RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 CLEC3BP05452 202 aa9.79□□□□□ -0.84
HSPG2-213ENST00000498495 ARL3P36405 182 aa9.79□□□□□ -0.84
HSPG2-213ENST00000498495 INPP1P49441 399 aa9.79□□□□□ -0.84
HSPG2-213ENST00000498495 ERHP84090 104 aaKnown RBP9.79□□□□□ -0.84
HSPG2-213ENST00000498495 IZUMO4Q1ZYL8 232 aa9.79□□□□□ -0.84
HSPG2-213ENST00000498495 ZNF57Q68EA5 555 aaPredicted RBP9.79□□□□□ -0.84
HSPG2-213ENST00000498495 TRIM63Q969Q1 353 aa9.79□□□□□ -0.84
HSPG2-213ENST00000498495 PRR25Q96S07 402 aa9.79□□□□□ -0.84
HSPG2-213ENST00000498495 PDCD10Q9BUL8 212 aa9.79□□□□□ -0.84
HSPG2-213ENST00000498495 PEMTQ9UBM1 199 aa9.79□□□□□ -0.84
HSPG2-213ENST00000498495 F11RQ9Y624 299 aaKnown RBP9.79□□□□□ -0.84
HSPG2-213ENST00000498495 A0A0B4J293 547 aa9.78□□□□□ -0.84
HSPG2-213ENST00000498495 MFSD2BA6NFX1 497 aa9.78□□□□□ -0.84
HSPG2-213ENST00000498495 IFNA17P01571 189 aa9.78□□□□□ -0.84
HSPG2-213ENST00000498495 AKR1C4P17516 323 aa9.78□□□□□ -0.84
HSPG2-213ENST00000498495 PRCDQ00LT1 54 aa9.78□□□□□ -0.84
HSPG2-213ENST00000498495 DCTN2Q13561 401 aaKnown RBP9.78□□□□□ -0.84
HSPG2-213ENST00000498495 VN1R17PQ8TDU5 208 aa9.78□□□□□ -0.84
HSPG2-213ENST00000498495 DEDD2Q8WXF8 326 aa9.78□□□□□ -0.84
HSPG2-213ENST00000498495 CCDC140Q96MF4 163 aa9.78□□□□□ -0.84
HSPG2-213ENST00000498495 SRRQ9GZT4 340 aa9.78□□□□□ -0.84
HSPG2-213ENST00000498495 PLEKHA3Q9HB20 300 aa9.78□□□□□ -0.84
HSPG2-213ENST00000498495 DMRT1Q9Y5R6 373 aa9.78□□□□□ -0.84
HSPG2-213ENST00000498495 HLA-AP01891 365 aaKnown RBP9.77□□□□□ -0.85
HSPG2-213ENST00000498495 CSN3P07498 182 aa9.77□□□□□ -0.85
HSPG2-213ENST00000498495 P0C879 139 aa9.77□□□□□ -0.85
HSPG2-213ENST00000498495 SPNP16150 400 aa9.77□□□□□ -0.85
HSPG2-213ENST00000498495 FAM106AQ4KMX7 169 aa9.77□□□□□ -0.85
HSPG2-213ENST00000498495 TMEM268Q5VZI3 342 aa9.77□□□□□ -0.85
HSPG2-213ENST00000498495 GPHB5Q86YW7 130 aa9.77□□□□□ -0.85
HSPG2-213ENST00000498495 FAM219AQ8IW50 185 aa9.77□□□□□ -0.85
HSPG2-213ENST00000498495 SELENOHQ8IZQ5 122 aaKnown RBP9.77□□□□□ -0.85
HSPG2-213ENST00000498495 OR2C3Q8N628 320 aa9.77□□□□□ -0.85
HSPG2-213ENST00000498495 OR1P1Q8NH06 330 aa9.77□□□□□ -0.85
HSPG2-213ENST00000498495 RBPMSQ93062 196 aaKnown RBP9.77□□□□□ -0.85
HSPG2-213ENST00000498495 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.77□□□□□ -0.85
HSPG2-213ENST00000498495 IGHV3-21A0A0B4J1V1 117 aa9.76□□□□□ -0.85
HSPG2-213ENST00000498495 ZNF320A2RRD8 509 aa9.76□□□□□ -0.85
HSPG2-213ENST00000498495 ST8SIA3O43173 380 aa9.76□□□□□ -0.85
HSPG2-213ENST00000498495 IGLV1-51P01701 117 aa9.76□□□□□ -0.85
HSPG2-213ENST00000498495 ANXA3P12429 323 aa9.76□□□□□ -0.85
HSPG2-213ENST00000498495 GP9P14770 177 aa9.76□□□□□ -0.85
HSPG2-213ENST00000498495 GPR183P32249 361 aa9.76□□□□□ -0.85
HSPG2-213ENST00000498495 SNCAP37840 140 aa9.76□□□□□ -0.85
HSPG2-213ENST00000498495 MFAP2P55001 183 aa9.76□□□□□ -0.85
HSPG2-213ENST00000498495 BAK1Q16611 211 aa9.76□□□□□ -0.85
HSPG2-213ENST00000498495 SPINK9Q5DT21 86 aa9.76□□□□□ -0.85
HSPG2-213ENST00000498495 TRIQKQ629K1 86 aa9.76□□□□□ -0.85
HSPG2-213ENST00000498495 PLET1Q6UQ28 207 aa9.76□□□□□ -0.85
HSPG2-213ENST00000498495 IL34Q6ZMJ4 242 aa9.76□□□□□ -0.85
HSPG2-213ENST00000498495 HAPLN4Q86UW8 402 aa9.76□□□□□ -0.85
HSPG2-213ENST00000498495 SLC35G3Q8N808 338 aa9.76□□□□□ -0.85
HSPG2-213ENST00000498495 LHFPL5Q8TAF8 219 aa9.76□□□□□ -0.85
HSPG2-213ENST00000498495 ZNF502Q8TBZ5 544 aa9.76□□□□□ -0.85
HSPG2-213ENST00000498495 SCARB1Q8WTV0 552 aa9.76□□□□□ -0.85
HSPG2-213ENST00000498495 TMEM230Q96A57 120 aa9.76□□□□□ -0.85
HSPG2-213ENST00000498495 GALNT14Q96FL9 552 aa9.76□□□□□ -0.85
HSPG2-213ENST00000498495 SLC25A21Q9BQT8 299 aaPredicted RBP9.76□□□□□ -0.85
HSPG2-213ENST00000498495 ENY2Q9NPA8 101 aa9.76□□□□□ -0.85
HSPG2-213ENST00000498495 ZC4H2Q9NQZ6 224 aa9.76□□□□□ -0.85
HSPG2-213ENST00000498495 SIGLEC8Q9NYZ4 499 aa9.76□□□□□ -0.85
HSPG2-213ENST00000498495 TMEM56-RWDD3S4R434 201 aa9.76□□□□□ -0.85
HSPG2-213ENST00000498495 A0A0G2JRQ6 117 aa9.75□□□□□ -0.85
HSPG2-213ENST00000498495 LGALS9O00182 355 aa9.75□□□□□ -0.85
HSPG2-213ENST00000498495 SUB1P53999 127 aaKnown RBP eCLIP9.75□□□□□ -0.85
HSPG2-213ENST00000498495 TMEM187Q14656 261 aa9.75□□□□□ -0.85
HSPG2-213ENST00000498495 Q6ZRM9 215 aa9.75□□□□□ -0.85
HSPG2-213ENST00000498495 TMED4Q7Z7H5 227 aa9.75□□□□□ -0.85
HSPG2-213ENST00000498495 IL22RA2Q969J5 263 aa9.75□□□□□ -0.85
HSPG2-213ENST00000498495 GPR146Q96CH1 333 aa9.75□□□□□ -0.85
HSPG2-213ENST00000498495 MISP3Q96FF7 219 aa9.75□□□□□ -0.85
HSPG2-213ENST00000498495 C21orf62Q9NYP8 219 aa9.75□□□□□ -0.85
HSPG2-213ENST00000498495 LSM4Q9Y4Z0 139 aaKnown RBP9.75□□□□□ -0.85
HSPG2-213ENST00000498495 NAP1L6A6NFF2 107 aa9.74□□□□□ -0.85
HSPG2-213ENST00000498495 INS-IGF2F8WCM5 200 aa9.74□□□□□ -0.85
HSPG2-213ENST00000498495 TGOLN2O43493 480 aa9.74□□□□□ -0.85
HSPG2-213ENST00000498495 HOXA1P49639 335 aaPredicted RBP9.74□□□□□ -0.85
HSPG2-213ENST00000498495 Q56UQ5 140 aa9.74□□□□□ -0.85
HSPG2-213ENST00000498495 TMEM128Q5BJH2 165 aa9.74□□□□□ -0.85
HSPG2-213ENST00000498495 LGI3Q8N145 548 aa9.74□□□□□ -0.85
HSPG2-213ENST00000498495 UBAC2Q8NBM4 344 aa9.74□□□□□ -0.85
HSPG2-213ENST00000498495 ZNF114Q8NC26 417 aa9.74□□□□□ -0.85
HSPG2-213ENST00000498495 OR52E5Q8NH55 327 aa9.74□□□□□ -0.85
HSPG2-213ENST00000498495 PRR13Q9NZ81 148 aa9.74□□□□□ -0.85
HSPG2-213ENST00000498495 SMAD5-AS1Q9Y6J3 95 aa9.74□□□□□ -0.85
HSPG2-213ENST00000498495 PIGBOS1A0A0B4J2F0 54 aa9.73□□□□□ -0.85
HSPG2-213ENST00000498495 LINC00854A0A1B0GVQ3 168 aa9.73□□□□□ -0.85
HSPG2-213ENST00000498495 OR2T8A6NH00 312 aa9.73□□□□□ -0.85
HSPG2-213ENST00000498495 CENPXA8MT69 81 aa9.73□□□□□ -0.85
HSPG2-213ENST00000498495 K7EIM0 57 aa9.73□□□□□ -0.85
HSPG2-213ENST00000498495 SPCS3P61009 180 aa9.73□□□□□ -0.85
HSPG2-213ENST00000498495 SUPT4H1P63272 117 aaKnown RBP9.73□□□□□ -0.85
HSPG2-213ENST00000498495 SRPXP78539 464 aa9.73□□□□□ -0.85
HSPG2-213ENST00000498495 CD69Q07108 199 aa9.73□□□□□ -0.85
HSPG2-213ENST00000498495 DYNLRB2Q8TF09 96 aa9.73□□□□□ -0.85
HSPG2-213ENST00000498495 PINX1Q96BK5 328 aaKnown RBP9.73□□□□□ -0.85
HSPG2-213ENST00000498495 BSCL2Q96G97 398 aaPredicted RBP9.73□□□□□ -0.85
HSPG2-213ENST00000498495 ATP6V0BQ99437 205 aa9.73□□□□□ -0.85
HSPG2-213ENST00000498495 PALMDQ9NP74 551 aa9.73□□□□□ -0.85
HSPG2-213ENST00000498495 GAR1Q9NY12 217 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms