RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 KPRPQ5T749 579 aaPredicted RBP2.01□□□□□ -2.09
CLK1-214ENST00000496205 ZNF322Q6U7Q0 402 aaPredicted RBP2.01□□□□□ -2.09
CLK1-214ENST00000496205 SPINT4Q6UDR6 99 aa2.01□□□□□ -2.09
CLK1-214ENST00000496205 SDIM1Q6ZPB5 146 aa2.01□□□□□ -2.09
CLK1-214ENST00000496205 MUC7Q8TAX7 377 aa2.01□□□□□ -2.09
CLK1-214ENST00000496205 SLC25A40Q8TBP6 338 aa2.01□□□□□ -2.09
CLK1-214ENST00000496205 LMX1AQ8TE12 382 aa2.01□□□□□ -2.09
CLK1-214ENST00000496205 DEDD2Q8WXF8 326 aa2.01□□□□□ -2.09
CLK1-214ENST00000496205 IGF2BP2-AS1Q96M15 143 aa2.01□□□□□ -2.09
CLK1-214ENST00000496205 ERMAPQ96PL5 475 aaPredicted RBP2.01□□□□□ -2.09
CLK1-214ENST00000496205 HSPB9Q9BQS6 159 aa2.01□□□□□ -2.09
CLK1-214ENST00000496205 SEC22CQ9BRL7 303 aa2.01□□□□□ -2.09
CLK1-214ENST00000496205 AICDAQ9GZX7 198 aa2.01□□□□□ -2.09
CLK1-214ENST00000496205 OR5V1Q9UGF6 321 aa2.01□□□□□ -2.09
CLK1-214ENST00000496205 ERGIC3Q9Y282 383 aa2.01□□□□□ -2.09
CLK1-214ENST00000496205 A0A0B4J2C4 111 aa2□□□□□ -2.09
CLK1-214ENST00000496205 DUXBA0A1W2PPF3 345 aa2□□□□□ -2.09
CLK1-214ENST00000496205 I3L521 148 aa2□□□□□ -2.09
CLK1-214ENST00000496205 CDS2O95674 445 aa2□□□□□ -2.09
CLK1-214ENST00000496205 IGHV1-69P01742 117 aa2□□□□□ -2.09
CLK1-214ENST00000496205 CCL3P10147 92 aa2□□□□□ -2.09
CLK1-214ENST00000496205 ZNF14P17017 642 aaPredicted RBP2□□□□□ -2.09
CLK1-214ENST00000496205 CD24P25063 80 aa2□□□□□ -2.09
CLK1-214ENST00000496205 CASP1P29466 404 aa2□□□□□ -2.09
CLK1-214ENST00000496205 GLRXP35754 106 aa2□□□□□ -2.09
CLK1-214ENST00000496205 LPAR6P43657 344 aa2□□□□□ -2.09
CLK1-214ENST00000496205 ATP5G3P48201 142 aa2□□□□□ -2.09
CLK1-214ENST00000496205 SRP9P49458 86 aaKnown RBP2□□□□□ -2.09
CLK1-214ENST00000496205 PIGPP57054 158 aa2□□□□□ -2.09
CLK1-214ENST00000496205 RPS28P62857 69 aaKnown RBP2□□□□□ -2.09
CLK1-214ENST00000496205 SURF2Q15527 256 aaPredicted RBP2□□□□□ -2.09
CLK1-214ENST00000496205 LGALSLQ3ZCW2 172 aaPredicted RBP2□□□□□ -2.09
CLK1-214ENST00000496205 EIF4E3Q8N5X7 224 aaKnown RBP2□□□□□ -2.09
CLK1-214ENST00000496205 RNF182Q8N6D2 247 aa2□□□□□ -2.09
CLK1-214ENST00000496205 OR10D4PQ8NGN7 298 aa2□□□□□ -2.09
CLK1-214ENST00000496205 GRPEL2Q8TAA5 225 aa2□□□□□ -2.09
CLK1-214ENST00000496205 RPS4Y2Q8TD47 263 aa2□□□□□ -2.09
CLK1-214ENST00000496205 MBD3L1Q8WWY6 194 aa2□□□□□ -2.09
CLK1-214ENST00000496205 LZICQ8WZA0 190 aa2□□□□□ -2.09
CLK1-214ENST00000496205 H1FXQ92522 213 aaKnown RBP2□□□□□ -2.09
CLK1-214ENST00000496205 RNASE6Q93091 150 aaKnown RBP2□□□□□ -2.09
CLK1-214ENST00000496205 TCEAL4Q96EI5 215 aa2□□□□□ -2.09
CLK1-214ENST00000496205 EFCAB11Q9BUY7 163 aa2□□□□□ -2.09
CLK1-214ENST00000496205 RTL8AQ9BWD3 113 aa2□□□□□ -2.09
CLK1-214ENST00000496205 TUBA4BQ9H853 241 aa2□□□□□ -2.09
CLK1-214ENST00000496205 MED29Q9NX70 200 aa2□□□□□ -2.09
CLK1-214ENST00000496205 IL36BQ9NZH7 164 aa2□□□□□ -2.09
CLK1-214ENST00000496205 FUT9Q9Y231 359 aa2□□□□□ -2.09
CLK1-214ENST00000496205 CYSLTR1Q9Y271 337 aa2□□□□□ -2.09
CLK1-214ENST00000496205 U3KQK5 164 aa2□□□□□ -2.09
CLK1-214ENST00000496205 ADAMTSL1Q8N6G6 1762 aa2□□□□□ -2.09
CLK1-214ENST00000496205 ARAP1Q96P48 1450 aa2□□□□□ -2.09
CLK1-214ENST00000496205 DOCK3Q8IZD9 2030 aa2□□□□□ -2.09
CLK1-214ENST00000496205 CEP152O94986 1710 aa2□□□□□ -2.09
CLK1-214ENST00000496205 ARHGEF10O15013 1369 aa1.99□□□□□ -2.09
CLK1-214ENST00000496205 KIF26AQ9ULI4 1882 aaPredicted RBP1.99□□□□□ -2.09
CLK1-214ENST00000496205 BORCS7-ASMTA0A0B4J1R7 106 aa1.99□□□□□ -2.09
CLK1-214ENST00000496205 IGHV3-73A0A0B4J1V6 119 aa1.99□□□□□ -2.09
CLK1-214ENST00000496205 TMEM235A6NFC5 223 aa1.99□□□□□ -2.09
CLK1-214ENST00000496205 LY6HO94772 140 aa1.99□□□□□ -2.09
CLK1-214ENST00000496205 SMIM17P0DL12 118 aa1.99□□□□□ -2.09
CLK1-214ENST00000496205 S100A4P26447 101 aaKnown RBP1.99□□□□□ -2.09
CLK1-214ENST00000496205 DEFA1P59665 94 aa1.99□□□□□ -2.09
CLK1-214ENST00000496205 YPEL3P61236 119 aaPredicted RBP1.99□□□□□ -2.09
CLK1-214ENST00000496205 RPS11P62280 158 aaKnown RBP eCLIP1.99□□□□□ -2.09
CLK1-214ENST00000496205 RBX1P62877 108 aa1.99□□□□□ -2.09
CLK1-214ENST00000496205 RPL18Q07020 188 aaKnown RBP1.99□□□□□ -2.09
CLK1-214ENST00000496205 SPANXN3Q5MJ09 141 aa1.99□□□□□ -2.09
CLK1-214ENST00000496205 DNLZQ5SXM8 178 aa1.99□□□□□ -2.09
CLK1-214ENST00000496205 IGFL1Q6UW32 110 aa1.99□□□□□ -2.09
CLK1-214ENST00000496205 ADM2Q7Z4H4 148 aa1.99□□□□□ -2.09
CLK1-214ENST00000496205 SPATA12Q7Z6I5 190 aa1.99□□□□□ -2.09
CLK1-214ENST00000496205 DHFR2Q86XF0 187 aa1.99□□□□□ -2.09
CLK1-214ENST00000496205 CNEP1R1Q8N9A8 125 aa1.99□□□□□ -2.09
CLK1-214ENST00000496205 CLDND2Q8NHS1 167 aa1.99□□□□□ -2.09
CLK1-214ENST00000496205 SMCR5Q8TEV8 140 aa1.99□□□□□ -2.09
CLK1-214ENST00000496205 ISOC1Q96CN7 298 aa1.99□□□□□ -2.09
CLK1-214ENST00000496205 DOHHQ9BU89 302 aa1.99□□□□□ -2.09
CLK1-214ENST00000496205 SCRT1Q9BWW7 348 aa1.99□□□□□ -2.09
CLK1-214ENST00000496205 MCTS1Q9ULC4 181 aaKnown RBP1.99□□□□□ -2.09
CLK1-214ENST00000496205 PAIP2BQ9ULR5 123 aaKnown RBP1.99□□□□□ -2.09
CLK1-214ENST00000496205 ZNF443Q9Y2A4 671 aaPredicted RBP1.99□□□□□ -2.09
CLK1-214ENST00000496205 LAMTOR2Q9Y2Q5 125 aa1.99□□□□□ -2.09
CLK1-214ENST00000496205 MYH3P11055 1940 aa1.99□□□□□ -2.09
CLK1-214ENST00000496205 MYH2Q9UKX2 1941 aa1.99□□□□□ -2.09
CLK1-214ENST00000496205 SPATA31E1Q6ZUB1 1445 aa1.99□□□□□ -2.09
CLK1-214ENST00000496205 KIF13BQ9NQT8 1826 aa1.98□□□□□ -2.09
CLK1-214ENST00000496205 IGLV2-18A0A075B6J9 118 aa1.98□□□□□ -2.09
CLK1-214ENST00000496205 IGKV1D-37A0A075B6S9 117 aa1.98□□□□□ -2.09
CLK1-214ENST00000496205 FABP5P3A8MUU1 101 aa1.98□□□□□ -2.09
CLK1-214ENST00000496205 GGCTO75223 188 aaKnown RBP1.98□□□□□ -2.09
CLK1-214ENST00000496205 BANF1O75531 89 aa1.98□□□□□ -2.09
CLK1-214ENST00000496205 IGKV1-5P01602 117 aa1.98□□□□□ -2.09
CLK1-214ENST00000496205 UCHL1P09936 223 aa1.98□□□□□ -2.09
CLK1-214ENST00000496205 OGNP20774 298 aaKnown RBP1.98□□□□□ -2.09
CLK1-214ENST00000496205 COL8A2P25067 703 aa1.98□□□□□ -2.09
CLK1-214ENST00000496205 PSMD8P48556 350 aa1.98□□□□□ -2.09
CLK1-214ENST00000496205 EMP1P54849 157 aa1.98□□□□□ -2.09
CLK1-214ENST00000496205 FOXA1P55317 472 aa1.98□□□□□ -2.09
CLK1-214ENST00000496205 TPI1P60174 286 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms