RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 GPN1Q9HCN4 374 aaPredicted RBP6.4□□□□□ -1.39
CDC42SE2-208ENST00000505065 WSB1Q9Y6I7 421 aa6.4□□□□□ -1.39
CDC42SE2-208ENST00000505065 DEDDO75618 318 aa6.39□□□□□ -1.39
CDC42SE2-208ENST00000505065 CD28P10747 220 aa6.39□□□□□ -1.39
CDC42SE2-208ENST00000505065 IZUMO4Q1ZYL8 232 aa6.39□□□□□ -1.39
CDC42SE2-208ENST00000505065 SHISA2Q6UWI4 295 aa6.39□□□□□ -1.39
CDC42SE2-208ENST00000505065 THAP8Q8NA92 274 aa6.39□□□□□ -1.39
CDC42SE2-208ENST00000505065 DHFRP00374 187 aa6.39□□□□□ -1.39
CDC42SE2-208ENST00000505065 SLC25A4P12235 298 aa6.39□□□□□ -1.39
CDC42SE2-208ENST00000505065 RRAS2P62070 204 aaPredicted RBP6.39□□□□□ -1.39
CDC42SE2-208ENST00000505065 IL34Q6ZMJ4 242 aa6.39□□□□□ -1.39
CDC42SE2-208ENST00000505065 NECAP1Q8NC96 275 aa6.39□□□□□ -1.39
CDC42SE2-208ENST00000505065 TSSC4Q9Y5U2 329 aaPredicted RBP6.39□□□□□ -1.39
CDC42SE2-208ENST00000505065 TMEM267Q0VDI3 215 aaPredicted RBP6.39□□□□□ -1.39
CDC42SE2-208ENST00000505065 TNXAQ16473 311 aa6.39□□□□□ -1.39
CDC42SE2-208ENST00000505065 HAPLN4Q86UW8 402 aa6.39□□□□□ -1.39
CDC42SE2-208ENST00000505065 TMEM116Q8NCL8 245 aa6.39□□□□□ -1.39
CDC42SE2-208ENST00000505065 OR4C12Q96R67 309 aa6.39□□□□□ -1.39
CDC42SE2-208ENST00000505065 KLK15Q9H2R5 256 aa6.39□□□□□ -1.39
CDC42SE2-208ENST00000505065 H0YIZ8 118 aa6.39□□□□□ -1.39
CDC42SE2-208ENST00000505065 SCAF4O95104 1147 aaKnown RBP6.39□□□□□ -1.39
CDC42SE2-208ENST00000505065 LGALS1P09382 135 aaKnown RBP6.39□□□□□ -1.39
CDC42SE2-208ENST00000505065 CXorf66Q5JRM2 361 aaPredicted RBP6.39□□□□□ -1.39
CDC42SE2-208ENST00000505065 REC114Q7Z4M0 266 aa6.39□□□□□ -1.39
CDC42SE2-208ENST00000505065 U3KQ87 197 aa6.39□□□□□ -1.39
CDC42SE2-208ENST00000505065 PLXNB1O43157 2135 aa6.38□□□□□ -1.39
CDC42SE2-208ENST00000505065 A8MWP6 167 aa6.38□□□□□ -1.39
CDC42SE2-208ENST00000505065 LGALS9O00182 355 aa6.38□□□□□ -1.39
CDC42SE2-208ENST00000505065 GIPP09681 153 aaPredicted RBP6.38□□□□□ -1.39
CDC42SE2-208ENST00000505065 GPX4P36969 197 aaPredicted RBP6.38□□□□□ -1.39
CDC42SE2-208ENST00000505065 HTR2BP41595 481 aa6.38□□□□□ -1.39
CDC42SE2-208ENST00000505065 EXOSC2Q13868 293 aaKnown RBP6.38□□□□□ -1.39
CDC42SE2-208ENST00000505065 C4orf46Q504U0 113 aa6.38□□□□□ -1.39
CDC42SE2-208ENST00000505065 C11orf87Q6NUJ2 197 aa6.38□□□□□ -1.39
CDC42SE2-208ENST00000505065 LFNGQ8NES3 379 aa6.38□□□□□ -1.39
CDC42SE2-208ENST00000505065 OR5AU1Q8NGC0 362 aa6.38□□□□□ -1.39
CDC42SE2-208ENST00000505065 WDR89Q96FK6 387 aaPredicted RBP6.38□□□□□ -1.39
CDC42SE2-208ENST00000505065 TLN2Q9Y4G6 2542 aa6.38□□□□□ -1.39
CDC42SE2-208ENST00000505065 TRBV7-1A0A0A6YYK4 115 aa6.38□□□□□ -1.39
CDC42SE2-208ENST00000505065 C8orf88P0DMB2 117 aa6.38□□□□□ -1.39
CDC42SE2-208ENST00000505065 CXCL3P19876 107 aa6.38□□□□□ -1.39
CDC42SE2-208ENST00000505065 TRIM16LQ309B1 348 aa6.38□□□□□ -1.39
CDC42SE2-208ENST00000505065 OR4A16Q8NH70 328 aa6.38□□□□□ -1.39
CDC42SE2-208ENST00000505065 GGACTQ9BVM4 153 aa6.38□□□□□ -1.39
CDC42SE2-208ENST00000505065 VWFP04275 2813 aa6.38□□□□□ -1.39
CDC42SE2-208ENST00000505065 IGKV1D-37A0A075B6S9 117 aa6.38□□□□□ -1.39
CDC42SE2-208ENST00000505065 CORTO00230 105 aa6.38□□□□□ -1.39
CDC42SE2-208ENST00000505065 RAB40CQ96S21 281 aa6.38□□□□□ -1.39
CDC42SE2-208ENST00000505065 GNB4Q9HAV0 340 aa6.38□□□□□ -1.39
CDC42SE2-208ENST00000505065 PARP11Q9NR21 331 aa6.38□□□□□ -1.39
CDC42SE2-208ENST00000505065 MED6O75586 246 aa6.37□□□□□ -1.39
CDC42SE2-208ENST00000505065 SLC35B1P78383 322 aa6.37□□□□□ -1.39
CDC42SE2-208ENST00000505065 FNDC4Q9H6D8 234 aaPredicted RBP6.37□□□□□ -1.39
CDC42SE2-208ENST00000505065 LYRM2Q9NU23 88 aaPredicted RBP6.37□□□□□ -1.39
CDC42SE2-208ENST00000505065 LSM4Q9Y4Z0 139 aaKnown RBP6.37□□□□□ -1.39
CDC42SE2-208ENST00000505065 HMX3A6NHT5 357 aa6.37□□□□□ -1.39
CDC42SE2-208ENST00000505065 SYNGR2O43760 224 aa6.37□□□□□ -1.39
CDC42SE2-208ENST00000505065 RPLP1P05386 114 aaKnown RBP6.37□□□□□ -1.39
CDC42SE2-208ENST00000505065 LINC00482Q8N8I6 264 aa6.37□□□□□ -1.39
CDC42SE2-208ENST00000505065 OR4X1Q8NH49 305 aa6.37□□□□□ -1.39
CDC42SE2-208ENST00000505065 CIB3Q96Q77 187 aaPredicted RBP6.37□□□□□ -1.39
CDC42SE2-208ENST00000505065 NSG2Q9Y328 171 aa6.37□□□□□ -1.39
CDC42SE2-208ENST00000505065 SNAPC5O75971 98 aa6.37□□□□□ -1.39
CDC42SE2-208ENST00000505065 CRYBA1P05813 215 aa6.37□□□□□ -1.39
CDC42SE2-208ENST00000505065 KLF5Q13887 457 aaPredicted RBP6.37□□□□□ -1.39
CDC42SE2-208ENST00000505065 TMEM65Q6PI78 240 aa6.37□□□□□ -1.39
CDC42SE2-208ENST00000505065 RRNAD1Q96FB5 475 aaKnown RBP6.37□□□□□ -1.39
CDC42SE2-208ENST00000505065 COMMD5Q9GZQ3 224 aa6.37□□□□□ -1.39
CDC42SE2-208ENST00000505065 NOTCH2Q04721 2471 aa6.37□□□□□ -1.39
CDC42SE2-208ENST00000505065 NXPH3O95157 252 aa6.36□□□□□ -1.39
CDC42SE2-208ENST00000505065 NDUFB8O95169 186 aa6.36□□□□□ -1.39
CDC42SE2-208ENST00000505065 VAMP1P23763 118 aa6.36□□□□□ -1.39
CDC42SE2-208ENST00000505065 UNQ5815/PRO19632Q6UWF5 114 aa6.36□□□□□ -1.39
CDC42SE2-208ENST00000505065 SSX9Q7RTT3 188 aa6.36□□□□□ -1.39
CDC42SE2-208ENST00000505065 DTD1Q8TEA8 209 aa6.36□□□□□ -1.39
CDC42SE2-208ENST00000505065 CACNG8Q8WXS5 425 aa6.36□□□□□ -1.39
CDC42SE2-208ENST00000505065 RAX2Q96IS3 184 aa6.36□□□□□ -1.39
CDC42SE2-208ENST00000505065 FAM103A1Q9BTL3 118 aaKnown RBP6.36□□□□□ -1.39
CDC42SE2-208ENST00000505065 DNAH7Q8WXX0 4024 aa6.36□□□□□ -1.39
CDC42SE2-208ENST00000505065 SONP18583 2426 aaKnown RBP6.36□□□□□ -1.39
CDC42SE2-208ENST00000505065 CENPVQ7Z7K6 275 aaPredicted RBP6.36□□□□□ -1.39
CDC42SE2-208ENST00000505065 MRPL41Q8IXM3 137 aaKnown RBP6.36□□□□□ -1.39
CDC42SE2-208ENST00000505065 TCTE3Q8IZS6 198 aa6.36□□□□□ -1.39
CDC42SE2-208ENST00000505065 CITED2Q99967 270 aaPredicted RBP6.36□□□□□ -1.39
CDC42SE2-208ENST00000505065 U3KQE9 123 aa6.36□□□□□ -1.39
CDC42SE2-208ENST00000505065 LINC00854A0A1B0GVQ3 168 aa6.36□□□□□ -1.39
CDC42SE2-208ENST00000505065 BMPR1BO00238 502 aa6.36□□□□□ -1.39
CDC42SE2-208ENST00000505065 OPN1MWP04001 364 aa6.36□□□□□ -1.39
CDC42SE2-208ENST00000505065 OPN1MW2P0DN77 364 aa6.36□□□□□ -1.39
CDC42SE2-208ENST00000505065 OPN1MW3P0DN78 364 aa6.36□□□□□ -1.39
CDC42SE2-208ENST00000505065 MYCNOSP40205 109 aa6.36□□□□□ -1.39
CDC42SE2-208ENST00000505065 P2RY1P47900 373 aa6.36□□□□□ -1.39
CDC42SE2-208ENST00000505065 GNB1P62873 340 aa6.36□□□□□ -1.39
CDC42SE2-208ENST00000505065 CYCSP99999 105 aaKnown RBP6.36□□□□□ -1.39
CDC42SE2-208ENST00000505065 PLEKHA3Q9HB20 300 aa6.36□□□□□ -1.39
CDC42SE2-208ENST00000505065 MFSD2BA6NFX1 497 aa6.36□□□□□ -1.39
CDC42SE2-208ENST00000505065 C18orf65Q6ZTR6 163 aa6.36□□□□□ -1.39
CDC42SE2-208ENST00000505065 GPHB5Q86YW7 130 aa6.36□□□□□ -1.39
CDC42SE2-208ENST00000505065 ST6GAL2Q96JF0 529 aa6.36□□□□□ -1.39
CDC42SE2-208ENST00000505065 ZFAND3Q9H8U3 227 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms