.49
PHF3-209ENST00000509330 OR5B3Q8NH48 314 aa11.99□□□□□ -0.49
PHF3-209ENST00000509330 OR4F4Q96R69 305 aa11.99□□□□□ -0.49
PHF3-209ENST00000509330 NDUFA4L2Q9NRX3 87 aa11.99□□□□□ -0.49
PHF3-209ENST00000509330 ZNF257Q9Y2Q1 563 aa11.99□□□□□ -0.49
PHF3-209ENST00000509330 CYB5BO43169 146 aa11.99□□□□□ -0.49
PHF3-209ENST00000509330 DLK1P80370 383 aa11.99□□□□□ -0.49
PHF3-209ENST00000509330 PLGLAQ15195 96 aa11.99□□□□□ -0.49
PHF3-209ENST00000509330 VMA21Q3ZAQ7 101 aa11.99□□□□□ -0.49
PHF3-209ENST00000509330 FBLN7Q53RD9 439 aa11.99□□□□□ -0.49
PHF3-209ENST00000509330 ZNF596Q8TC21 504 aa11.99□□□□□ -0.49
PHF3-209ENST00000509330 ABHD5Q8WTS1 349 aa11.99□□□□□ -0.49
PHF3-209ENST00000509330 PCGF1Q9BSM1 259 aa11.99□□□□□ -0.49
PHF3-209ENST00000509330 SEPSECSQ9HD40 501 aaKnown RBP11.99□□□□□ -0.49
PHF3-209ENST00000509330 MBP02144 154 aa11.98□□□□□ -0.49
PHF3-209ENST00000509330 TAGLN2P37802 199 aaKnown RBP11.98□□□□□ -0.49
PHF3-209ENST00000509330 OR5T1Q8NG75 326 aa11.98□□□□□ -0.49
PHF3-209ENST00000509330 C2CD4CQ8TF44 421 aa11.98□□□□□ -0.49
PHF3-209ENST00000509330 C17orf50Q8WW18 174 aa11.98□□□□□ -0.49
PHF3-209ENST00000509330 NIPSNAP3BQ9BS92 247 aa11.98□□□□□ -0.49
PHF3-209ENST00000509330 FKBP11Q9NYL4 201 aa11.98□□□□□ -0.49
PHF3-209ENST00000509330 A0A1W2PPI3 338 aa11.98□□□□□ -0.49
PHF3-209ENST00000509330 TIMM23O14925 209 aa11.98□□□□□ -0.49
PHF3-209ENST00000509330 OPRK1P41145 380 aa11.98□□□□□ -0.49
PHF3-209ENST00000509330 CD81P60033 236 aa11.98□□□□□ -0.49
PHF3-209ENST00000509330 CST9LP1Q5W188 147 aa11.98□□□□□ -0.49
PHF3-209ENST00000509330 FAM24BQ8N5W8 94 aa11.98□□□□□ -0.49
PHF3-209ENST00000509330 TMEM167AQ8TBQ9 72 aa11.98□□□□□ -0.49
PHF3-209ENST00000509330 BPESC1Q9GZL8 116 aa11.98□□□□□ -0.49
PHF3-209ENST00000509330 METTL1Q9UBP6 276 aaKnown RBP11.98□□□□□ -0.49
PHF3-209ENST00000509330 SNRPCP09234 159 aaKnown RBP11.97□□□□□ -0.49
PHF3-209ENST00000509330 AREGP15514 252 aa11.97□□□□□ -0.49
PHF3-209ENST00000509330 ZNF137PP52743 207 aa11.97□□□□□ -0.49
PHF3-209ENST00000509330 ERHP84090 104 aaKnown RBP11.97□□□□□ -0.49
PHF3-209ENST00000509330 GAMTQ14353 236 aa11.97□□□□□ -0.49
PHF3-209ENST00000509330 SSX2Q16385 188 aa11.97□□□□□ -0.49
PHF3-209ENST00000509330 FAM90A2PQ658T7 463 aa11.97□□□□□ -0.49
PHF3-209ENST00000509330 VAX2Q9UIW0 290 aa11.97□□□□□ -0.49
PHF3-209ENST00000509330 hCG_1809904A0A1W2PP81 198 aa11.97□□□□□ -0.49
PHF3-209ENST00000509330 A0A1W2PR64 198 aa11.97□□□□□ -0.49
PHF3-209ENST00000509330 A0A1W2PRV1 198 aa11.97□□□□□ -0.49
PHF3-209ENST00000509330 FCN1O00602 326 aa11.97□□□□□ -0.49
PHF3-209ENST00000509330 FOXH1O75593 365 aa11.97□□□□□ -0.49
PHF3-209ENST00000509330 ARL14EPLP0DKL9 152 aa11.97□□□□□ -0.49
PHF3-209ENST00000509330 OR10J1P30954 320 aa11.97□□□□□ -0.49
PHF3-209ENST00000509330 MC5RP33032 325 aa11.97□□□□□ -0.49
PHF3-209ENST00000509330 HES1Q14469 280 aa11.97□□□□□ -0.49
PHF3-209ENST00000509330 RUSC1-AS1Q66K80 236 aa11.97□□□□□ -0.49
PHF3-209ENST00000509330 OR51G1Q8NGK1 321 aa11.97□□□□□ -0.49
PHF3-209ENST00000509330 VSTM2AQ8TAG5 236 aa11.97□□□□□ -0.49
PHF3-209ENST00000509330 SMCO4Q9NRQ5 59 aa11.97□□□□□ -0.49
PHF3-209ENST00000509330 DOK5Q9P104 306 aa11.97□□□□□ -0.49
PHF3-209ENST00000509330 LSM4Q9Y4Z0 139 aaKnown RBP11.97□□□□□ -0.49
PHF3-209ENST00000509330 A6NNC1 897 aa11.97□□□□□ -0.49
PHF3-209ENST00000509330 IFNA1P01562 189 aa11.97□□□□□ -0.49
PHF3-209ENST00000509330 MEF2BQ02080 365 aaPredicted RBP11.97□□□□□ -0.49
PHF3-209ENST00000509330 C8orf31Q8N9H6 132 aa11.97□□□□□ -0.49
PHF3-209ENST00000509330 AURKAIP1Q9NWT8 199 aaPredicted RBP11.97□□□□□ -0.49
PHF3-209ENST00000509330 ATP5G3P48201 142 aa11.96□□□□□ -0.49
PHF3-209ENST00000509330 PSMB3P49720 205 aa11.96□□□□□ -0.49
PHF3-209ENST00000509330 MRGPRG-AS1Q2M3A8 158 aa11.96□□□□□ -0.49
PHF3-209ENST00000509330 ZNF343Q6P1L6 599 aa11.96□□□□□ -0.49
PHF3-209ENST00000509330 MISP3Q96FF7 219 aa11.96□□□□□ -0.49
PHF3-209ENST00000509330 CRYBA1P05813 215 aa11.96□□□□□ -0.5
PHF3-209ENST00000509330 MMDQ15546 238 aa11.96□□□□□ -0.5
PHF3-209ENST00000509330 SLC35E3Q7Z769 313 aa11.96□□□□□ -0.5
PHF3-209ENST00000509330 P2RX4Q99571 388 aa11.96□□□□□ -0.5
PHF3-209ENST00000509330 FAM103A1Q9BTL3 118 aaKnown RBP11.96□□□□□ -0.5
PHF3-209ENST00000509330 FNDC4Q9H6D8 234 aaPredicted RBP11.96□□□□□ -0.5
PHF3-209ENST00000509330 MRPL36Q9P0J6 103 aaKnown RBP11.96□□□□□ -0.5
PHF3-209ENST00000509330 PSG5Q15238 335 aa11.95□□□□□ -0.5
PHF3-209ENST00000509330 FAM78BQ5VT40 261 aa11.95□□□□□ -0.5
PHF3-209ENST00000509330 FAM71F2Q6NXP2 309 aa11.95□□□□□ -0.5
PHF3-209ENST00000509330 VMO1Q7Z5L0 202 aa11.95□□□□□ -0.5
PHF3-209ENST00000509330 LY6G5BQ8NDX9 201 aa11.95□□□□□ -0.5
PHF3-209ENST00000509330 GGACTQ9BVM4 153 aa11.95□□□□□ -0.5
PHF3-209ENST00000509330 MLXQ9UH92 298 aa11.95□□□□□ -0.5
PHF3-209ENST00000509330 COLCA2A8K830 154 aa11.95□□□□□ -0.5
PHF3-209ENST00000509330 LY86O95711 162 aa11.95□□□□□ -0.5
PHF3-209ENST00000509330 HTR1DP28221 377 aa11.95□□□□□ -0.5
PHF3-209ENST00000509330 RBMS3Q6XE24 437 aaKnown RBP11.95□□□□□ -0.5
PHF3-209ENST00000509330 BBC3Q96PG8 261 aaPredicted RBP11.95□□□□□ -0.5
PHF3-209ENST00000509330 UNKLQ9H9P5 680 aaKnown RBP11.95□□□□□ -0.5
PHF3-209ENST00000509330 MPDU1O75352 247 aa11.94□□□□□ -0.5
PHF3-209ENST00000509330 AGAP20933 346 aa11.94□□□□□ -0.5
PHF3-209ENST00000509330 C2orf83Q53S99 150 aa11.94□□□□□ -0.5
PHF3-209ENST00000509330 MIR17HGQ75NE6 70 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms