RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 ULBP3Q9BZM4 244 aa2.2□□□□□ -2.06
CALD1-224ENST00000498254 OR2H1Q9GZK4 316 aa2.2□□□□□ -2.06
CALD1-224ENST00000498254 TMEM222Q9H0R3 208 aa2.2□□□□□ -2.06
CALD1-224ENST00000498254 GPR84Q9NQS5 396 aa2.2□□□□□ -2.06
CALD1-224ENST00000498254 LYRM2Q9NU23 88 aaPredicted RBP2.2□□□□□ -2.06
CALD1-224ENST00000498254 ACER3Q9NUN7 267 aa2.2□□□□□ -2.06
CALD1-224ENST00000498254 DMAC2Q9NW81 257 aa2.2□□□□□ -2.06
CALD1-224ENST00000498254 NAT8Q9UHE5 227 aa2.2□□□□□ -2.06
CALD1-224ENST00000498254 HIGD1AQ9Y241 93 aa2.2□□□□□ -2.06
CALD1-224ENST00000498254 POLR1DQ9Y2S0 133 aa2.2□□□□□ -2.06
CALD1-224ENST00000498254 CTTNBP2Q8WZ74 1663 aa2.2□□□□□ -2.06
CALD1-224ENST00000498254 ADAMTSL1Q8N6G6 1762 aa2.2□□□□□ -2.06
CALD1-224ENST00000498254 TONSLQ96HA7 1378 aa2.2□□□□□ -2.06
CALD1-224ENST00000498254 PZPP20742 1482 aa2.2□□□□□ -2.06
CALD1-224ENST00000498254 FANCD2Q9BXW9 1451 aa2.2□□□□□ -2.06
CALD1-224ENST00000498254 MLH3Q9UHC1 1453 aa2.2□□□□□ -2.06
CALD1-224ENST00000498254 KMT2BQ9UMN6 2715 aaPredicted RBP2.19□□□□□ -2.06
CALD1-224ENST00000498254 VWA8A3KMH1 1905 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 MYH2Q9UKX2 1941 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 PLXND1Q9Y4D7 1925 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 ZFYVE16Q7Z3T8 1539 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 IGLV4-60A0A075B6I1 120 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 IGKV2-28A0A075B6P5 120 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 LOC107984640A0A0U1RRK4 108 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 PNMA8CA0A1B0GUJ8 204 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 DUXBA0A1W2PPF3 345 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 hADV38S2A0JD32 116 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 IFITM5A6NNB3 132 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 LGALS9O00182 355 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 UPK2O00526 184 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 PDCD5O14737 125 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 FFAR1O14842 300 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 COX7A2P2O60397 106 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 OR2H2O95918 312 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 IGKV2D-28P01615 120 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 TTRP02766 147 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 APODP05090 189 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 OR5G3P0C626 314 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 ZNF286BP0CG31 522 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 HLA-EP13747 358 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 CRHBPP24387 322 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 IMPA1P29218 277 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 MIPP30301 263 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 ETV6P41212 452 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 GNG4P50150 75 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 AKR1C2P52895 323 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 AQP4P55087 323 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 FOXA1P55317 472 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 RBM11P57052 281 aaKnown RBP2.19□□□□□ -2.06
CALD1-224ENST00000498254 KRTAP12-2P59991 146 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 SNRPD2P62316 118 aaKnown RBP2.19□□□□□ -2.06
CALD1-224ENST00000498254 RPS28P62857 69 aaKnown RBP2.19□□□□□ -2.06
CALD1-224ENST00000498254 TNFAIP6P98066 277 aaPredicted RBP2.19□□□□□ -2.06
CALD1-224ENST00000498254 PRDX4Q13162 271 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 EIF4EBP1Q13541 118 aaPredicted RBP2.19□□□□□ -2.06
CALD1-224ENST00000498254 PMAIP1Q13794 54 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 CLLU1OSQ5K130 101 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 ZNF678Q5SXM1 525 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 BCL2L15Q5TBC7 163 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 ZNF705AQ6ZN79 300 aaPredicted RBP2.19□□□□□ -2.06
CALD1-224ENST00000498254 DGAT2L6Q6ZPD8 337 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 LINC00299Q6ZSB3 139 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 GTF2H5Q6ZYL4 71 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 GKN2Q86XP6 184 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 TMEM86AQ8N2M4 240 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 EXOC3-AS1Q8N2X6 119 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 MIR7-3HGQ8N6C7 128 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 FER1L6-AS1Q8NA97 138 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 C5orf17Q8NAS9 161 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 OR51A4Q8NGJ6 313 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 OR5H2Q8NGV7 314 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 OR2T27Q8NH04 317 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 RTN4IP1Q8WWV3 396 aaPredicted RBP2.19□□□□□ -2.06
CALD1-224ENST00000498254 KLK6Q92876 244 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 PITX2Q99697 317 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 DERL1Q9BUN8 251 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 OR8D2Q9GZM6 311 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 SH3BGRL3Q9H299 93 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 LINC00574Q9H8X3 128 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 COMMD9Q9P000 198 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 AP4S1Q9Y587 144 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 PCYT1BQ9Y5K3 369 aaPredicted RBP2.19□□□□□ -2.06
CALD1-224ENST00000498254 ANKRD26Q9UPS8 1709 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 CCDC88BA6NC98 1476 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 ADGRL2O95490 1459 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 CEP164Q9UPV0 1460 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 ECM29Q5VYK3 1845 aa2.19□□□□□ -2.06
CALD1-224ENST00000498254 XIRP1Q702N8 1843 aaKnown RBP2.19□□□□□ -2.06
CALD1-224ENST00000498254 TRAPPC8Q9Y2L5 1435 aa2.18□□□□□ -2.06
CALD1-224ENST00000498254 ZNF106Q9H2Y7 1883 aaKnown RBP2.18□□□□□ -2.06
CALD1-224ENST00000498254 TRAV8-3A0A0A6YYJ7 113 aa2.18□□□□□ -2.06
CALD1-224ENST00000498254 C9JQL5 133 aa2.18□□□□□ -2.06
CALD1-224ENST00000498254 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.18□□□□□ -2.06
CALD1-224ENST00000498254 RPL36A-HNRNPH2H7BZ11 118 aa2.18□□□□□ -2.06
CALD1-224ENST00000498254 H7C1C5 153 aa2.18□□□□□ -2.06
CALD1-224ENST00000498254 HRASP01112 189 aa2.18□□□□□ -2.06
CALD1-224ENST00000498254 KRASP01116 189 aa2.18□□□□□ -2.06
CALD1-224ENST00000498254 CTSDP07339 412 aaPredicted RBP2.18□□□□□ -2.06
CALD1-224ENST00000498254 SOD3P08294 240 aa2.18□□□□□ -2.06
CALD1-224ENST00000498254 IL3P08700 152 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms