RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 MOB4Q9Y3A3 225 aa6.76□□□□□ -1.33
SF3A1-210ENST00000498259 A0A096LNT2 108 aa6.75□□□□□ -1.33
SF3A1-210ENST00000498259 PMS2P5A8MQ11 134 aa6.75□□□□□ -1.33
SF3A1-210ENST00000498259 TSPAN15O95858 294 aa6.75□□□□□ -1.33
SF3A1-210ENST00000498259 MT-CO2P00403 227 aa6.75□□□□□ -1.33
SF3A1-210ENST00000498259 NMBP08949 121 aa6.75□□□□□ -1.33
SF3A1-210ENST00000498259 RNASE2P10153 161 aaKnown RBP6.75□□□□□ -1.33
SF3A1-210ENST00000498259 HIST1H1BP16401 226 aaKnown RBP6.75□□□□□ -1.33
SF3A1-210ENST00000498259 HNF1AP20823 631 aa6.75□□□□□ -1.33
SF3A1-210ENST00000498259 S100A7P31151 101 aa6.75□□□□□ -1.33
SF3A1-210ENST00000498259 OPRK1P41145 380 aa6.75□□□□□ -1.33
SF3A1-210ENST00000498259 ACOT6Q3I5F7 207 aaPredicted RBP6.75□□□□□ -1.33
SF3A1-210ENST00000498259 LDLRAD2Q5SZI1 272 aa6.75□□□□□ -1.33
SF3A1-210ENST00000498259 UQCC3Q6UW78 93 aa6.75□□□□□ -1.33
SF3A1-210ENST00000498259 BTNL8Q6UX41 500 aa6.75□□□□□ -1.33
SF3A1-210ENST00000498259 IL34Q6ZMJ4 242 aa6.75□□□□□ -1.33
SF3A1-210ENST00000498259 Q6ZRG5 221 aa6.75□□□□□ -1.33
SF3A1-210ENST00000498259 TMEM144Q7Z5S9 345 aa6.75□□□□□ -1.33
SF3A1-210ENST00000498259 RITA1Q96K30 269 aa6.75□□□□□ -1.33
SF3A1-210ENST00000498259 RBM14Q96PK6 669 aaKnown RBP6.75□□□□□ -1.33
SF3A1-210ENST00000498259 SSX3Q99909 188 aa6.75□□□□□ -1.33
SF3A1-210ENST00000498259 PBDC1Q9BVG4 233 aa6.75□□□□□ -1.33
SF3A1-210ENST00000498259 WDR83OSQ9Y284 106 aa6.75□□□□□ -1.33
SF3A1-210ENST00000498259 A0A0U1RQK1 487 aa6.74□□□□□ -1.33
SF3A1-210ENST00000498259 RAB19A4D1S5 217 aa6.74□□□□□ -1.33
SF3A1-210ENST00000498259 NPIPB5A8MRT5 1133 aa6.74□□□□□ -1.33
SF3A1-210ENST00000498259 H2AFB1P0C5Y9 115 aa6.74□□□□□ -1.33
SF3A1-210ENST00000498259 TAGLN2P37802 199 aaKnown RBP6.74□□□□□ -1.33
SF3A1-210ENST00000498259 SELENOTP62341 195 aa6.74□□□□□ -1.33
SF3A1-210ENST00000498259 WT1-ASQ06250 92 aa6.74□□□□□ -1.33
SF3A1-210ENST00000498259 CD69Q07108 199 aa6.74□□□□□ -1.33
SF3A1-210ENST00000498259 ZNF616Q08AN1 781 aa6.74□□□□□ -1.33
SF3A1-210ENST00000498259 ARL16Q0P5N6 197 aa6.74□□□□□ -1.33
SF3A1-210ENST00000498259 PJVKQ0ZLH3 352 aa6.74□□□□□ -1.33
SF3A1-210ENST00000498259 TUSC1Q2TAM9 212 aa6.74□□□□□ -1.33
SF3A1-210ENST00000498259 TMEM41BQ5BJD5 291 aa6.74□□□□□ -1.33
SF3A1-210ENST00000498259 BRD3OSQ6XYD6 125 aa6.74□□□□□ -1.33
SF3A1-210ENST00000498259 TMEM182Q6ZP80 229 aaPredicted RBP6.74□□□□□ -1.33
SF3A1-210ENST00000498259 C9orf139Q6ZV77 190 aa6.74□□□□□ -1.33
SF3A1-210ENST00000498259 OR10W1Q8NGF6 305 aa6.74□□□□□ -1.33
SF3A1-210ENST00000498259 SSMEM1Q8WWF3 244 aa6.74□□□□□ -1.33
SF3A1-210ENST00000498259 MARC2Q969Z3 335 aa6.74□□□□□ -1.33
SF3A1-210ENST00000498259 RBMXL1Q96E39 390 aaKnown RBP6.74□□□□□ -1.33
SF3A1-210ENST00000498259 AJUBAQ96IF1 538 aa6.74□□□□□ -1.33
SF3A1-210ENST00000498259 SLC25A33Q9BSK2 321 aa6.74□□□□□ -1.33
SF3A1-210ENST00000498259 NPCDR1Q9BY65 106 aa6.74□□□□□ -1.33
SF3A1-210ENST00000498259 ACTR3CQ9C0K3 210 aaPredicted RBP6.74□□□□□ -1.33
SF3A1-210ENST00000498259 SMDT1Q9H4I9 107 aa6.74□□□□□ -1.33
SF3A1-210ENST00000498259 GAR1Q9NY12 217 aaKnown RBP6.74□□□□□ -1.33
SF3A1-210ENST00000498259 RNF24Q9Y225 148 aa6.74□□□□□ -1.33
SF3A1-210ENST00000498259 F11RQ9Y624 299 aaKnown RBP6.74□□□□□ -1.33
SF3A1-210ENST00000498259 USP9YO00507 2555 aaPredicted RBP6.74□□□□□ -1.33
SF3A1-210ENST00000498259 TRAV30A0A087WSZ9 112 aa6.73□□□□□ -1.33
SF3A1-210ENST00000498259 A0A1W2PPV4 95 aa6.73□□□□□ -1.33
SF3A1-210ENST00000498259 IGLC7A0M8Q6 106 aa6.73□□□□□ -1.33
SF3A1-210ENST00000498259 IFNA1P01562 189 aa6.73□□□□□ -1.33
SF3A1-210ENST00000498259 CRYGCP07315 174 aa6.73□□□□□ -1.33
SF3A1-210ENST00000498259 FAM157CP0CG43 387 aa6.73□□□□□ -1.33
SF3A1-210ENST00000498259 IGHV4-38-2P0DP08 117 aa6.73□□□□□ -1.33
SF3A1-210ENST00000498259 CD24P25063 80 aa6.73□□□□□ -1.33
SF3A1-210ENST00000498259 CNTFRP26992 372 aa6.73□□□□□ -1.33
SF3A1-210ENST00000498259 PPT1P50897 306 aa6.73□□□□□ -1.33
SF3A1-210ENST00000498259 CX3CL1P78423 397 aa6.73□□□□□ -1.33
SF3A1-210ENST00000498259 FAM74A1Q5RGS3 127 aa6.73□□□□□ -1.33
SF3A1-210ENST00000498259 RUSC1-AS1Q66K80 236 aa6.73□□□□□ -1.33
SF3A1-210ENST00000498259 TREML4Q6UXN2 200 aa6.73□□□□□ -1.33
SF3A1-210ENST00000498259 RBMS3Q6XE24 437 aaKnown RBP6.73□□□□□ -1.33
SF3A1-210ENST00000498259 SLC16A13Q7RTY0 426 aa6.73□□□□□ -1.33
SF3A1-210ENST00000498259 HAPLN4Q86UW8 402 aa6.73□□□□□ -1.33
SF3A1-210ENST00000498259 COMMD7Q86VX2 200 aa6.73□□□□□ -1.33
SF3A1-210ENST00000498259 DYNAPQ8N1N2 210 aa6.73□□□□□ -1.33
SF3A1-210ENST00000498259 TTC9CQ8N5M4 171 aa6.73□□□□□ -1.33
SF3A1-210ENST00000498259 EIF4E3Q8N5X7 224 aaKnown RBP6.73□□□□□ -1.33
SF3A1-210ENST00000498259 Q8N9W7 124 aa6.73□□□□□ -1.33
SF3A1-210ENST00000498259 SGMS2Q8NHU3 365 aa6.73□□□□□ -1.33
SF3A1-210ENST00000498259 FAM213BQ8TBF2 198 aa6.73□□□□□ -1.33
SF3A1-210ENST00000498259 BSCL2Q96G97 398 aaPredicted RBP6.73□□□□□ -1.33
SF3A1-210ENST00000498259 RNF2Q99496 336 aa6.73□□□□□ -1.33
SF3A1-210ENST00000498259 P2RX4Q99571 388 aa6.73□□□□□ -1.33
SF3A1-210ENST00000498259 TPSG1Q9NRR2 321 aa6.73□□□□□ -1.33
SF3A1-210ENST00000498259 SLC39A9Q9NUM3 307 aa6.73□□□□□ -1.33
SF3A1-210ENST00000498259 AKAP6Q13023 2319 aa6.72□□□□□ -1.33
SF3A1-210ENST00000498259 IGHV3OR16-10A0A075B7F0 116 aa6.72□□□□□ -1.33
SF3A1-210ENST00000498259 TRAV1-1A0A0B4J248 108 aa6.72□□□□□ -1.33
SF3A1-210ENST00000498259 TEX22C9J3V5 150 aa6.72□□□□□ -1.33
SF3A1-210ENST00000498259 PRSS46E5RG02 174 aa6.72□□□□□ -1.33
SF3A1-210ENST00000498259 H3BUX3 64 aa6.72□□□□□ -1.33
SF3A1-210ENST00000498259 FCN1O00602 326 aa6.72□□□□□ -1.33
SF3A1-210ENST00000498259 ATP6V1G1O75348 118 aa6.72□□□□□ -1.33
SF3A1-210ENST00000498259 CTRB1P17538 263 aa6.72□□□□□ -1.33
SF3A1-210ENST00000498259 M6PRP20645 277 aa6.72□□□□□ -1.33
SF3A1-210ENST00000498259 RPL29P47914 159 aaKnown RBP6.72□□□□□ -1.33
SF3A1-210ENST00000498259 NPBWR1P48145 328 aa6.72□□□□□ -1.33
SF3A1-210ENST00000498259 PEA15Q15121 130 aa6.72□□□□□ -1.33
SF3A1-210ENST00000498259 AKIRIN2Q53H80 203 aa6.72□□□□□ -1.33
SF3A1-210ENST00000498259 FFAR4Q5NUL3 377 aa6.72□□□□□ -1.33
SF3A1-210ENST00000498259 PVRIGQ6DKI7 326 aa6.72□□□□□ -1.33
SF3A1-210ENST00000498259 CTRB2Q6GPI1 263 aa6.72□□□□□ -1.33
SF3A1-210ENST00000498259 C5orf56Q8N8D9 126 aa6.72□□□□□ -1.33
SF3A1-210ENST00000498259 OR10G4Q8NGN3 311 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms