RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 TGFBR1P36897 503 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 FOXA1P55317 472 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 CATR1Q13166 79 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 ZNF146Q15072 292 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 PDGFRLQ15198 375 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 CST6Q15828 149 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 RTL8BQ17RB0 113 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 SP6Q3SY56 376 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 LINC00299Q6ZSB3 139 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 RFLNAQ6ZTI6 216 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 LINC00471Q8N535 108 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 OR2A12Q8NGT7 310 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 S100ZQ8WXG8 99 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 NABP1Q96AH0 204 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 PEBP4Q96S96 227 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 RTL8AQ9BWD3 113 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 COMMD5Q9GZQ3 224 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 AICDAQ9GZX7 198 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 KRTAP23-1A1A580 65 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 FNDC10F2Z333 226 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 TSHBP01222 138 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 IGHV4-39P01824 125 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 CD14P08571 375 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 PGAM2P15259 253 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 RBMXP38159 391 aaKnown RBP5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 NCBP2P52298 156 aaKnown RBP eCLIP5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 MP68P56378 58 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 RPS11P62280 158 aaKnown RBP eCLIP5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 LCN12Q6JVE5 192 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 ZNF773Q6PK81 442 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 Q6ZSN1 163 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 LINC00173Q6ZV60 143 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 WDR86Q86TI4 376 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 OR5D14Q8NGL3 314 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 ATXN7L3BQ96GX2 97 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 HIST1H4GQ99525 98 aa5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 EIF5A2Q9GZV4 153 aaKnown RBP5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 C11orf68Q9H3H3 251 aaKnown RBP5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 POLR2AP24928 1970 aaKnown RBP5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 DICER1Q9UPY3 1922 aaKnown RBP5.8□□□□□ -1.48
PDGFRA-206ENST00000508170 RPL36A-HNRNPH2H7BZ11 118 aa5.79□□□□□ -1.48
PDGFRA-206ENST00000508170 C1QL1O75973 258 aa5.79□□□□□ -1.48
PDGFRA-206ENST00000508170 APOMO95445 188 aa5.79□□□□□ -1.48
PDGFRA-206ENST00000508170 PMS2P2O95744 297 aa5.79□□□□□ -1.48
PDGFRA-206ENST00000508170 POLR2IP36954 125 aaKnown RBP5.79□□□□□ -1.48
PDGFRA-206ENST00000508170 UBA52P62987 128 aaKnown RBP5.79□□□□□ -1.48
PDGFRA-206ENST00000508170 CRADDP78560 199 aa5.79□□□□□ -1.48
PDGFRA-206ENST00000508170 VMA21Q3ZAQ7 101 aa5.79□□□□□ -1.48
PDGFRA-206ENST00000508170 FOXI2Q6ZQN5 318 aa5.79□□□□□ -1.48
PDGFRA-206ENST00000508170 PRR15Q8IV56 129 aa5.79□□□□□ -1.48
PDGFRA-206ENST00000508170 YIPF7Q8N8F6 280 aa5.79□□□□□ -1.48
PDGFRA-206ENST00000508170 OR2M3Q8NG83 312 aa5.79□□□□□ -1.48
PDGFRA-206ENST00000508170 OR10D4PQ8NGN7 298 aa5.79□□□□□ -1.48
PDGFRA-206ENST00000508170 MED28Q9H204 178 aa5.79□□□□□ -1.48
PDGFRA-206ENST00000508170 PYGO1Q9Y3Y4 419 aa5.79□□□□□ -1.48
PDGFRA-206ENST00000508170 HEBP2Q9Y5Z4 205 aa5.79□□□□□ -1.48
PDGFRA-206ENST00000508170 ENPP4Q9Y6X5 453 aa5.79□□□□□ -1.48
PDGFRA-206ENST00000508170 SCN10AQ9Y5Y9 1956 aa5.79□□□□□ -1.48
PDGFRA-206ENST00000508170 SCN4AP35499 1836 aa5.79□□□□□ -1.48
PDGFRA-206ENST00000508170 IGHV2-26A0A0B4J1V2 119 aa5.79□□□□□ -1.48
PDGFRA-206ENST00000508170 IGHV1-69DA0A0B4J2H0 117 aa5.79□□□□□ -1.48
PDGFRA-206ENST00000508170 F5H5P2 479 aa5.79□□□□□ -1.48
PDGFRA-206ENST00000508170 LYZL6O75951 148 aa5.79□□□□□ -1.48
PDGFRA-206ENST00000508170 IGHV4-38-2P0DP08 117 aa5.79□□□□□ -1.48
PDGFRA-206ENST00000508170 GZMBP10144 247 aa5.79□□□□□ -1.48
PDGFRA-206ENST00000508170 HIST1H1DP16402 221 aaKnown RBP5.79□□□□□ -1.48
PDGFRA-206ENST00000508170 PSMB3P49720 205 aa5.79□□□□□ -1.48
PDGFRA-206ENST00000508170 TPPP2P59282 170 aa5.79□□□□□ -1.48
PDGFRA-206ENST00000508170 HOXC5Q00444 222 aa5.79□□□□□ -1.48
PDGFRA-206ENST00000508170 TEX43Q6ZNM6 134 aa5.79□□□□□ -1.48
PDGFRA-206ENST00000508170 SUMF2Q8NBJ7 301 aa5.79□□□□□ -1.48
PDGFRA-206ENST00000508170 MRPL20Q9BYC9 149 aaKnown RBP5.79□□□□□ -1.48
PDGFRA-206ENST00000508170 DEFB127Q9H1M4 99 aa5.79□□□□□ -1.48
PDGFRA-206ENST00000508170 TAS2R8Q9NYW2 309 aa5.79□□□□□ -1.48
PDGFRA-206ENST00000508170 IER3IP1Q9Y5U9 82 aa5.79□□□□□ -1.48
PDGFRA-206ENST00000508170 MCM3APO60318 1980 aa5.79□□□□□ -1.48
PDGFRA-206ENST00000508170 PDE4DIPQ5VU43 2346 aa5.79□□□□□ -1.48
PDGFRA-206ENST00000508170 CITO14578 2027 aa5.78□□□□□ -1.48
PDGFRA-206ENST00000508170 TANC1Q9C0D5 1861 aa5.78□□□□□ -1.48
PDGFRA-206ENST00000508170 FAM236AA0A1B0GUQ0 79 aa5.78□□□□□ -1.48
PDGFRA-206ENST00000508170 TEX48A0A1B0GUV7 120 aa5.78□□□□□ -1.48
PDGFRA-206ENST00000508170 FAM236BA0A1B0GV22 79 aa5.78□□□□□ -1.48
PDGFRA-206ENST00000508170 CDC42EP2O14613 210 aa5.78□□□□□ -1.48
PDGFRA-206ENST00000508170 GSTZ1O43708 216 aaPredicted RBP5.78□□□□□ -1.48
PDGFRA-206ENST00000508170 SPINK8P0C7L1 97 aa5.78□□□□□ -1.48
PDGFRA-206ENST00000508170 HKR1P10072 659 aa5.78□□□□□ -1.48
PDGFRA-206ENST00000508170 RBMY1FQ15415 496 aaKnown RBP5.78□□□□□ -1.48
PDGFRA-206ENST00000508170 SPANXN3Q5MJ09 141 aa5.78□□□□□ -1.48
PDGFRA-206ENST00000508170 NXNL2Q5VZ03 156 aa5.78□□□□□ -1.48
PDGFRA-206ENST00000508170 OR10G8Q8NGN5 311 aa5.78□□□□□ -1.48
PDGFRA-206ENST00000508170 ST6GAL2Q96JF0 529 aa5.78□□□□□ -1.48
PDGFRA-206ENST00000508170 TM2D3Q9BRN9 247 aa5.78□□□□□ -1.48
PDGFRA-206ENST00000508170 GABARAPL3Q9BY60 117 aa5.78□□□□□ -1.48
PDGFRA-206ENST00000508170 R3HDMLQ9H3Y0 253 aa5.78□□□□□ -1.48
PDGFRA-206ENST00000508170 CLCF1Q9UBD9 225 aa5.78□□□□□ -1.48
PDGFRA-206ENST00000508170 FIS1Q9Y3D6 152 aa5.78□□□□□ -1.48
PDGFRA-206ENST00000508170 PAPPA2Q9BXP8 1791 aa5.78□□□□□ -1.48
PDGFRA-206ENST00000508170 ZNF106Q9H2Y7 1883 aaKnown RBP5.78□□□□□ -1.48
PDGFRA-206ENST00000508170 TRIP11Q15643 1979 aa5.78□□□□□ -1.48
PDGFRA-206ENST00000508170 ZSWIM8A7E2V4 1837 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms