RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 OR1L8Q8NGR8 309 aa3.83□□□□□ -1.8
LMNB1-208ENST00000504788 GRPEL2Q8TAA5 225 aa3.83□□□□□ -1.8
LMNB1-208ENST00000504788 CHAC2Q8WUX2 184 aa3.83□□□□□ -1.8
LMNB1-208ENST00000504788 FYTTD1Q96QD9 318 aaKnown RBP3.83□□□□□ -1.8
LMNB1-208ENST00000504788 P2RX4Q99571 388 aa3.83□□□□□ -1.8
LMNB1-208ENST00000504788 SPIN2AQ99865 258 aa3.83□□□□□ -1.8
LMNB1-208ENST00000504788 SPIN2BQ9BPZ2 258 aa3.83□□□□□ -1.8
LMNB1-208ENST00000504788 ZNF747Q9BV97 191 aa3.83□□□□□ -1.8
LMNB1-208ENST00000504788 PARP11Q9NR21 331 aa3.83□□□□□ -1.8
LMNB1-208ENST00000504788 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.83□□□□□ -1.8
LMNB1-208ENST00000504788 OR51B2Q9Y5P1 312 aa3.83□□□□□ -1.8
LMNB1-208ENST00000504788 KRTAP4-8A0A0G2JLE6 195 aa3.82□□□□□ -1.8
LMNB1-208ENST00000504788 A0A1W2PN81 502 aa3.82□□□□□ -1.8
LMNB1-208ENST00000504788 PSMB11A5LHX3 300 aa3.82□□□□□ -1.8
LMNB1-208ENST00000504788 FAM90A26D6RGX4 464 aa3.82□□□□□ -1.8
LMNB1-208ENST00000504788 H3BUA1 57 aa3.82□□□□□ -1.8
LMNB1-208ENST00000504788 I3L2K1 104 aa3.82□□□□□ -1.8
LMNB1-208ENST00000504788 K7EIM0 57 aa3.82□□□□□ -1.8
LMNB1-208ENST00000504788 CREBL2O60519 120 aaPredicted RBP3.82□□□□□ -1.8
LMNB1-208ENST00000504788 MBPP02686 304 aaPredicted RBP3.82□□□□□ -1.8
LMNB1-208ENST00000504788 PRH1P02810 166 aa3.82□□□□□ -1.8
LMNB1-208ENST00000504788 REG1AP05451 166 aa3.82□□□□□ -1.8
LMNB1-208ENST00000504788 CRYBA1P05813 215 aa3.82□□□□□ -1.8
LMNB1-208ENST00000504788 ELANEP08246 267 aa3.82□□□□□ -1.8
LMNB1-208ENST00000504788 TRAPPC2P0DI81 140 aa3.82□□□□□ -1.8
LMNB1-208ENST00000504788 TRAPPC2BP0DI82 140 aa3.82□□□□□ -1.8
LMNB1-208ENST00000504788 CHRNA7P36544 502 aa3.82□□□□□ -1.8
LMNB1-208ENST00000504788 RAB9AP51151 201 aa3.82□□□□□ -1.8
LMNB1-208ENST00000504788 SPCS3P61009 180 aa3.82□□□□□ -1.8
LMNB1-208ENST00000504788 ERVK-16P61578 105 aa3.82□□□□□ -1.8
LMNB1-208ENST00000504788 FOXE3Q13461 319 aa3.82□□□□□ -1.8
LMNB1-208ENST00000504788 FHL3Q13643 280 aa3.82□□□□□ -1.8
LMNB1-208ENST00000504788 PLGLAQ15195 96 aa3.82□□□□□ -1.8
LMNB1-208ENST00000504788 SPINK9Q5DT21 86 aa3.82□□□□□ -1.8
LMNB1-208ENST00000504788 C9orf152Q5JTZ5 239 aa3.82□□□□□ -1.8
LMNB1-208ENST00000504788 THOC7Q6I9Y2 204 aaKnown RBP3.82□□□□□ -1.8
LMNB1-208ENST00000504788 UNQ5815/PRO19632Q6UWF5 114 aa3.82□□□□□ -1.8
LMNB1-208ENST00000504788 ETV3LQ6ZN32 361 aa3.82□□□□□ -1.8
LMNB1-208ENST00000504788 COQ8AQ8NI60 647 aa3.82□□□□□ -1.8
LMNB1-208ENST00000504788 RRNAD1Q96FB5 475 aaKnown RBP3.82□□□□□ -1.8
LMNB1-208ENST00000504788 CCDC140Q96MF4 163 aa3.82□□□□□ -1.8
LMNB1-208ENST00000504788 PHB2Q99623 299 aa3.82□□□□□ -1.8
LMNB1-208ENST00000504788 CITED2Q99967 270 aaPredicted RBP3.82□□□□□ -1.8
LMNB1-208ENST00000504788 COMMD5Q9GZQ3 224 aa3.82□□□□□ -1.8
LMNB1-208ENST00000504788 FNDC4Q9H6D8 234 aaPredicted RBP3.82□□□□□ -1.8
LMNB1-208ENST00000504788 FKBP11Q9NYL4 201 aa3.82□□□□□ -1.8
LMNB1-208ENST00000504788 MRPL36Q9P0J6 103 aaKnown RBP3.82□□□□□ -1.8
LMNB1-208ENST00000504788 F11RQ9Y624 299 aaKnown RBP3.82□□□□□ -1.8
LMNB1-208ENST00000504788 A0A1B0GVG6 124 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 MFSD2BA6NFX1 497 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 C15orf62A8K5M9 175 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 SNAPC5O75971 98 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 ATG12O94817 140 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 NXPH3O95157 252 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 SIX6O95475 246 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 DHFRP00374 187 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 OR13C7P0DN81 318 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 CDX1P47902 265 aaPredicted RBP3.81□□□□□ -1.8
LMNB1-208ENST00000504788 GNB1P62873 340 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 RUNX1Q01196 453 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 DEFA5Q01523 94 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 FCN2Q15485 313 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 ECSCRQ19T08 205 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 IAH1Q2TAA2 248 aaPredicted RBP3.81□□□□□ -1.8
LMNB1-208ENST00000504788 Q5BKY6 102 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 TEX38Q6PEX7 206 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 HSD17B13Q7Z5P4 300 aaPredicted RBP3.81□□□□□ -1.8
LMNB1-208ENST00000504788 HAPLN4Q86UW8 402 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 OR5T1Q8NG75 326 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 OR1P1Q8NH06 330 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 OR4A16Q8NH70 328 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 UBE2E2Q96LR5 201 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 RNF126Q9BV68 326 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 KRTAP9-9Q9BYP9 154 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 KRTAP9-4Q9BYQ2 154 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 RBKSQ9H477 322 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 GNB4Q9HAV0 340 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 MGAT4CQ9UBM8 478 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 MGAM2Q2M2H8 2515 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 IGKV1OR2-108A0A075B7D4 117 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 TRAV14DV4A0A0A6YYC5 116 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 PIGBOS1A0A0B4J2F0 54 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 K7EPK0 472 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 SYNGR2O43760 224 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 NDUFB8O95169 186 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 CNIH1O95406 144 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 TRBV12-3P01733 135 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 LYL1P12980 280 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 FCGR2BP31994 310 aaPredicted RBP3.81□□□□□ -1.8
LMNB1-208ENST00000504788 ADMP35318 185 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 RRAS2P62070 204 aaPredicted RBP3.81□□□□□ -1.8
LMNB1-208ENST00000504788 POLR2GP62487 172 aaKnown RBP eCLIP3.81□□□□□ -1.8
LMNB1-208ENST00000504788 RPL23AP62750 156 aaKnown RBP3.81□□□□□ -1.8
LMNB1-208ENST00000504788 ARL16Q0P5N6 197 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 TMEM267Q0VDI3 215 aaPredicted RBP3.81□□□□□ -1.8
LMNB1-208ENST00000504788 RAB32Q13637 225 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 MLANAQ16655 118 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 C2orf83Q53S99 150 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 ZNF343Q6P1L6 599 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 TMEM14EPQ6UXP3 125 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms