RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 NAA38Q9BRA0 125 aaKnown RBP1.49□□□□□ -2.17
SMC4-225ENST00000497203 OR51V1Q9H2C8 321 aa1.49□□□□□ -2.17
SMC4-225ENST00000497203 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.49□□□□□ -2.17
SMC4-225ENST00000497203 CMTM6Q9NX76 183 aa1.49□□□□□ -2.17
SMC4-225ENST00000497203 KIF13BQ9NQT8 1826 aa1.49□□□□□ -2.17
SMC4-225ENST00000497203 MYH11P35749 1972 aa1.48□□□□□ -2.17
SMC4-225ENST00000497203 NUP155O75694 1391 aa1.48□□□□□ -2.17
SMC4-225ENST00000497203 DOCK5Q9H7D0 1870 aa1.48□□□□□ -2.17
SMC4-225ENST00000497203 CIAO1O76071 339 aa1.48□□□□□ -2.17
SMC4-225ENST00000497203 TTRP02766 147 aa1.48□□□□□ -2.17
SMC4-225ENST00000497203 RPS4Y1P22090 263 aaKnown RBP1.48□□□□□ -2.17
SMC4-225ENST00000497203 MAGEA12P43365 314 aa1.48□□□□□ -2.17
SMC4-225ENST00000497203 ZNF80P51504 273 aaPredicted RBP1.48□□□□□ -2.17
SMC4-225ENST00000497203 HBA1P69905 142 aa1.48□□□□□ -2.17
SMC4-225ENST00000497203 ELOBQ15370 118 aa1.48□□□□□ -2.17
SMC4-225ENST00000497203 SPANXN3Q5MJ09 141 aa1.48□□□□□ -2.17
SMC4-225ENST00000497203 C7orf65Q6ZTY9 151 aa1.48□□□□□ -2.17
SMC4-225ENST00000497203 RPS19BP1Q86WX3 136 aaKnown RBP1.48□□□□□ -2.17
SMC4-225ENST00000497203 DEFB119Q8N690 84 aa1.48□□□□□ -2.17
SMC4-225ENST00000497203 ZNF565Q8N9K5 539 aa1.48□□□□□ -2.17
SMC4-225ENST00000497203 OR5B17Q8NGF7 314 aa1.48□□□□□ -2.17
SMC4-225ENST00000497203 OR13C4Q8NGS5 318 aa1.48□□□□□ -2.17
SMC4-225ENST00000497203 RASSF5Q8WWW0 418 aa1.48□□□□□ -2.17
SMC4-225ENST00000497203 KLK6Q92876 244 aa1.48□□□□□ -2.17
SMC4-225ENST00000497203 C8orf76Q96K31 380 aa1.48□□□□□ -2.17
SMC4-225ENST00000497203 NIPSNAP1Q9BPW8 284 aa1.48□□□□□ -2.17
SMC4-225ENST00000497203 CMSS1Q9BQ75 279 aaKnown RBP1.48□□□□□ -2.17
SMC4-225ENST00000497203 DERL1Q9BUN8 251 aa1.48□□□□□ -2.17
SMC4-225ENST00000497203 FBXL12Q9NXK8 326 aa1.48□□□□□ -2.17
SMC4-225ENST00000497203 MRPL27Q9P0M9 148 aaKnown RBP1.48□□□□□ -2.17
SMC4-225ENST00000497203 AMMECR1Q9Y4X0 333 aaPredicted RBP1.48□□□□□ -2.17
SMC4-225ENST00000497203 CCDC88CQ9P219 2028 aa1.47□□□□□ -2.17
SMC4-225ENST00000497203 SDCBPO00560 298 aaPredicted RBP1.47□□□□□ -2.17
SMC4-225ENST00000497203 IFNA10P01566 189 aa1.47□□□□□ -2.17
SMC4-225ENST00000497203 ZNF705BP0CI00 300 aaPredicted RBP1.47□□□□□ -2.17
SMC4-225ENST00000497203 RPL5P46777 297 aaKnown RBP1.47□□□□□ -2.17
SMC4-225ENST00000497203 EIF2B2P49770 351 aaKnown RBP1.47□□□□□ -2.17
SMC4-225ENST00000497203 EDDM3AQ14507 147 aa1.47□□□□□ -2.17
SMC4-225ENST00000497203 KCNJ8Q15842 424 aa1.47□□□□□ -2.17
SMC4-225ENST00000497203 DHFR2Q86XF0 187 aa1.47□□□□□ -2.17
SMC4-225ENST00000497203 OR8B3Q8NGG8 313 aa1.47□□□□□ -2.17
SMC4-225ENST00000497203 BORCS7Q96B45 105 aa1.47□□□□□ -2.17
SMC4-225ENST00000497203 TOMM6Q96B49 74 aa1.47□□□□□ -2.17
SMC4-225ENST00000497203 SLC22A13Q9Y226 551 aa1.47□□□□□ -2.17
SMC4-225ENST00000497203 PKIGQ9Y2B9 76 aa1.47□□□□□ -2.17
SMC4-225ENST00000497203 TMEM56-RWDD3S4R434 201 aa1.47□□□□□ -2.17
SMC4-225ENST00000497203 WRNQ14191 1432 aaPredicted RBP eCLIP1.47□□□□□ -2.17
SMC4-225ENST00000497203 FREM1Q5H8C1 2179 aa1.47□□□□□ -2.17
SMC4-225ENST00000497203 PCDH15Q96QU1 1955 aa1.47□□□□□ -2.17
SMC4-225ENST00000497203 TRAV9-1A0A075B6T8 112 aa1.46□□□□□ -2.18
SMC4-225ENST00000497203 OR4C46A6NHA9 309 aa1.46□□□□□ -2.18
SMC4-225ENST00000497203 TRAPPC2LH3BP13 241 aa1.46□□□□□ -2.18
SMC4-225ENST00000497203 FAAHO00519 579 aa1.46□□□□□ -2.18
SMC4-225ENST00000497203 CRYZL1O95825 349 aa1.46□□□□□ -2.18
SMC4-225ENST00000497203 CRPP02741 224 aa1.46□□□□□ -2.18
SMC4-225ENST00000497203 TCRBP04435 133 aa1.46□□□□□ -2.18
SMC4-225ENST00000497203 GPX2P18283 190 aa1.46□□□□□ -2.18
SMC4-225ENST00000497203 LSM6P62312 80 aaKnown RBP1.46□□□□□ -2.18
SMC4-225ENST00000497203 SRSF6Q13247 344 aaKnown RBP1.46□□□□□ -2.18
SMC4-225ENST00000497203 MOGQ16653 247 aa1.46□□□□□ -2.18
SMC4-225ENST00000497203 ARHGAP11BQ3KRB8 267 aa1.46□□□□□ -2.18
SMC4-225ENST00000497203 TMEM106AQ96A25 262 aa1.46□□□□□ -2.18
SMC4-225ENST00000497203 TSPAN32Q96QS1 320 aa1.46□□□□□ -2.18
SMC4-225ENST00000497203 TRIM4Q9C037 500 aa1.46□□□□□ -2.18
SMC4-225ENST00000497203 BAIAP2Q9UQB8 552 aa1.46□□□□□ -2.18
SMC4-225ENST00000497203 SMARCA4P51532 1647 aa1.46□□□□□ -2.18
SMC4-225ENST00000497203 NCOA1Q15788 1441 aa1.46□□□□□ -2.18
SMC4-225ENST00000497203 MTUS2Q5JR59 1369 aa1.46□□□□□ -2.18
SMC4-225ENST00000497203 COL4A1P02462 1669 aa1.45□□□□□ -2.18
SMC4-225ENST00000497203 EXOC1LA0A1B0GW35 172 aa1.45□□□□□ -2.18
SMC4-225ENST00000497203 IGKV2-29A2NJV5 120 aaPredicted RBP1.45□□□□□ -2.18
SMC4-225ENST00000497203 TRAPPC13A5PLN9 417 aa1.45□□□□□ -2.18
SMC4-225ENST00000497203 DPRXA6NFQ7 191 aa1.45□□□□□ -2.18
SMC4-225ENST00000497203 TMEM114B3SHH9 223 aa1.45□□□□□ -2.18
SMC4-225ENST00000497203 IGKV1-5P01602 117 aa1.45□□□□□ -2.18
SMC4-225ENST00000497203 PRB1P04280 392 aa1.45□□□□□ -2.18
SMC4-225ENST00000497203 RPSAP08865 295 aaKnown RBP1.45□□□□□ -2.18
SMC4-225ENST00000497203 RANP62826 216 aaKnown RBP1.45□□□□□ -2.18
SMC4-225ENST00000497203 SUPT4H1P63272 117 aaKnown RBP1.45□□□□□ -2.18
SMC4-225ENST00000497203 CCL7P80098 99 aa1.45□□□□□ -2.18
SMC4-225ENST00000497203 SPA17Q15506 151 aa1.45□□□□□ -2.18
SMC4-225ENST00000497203 Q1T7F1 81 aa1.45□□□□□ -2.18
SMC4-225ENST00000497203 IAH1Q2TAA2 248 aaPredicted RBP1.45□□□□□ -2.18
SMC4-225ENST00000497203 AKIRIN2Q53H80 203 aa1.45□□□□□ -2.18
SMC4-225ENST00000497203 OR6V1Q8N148 313 aa1.45□□□□□ -2.18
SMC4-225ENST00000497203 SCGB3A1Q96QR1 104 aa1.45□□□□□ -2.18
SMC4-225ENST00000497203 MRPL32Q9BYC8 188 aaKnown RBP1.45□□□□□ -2.18
SMC4-225ENST00000497203 C20orf27Q9GZN8 174 aa1.45□□□□□ -2.18
SMC4-225ENST00000497203 SDK1Q7Z5N4 2213 aa1.45□□□□□ -2.18
SMC4-225ENST00000497203 MUC6Q6W4X9 2439 aa1.45□□□□□ -2.18
SMC4-225ENST00000497203 PRRC2BQ5JSZ5 2229 aaKnown RBP1.44□□□□□ -2.18
SMC4-225ENST00000497203 OTOGLQ3ZCN5 2332 aa1.44□□□□□ -2.18
SMC4-225ENST00000497203 BRWD1Q9NSI6 2320 aa1.44□□□□□ -2.18
SMC4-225ENST00000497203 TRAV26-2A0A0B4J265 109 aa1.44□□□□□ -2.18
SMC4-225ENST00000497203 TRBV6-5A0A0K0K1A5 114 aa1.44□□□□□ -2.18
SMC4-225ENST00000497203 SMIM9A6NGZ8 99 aa1.44□□□□□ -2.18
SMC4-225ENST00000497203 IBA57-AS1B1ANH7 110 aa1.44□□□□□ -2.18
SMC4-225ENST00000497203 PIRO00625 290 aa1.44□□□□□ -2.18
SMC4-225ENST00000497203 PMP2P02689 132 aa1.44□□□□□ -2.18
SMC4-225ENST00000497203 AP3S2P59780 193 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms