RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 UBQLN2Q9UHD9 624 aa9.67□□□□□ -0.86
FN1-226ENST00000496542 DBX1A6NMT0 343 aa9.66□□□□□ -0.86
FN1-226ENST00000496542 C15orf61A6NNL5 157 aa9.66□□□□□ -0.86
FN1-226ENST00000496542 K7EIM0 57 aa9.66□□□□□ -0.86
FN1-226ENST00000496542 NDUFA4O00483 81 aa9.66□□□□□ -0.86
FN1-226ENST00000496542 ZNF207O43670 478 aaKnown RBP9.66□□□□□ -0.86
FN1-226ENST00000496542 APOA1P02647 267 aa9.66□□□□□ -0.86
FN1-226ENST00000496542 VBP1P61758 197 aa9.66□□□□□ -0.86
FN1-226ENST00000496542 SPSB3Q6PJ21 355 aa9.66□□□□□ -0.86
FN1-226ENST00000496542 TBC1D26Q86UD7 250 aa9.66□□□□□ -0.86
FN1-226ENST00000496542 OR2C3Q8N628 320 aa9.66□□□□□ -0.86
FN1-226ENST00000496542 OR5B3Q8NH48 314 aa9.66□□□□□ -0.86
FN1-226ENST00000496542 TMEM56Q96MV1 263 aa9.66□□□□□ -0.86
FN1-226ENST00000496542 TSC22D3Q99576 134 aa9.66□□□□□ -0.86
FN1-226ENST00000496542 SPAG8Q99932 426 aaPredicted RBP9.66□□□□□ -0.86
FN1-226ENST00000496542 FUNDC2Q9BWH2 189 aa9.66□□□□□ -0.86
FN1-226ENST00000496542 SCPEP1Q9HB40 452 aa9.66□□□□□ -0.86
FN1-226ENST00000496542 TMEM14BQ9NUH8 114 aa9.66□□□□□ -0.86
FN1-226ENST00000496542 FKBP11Q9NYL4 201 aa9.66□□□□□ -0.86
FN1-226ENST00000496542 PLECQ15149 4684 aaKnown RBP9.66□□□□□ -0.86
FN1-226ENST00000496542 F8W735 103 aaPredicted RBP9.65□□□□□ -0.86
FN1-226ENST00000496542 RCVRNP35243 200 aa9.65□□□□□ -0.86
FN1-226ENST00000496542 ADMP35318 185 aa9.65□□□□□ -0.86
FN1-226ENST00000496542 RNASE12Q5GAN4 147 aaKnown RBP9.65□□□□□ -0.86
FN1-226ENST00000496542 DMRTA1Q5VZB9 504 aa9.65□□□□□ -0.86
FN1-226ENST00000496542 LAMTOR1Q6IAA8 161 aa9.65□□□□□ -0.86
FN1-226ENST00000496542 LPCAT3Q6P1A2 487 aa9.65□□□□□ -0.86
FN1-226ENST00000496542 CADM3Q8N126 398 aa9.65□□□□□ -0.86
FN1-226ENST00000496542 MISP3Q96FF7 219 aa9.65□□□□□ -0.86
FN1-226ENST00000496542 OVOL2Q9BRP0 275 aa9.65□□□□□ -0.86
FN1-226ENST00000496542 EPPK1P58107 5090 aaKnown RBP9.64□□□□□ -0.87
FN1-226ENST00000496542 M0QYG6 137 aa9.64□□□□□ -0.87
FN1-226ENST00000496542 TSPAN4O14817 238 aa9.64□□□□□ -0.87
FN1-226ENST00000496542 HPGDSO60760 199 aa9.64□□□□□ -0.87
FN1-226ENST00000496542 ELK1P19419 428 aa9.64□□□□□ -0.87
FN1-226ENST00000496542 H2BFWTQ7Z2G1 175 aa9.64□□□□□ -0.87
FN1-226ENST00000496542 OR1P1Q8NH06 330 aa9.64□□□□□ -0.87
FN1-226ENST00000496542 OR4A16Q8NH70 328 aa9.64□□□□□ -0.87
FN1-226ENST00000496542 MRGPRFQ96AM1 343 aa9.64□□□□□ -0.87
FN1-226ENST00000496542 SEC22AQ96IW7 307 aa9.64□□□□□ -0.87
FN1-226ENST00000496542 ATP6V0BQ99437 205 aa9.64□□□□□ -0.87
FN1-226ENST00000496542 FAM212BQ9NTI7 297 aaPredicted RBP9.64□□□□□ -0.87
FN1-226ENST00000496542 HYDINQ4G0P3 5121 aa9.64□□□□□ -0.87
FN1-226ENST00000496542 FAM25AB3EWG3 89 aa9.63□□□□□ -0.87
FN1-226ENST00000496542 FAM25CB3EWG5 89 aa9.63□□□□□ -0.87
FN1-226ENST00000496542 FAM25GB3EWG6 89 aa9.63□□□□□ -0.87
FN1-226ENST00000496542 IGKV1-39P01597 117 aa9.63□□□□□ -0.87
FN1-226ENST00000496542 IGKV1D-39P04432 117 aa9.63□□□□□ -0.87
FN1-226ENST00000496542 APOC4P55056 127 aa9.63□□□□□ -0.87
FN1-226ENST00000496542 ODF3L2Q3SX64 289 aa9.63□□□□□ -0.87
FN1-226ENST00000496542 CMTM3Q96MX0 182 aa9.63□□□□□ -0.87
FN1-226ENST00000496542 IGHV3-49A0A0A0MS15 119 aa9.62□□□□□ -0.87
FN1-226ENST00000496542 OR4C46A6NHA9 309 aa9.62□□□□□ -0.87
FN1-226ENST00000496542 C15orf62A8K5M9 175 aa9.62□□□□□ -0.87
FN1-226ENST00000496542 K7EMT4 169 aa9.62□□□□□ -0.87
FN1-226ENST00000496542 NUPL2O15504 423 aaKnown RBP9.62□□□□□ -0.87
FN1-226ENST00000496542 YIF1AO95070 293 aa9.62□□□□□ -0.87
FN1-226ENST00000496542 IGHV3-48P01763 117 aa9.62□□□□□ -0.87
FN1-226ENST00000496542 CTSDP07339 412 aaPredicted RBP9.62□□□□□ -0.87
FN1-226ENST00000496542 CTSGP08311 255 aa9.62□□□□□ -0.87
FN1-226ENST00000496542 PGAM2P15259 253 aa9.62□□□□□ -0.87
FN1-226ENST00000496542 UCP3P55916 312 aa9.62□□□□□ -0.87
FN1-226ENST00000496542 PRCDQ00LT1 54 aa9.62□□□□□ -0.87
FN1-226ENST00000496542 RELQ04864 619 aaPredicted RBP9.62□□□□□ -0.87
FN1-226ENST00000496542 DEFB135Q30KP9 77 aa9.62□□□□□ -0.87
FN1-226ENST00000496542 SPINK9Q5DT21 86 aa9.62□□□□□ -0.87
FN1-226ENST00000496542 IGHV7-4-1A0A0J9YVY3 117 aa9.61□□□□□ -0.87
FN1-226ENST00000496542 A0A0J9YWU9 116 aa9.61□□□□□ -0.87
FN1-226ENST00000496542 I3L2K1 104 aa9.61□□□□□ -0.87
FN1-226ENST00000496542 MT-CO2P00403 227 aa9.61□□□□□ -0.87
FN1-226ENST00000496542 RPL35AP18077 110 aaKnown RBP9.61□□□□□ -0.87
FN1-226ENST00000496542 PI3P19957 117 aa9.61□□□□□ -0.87
FN1-226ENST00000496542 RORCP51449 518 aa9.61□□□□□ -0.87
FN1-226ENST00000496542 MFAP4P55083 255 aa9.61□□□□□ -0.87
FN1-226ENST00000496542 PMS2P11Q13670 270 aa9.61□□□□□ -0.87
FN1-226ENST00000496542 IZUMO4Q1ZYL8 232 aa9.61□□□□□ -0.87
FN1-226ENST00000496542 MZT2AQ6P582 158 aa9.61□□□□□ -0.87
FN1-226ENST00000496542 PINX1Q96BK5 328 aaKnown RBP9.61□□□□□ -0.87
FN1-226ENST00000496542 RNF2Q99496 336 aa9.61□□□□□ -0.87
FN1-226ENST00000496542 SMPXQ9UHP9 88 aa9.61□□□□□ -0.87
FN1-226ENST00000496542 BIRC6Q9NR09 4857 aa9.6□□□□□ -0.87
FN1-226ENST00000496542 IGKV3-7A0A075B6H7 116 aa9.6□□□□□ -0.87
FN1-226ENST00000496542 CXorf65A6NEN9 183 aa9.6□□□□□ -0.87
FN1-226ENST00000496542 SPRY2O43597 315 aa9.6□□□□□ -0.87
FN1-226ENST00000496542 TFPI2P48307 235 aa9.6□□□□□ -0.87
FN1-226ENST00000496542 PPP5CP53041 499 aa9.6□□□□□ -0.87
FN1-226ENST00000496542 HSPE1P61604 102 aaKnown RBP9.6□□□□□ -0.87
FN1-226ENST00000496542 ERHP84090 104 aaKnown RBP9.6□□□□□ -0.87
FN1-226ENST00000496542 RNASE10Q5GAN6 216 aaKnown RBP9.6□□□□□ -0.87
FN1-226ENST00000496542 Q6ZWC4 215 aa9.6□□□□□ -0.87
FN1-226ENST00000496542 STPG3Q8N7X2 389 aa9.6□□□□□ -0.87
FN1-226ENST00000496542 ZNF114Q8NC26 417 aa9.6□□□□□ -0.87
FN1-226ENST00000496542 TMEM116Q8NCL8 245 aa9.6□□□□□ -0.87
FN1-226ENST00000496542 ZNF414Q96IQ9 312 aa9.6□□□□□ -0.87
FN1-226ENST00000496542 RHPN1-AS1Q9BWJ2 59 aa9.6□□□□□ -0.87
FN1-226ENST00000496542 NAA50Q9GZZ1 169 aaKnown RBP9.6□□□□□ -0.87
FN1-226ENST00000496542 IGHV3OR16-13A0A075B7E8 117 aa9.59□□□□□ -0.87
FN1-226ENST00000496542 IGHV3-74A0A0B4J1X5 117 aa9.59□□□□□ -0.87
FN1-226ENST00000496542 UBE2CO00762 179 aa9.59□□□□□ -0.87
FN1-226ENST00000496542 CHEK1O14757 476 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms