RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 ECM29Q5VYK3 1845 aa2.79□□□□□ -1.96
CCDC39-207ENST00000495817 NUP210LQ5VU65 1888 aa2.78□□□□□ -1.96
CCDC39-207ENST00000495817 A0A1W2PNM2 257 aa2.78□□□□□ -1.96
CCDC39-207ENST00000495817 CLDN24A6NM45 220 aa2.78□□□□□ -1.96
CCDC39-207ENST00000495817 MIF4GDA9UHW6 222 aaKnown RBP2.78□□□□□ -1.96
CCDC39-207ENST00000495817 SSNA1O43805 119 aa2.78□□□□□ -1.96
CCDC39-207ENST00000495817 ZNF22P17026 224 aaPredicted RBP2.78□□□□□ -1.96
CCDC39-207ENST00000495817 IFNGR2P38484 337 aa2.78□□□□□ -1.96
CCDC39-207ENST00000495817 H2BFSP57053 126 aa2.78□□□□□ -1.96
CCDC39-207ENST00000495817 TAS2R41P59536 307 aa2.78□□□□□ -1.96
CCDC39-207ENST00000495817 POU6F1Q14863 301 aa2.78□□□□□ -1.96
CCDC39-207ENST00000495817 PDGFRLQ15198 375 aa2.78□□□□□ -1.96
CCDC39-207ENST00000495817 Q6ZRU5 148 aa2.78□□□□□ -1.96
CCDC39-207ENST00000495817 SCXQ7RTU7 201 aa2.78□□□□□ -1.96
CCDC39-207ENST00000495817 CLDN22Q8N7P3 220 aa2.78□□□□□ -1.96
CCDC39-207ENST00000495817 TMEM75Q8N9X5 138 aa2.78□□□□□ -1.96
CCDC39-207ENST00000495817 PPCDCQ96CD2 204 aa2.78□□□□□ -1.96
CCDC39-207ENST00000495817 MED18Q9BUE0 208 aa2.78□□□□□ -1.96
CCDC39-207ENST00000495817 TIPINQ9BVW5 301 aa2.78□□□□□ -1.96
CCDC39-207ENST00000495817 PECRQ9BY49 303 aa2.78□□□□□ -1.96
CCDC39-207ENST00000495817 MAP1LC3AQ9H492 121 aa2.78□□□□□ -1.96
CCDC39-207ENST00000495817 HHLA2Q9UM44 414 aa2.78□□□□□ -1.96
CCDC39-207ENST00000495817 ASB4Q9Y574 426 aa2.78□□□□□ -1.96
CCDC39-207ENST00000495817 A0A1B0GUL6 1792 aa2.78□□□□□ -1.96
CCDC39-207ENST00000495817 ATAD5Q96QE3 1844 aa2.77□□□□□ -1.97
CCDC39-207ENST00000495817 SDK2Q58EX2 2172 aa2.77□□□□□ -1.97
CCDC39-207ENST00000495817 CCDC171Q6TFL3 1326 aa2.77□□□□□ -1.97
CCDC39-207ENST00000495817 ZNF878C9JN71 531 aa2.77□□□□□ -1.97
CCDC39-207ENST00000495817 S1PR2O95136 353 aa2.77□□□□□ -1.97
CCDC39-207ENST00000495817 HBZP02008 142 aa2.77□□□□□ -1.97
CCDC39-207ENST00000495817 ORM2P19652 201 aa2.77□□□□□ -1.97
CCDC39-207ENST00000495817 ALOX5APP20292 161 aa2.77□□□□□ -1.97
CCDC39-207ENST00000495817 RPL12P30050 165 aaKnown RBP2.77□□□□□ -1.97
CCDC39-207ENST00000495817 BSPH1Q075Z2 132 aa2.77□□□□□ -1.97
CCDC39-207ENST00000495817 PPP1R1AQ13522 171 aa2.77□□□□□ -1.97
CCDC39-207ENST00000495817 OR2F1Q13607 317 aa2.77□□□□□ -1.97
CCDC39-207ENST00000495817 SPATA31B1PQ5VZV4 182 aa2.77□□□□□ -1.97
CCDC39-207ENST00000495817 NOXRED1Q6NXP6 359 aa2.77□□□□□ -1.97
CCDC39-207ENST00000495817 SMARCD3Q6STE5 483 aa2.77□□□□□ -1.97
CCDC39-207ENST00000495817 C5orf46Q6UWT4 87 aa2.77□□□□□ -1.97
CCDC39-207ENST00000495817 SLC36A1Q7Z2H8 476 aa2.77□□□□□ -1.97
CCDC39-207ENST00000495817 SMIM20Q8N5G0 67 aa2.77□□□□□ -1.97
CCDC39-207ENST00000495817 OR10P1Q8NGE3 313 aa2.77□□□□□ -1.97
CCDC39-207ENST00000495817 OR13D1Q8NGV5 346 aa2.77□□□□□ -1.97
CCDC39-207ENST00000495817 TCEAL4Q96EI5 215 aa2.77□□□□□ -1.97
CCDC39-207ENST00000495817 OR7D2Q96RA2 312 aa2.77□□□□□ -1.97
CCDC39-207ENST00000495817 TSC22D3Q99576 134 aa2.77□□□□□ -1.97
CCDC39-207ENST00000495817 GNB1LQ9BYB4 327 aa2.77□□□□□ -1.97
CCDC39-207ENST00000495817 EIF5A2Q9GZV4 153 aaKnown RBP2.77□□□□□ -1.97
CCDC39-207ENST00000495817 OR51I1Q9H343 314 aa2.77□□□□□ -1.97
CCDC39-207ENST00000495817 GSKIPQ9P0R6 139 aa2.77□□□□□ -1.97
CCDC39-207ENST00000495817 FBXO5Q9UKT4 447 aa2.77□□□□□ -1.97
CCDC39-207ENST00000495817 TMEM56-RWDD3S4R434 201 aa2.77□□□□□ -1.97
CCDC39-207ENST00000495817 XIRP2A4UGR9 3374 aa2.77□□□□□ -1.97
CCDC39-207ENST00000495817 ALPK3Q96L96 1907 aa2.77□□□□□ -1.97
CCDC39-207ENST00000495817 COL1A1P02452 1464 aaPredicted RBP2.77□□□□□ -1.97
CCDC39-207ENST00000495817 ARAP2Q8WZ64 1704 aa2.76□□□□□ -1.97
CCDC39-207ENST00000495817 MED23Q9ULK4 1368 aa2.76□□□□□ -1.97
CCDC39-207ENST00000495817 CUL9Q8IWT3 2517 aa2.76□□□□□ -1.97
CCDC39-207ENST00000495817 A0A1B0GV90 55 aa2.76□□□□□ -1.97
CCDC39-207ENST00000495817 OR6C6A6NF89 314 aa2.76□□□□□ -1.97
CCDC39-207ENST00000495817 RFPL4AA6NLU0 287 aa2.76□□□□□ -1.97
CCDC39-207ENST00000495817 A8MWP6 167 aa2.76□□□□□ -1.97
CCDC39-207ENST00000495817 E7EQL1 145 aa2.76□□□□□ -1.97
CCDC39-207ENST00000495817 RFPL4AL1F8VTS6 287 aa2.76□□□□□ -1.97
CCDC39-207ENST00000495817 COPEO14579 308 aa2.76□□□□□ -1.97
CCDC39-207ENST00000495817 DCTN3O75935 186 aa2.76□□□□□ -1.97
CCDC39-207ENST00000495817 SLCO1A2P46721 670 aa2.76□□□□□ -1.97
CCDC39-207ENST00000495817 GABRA4P48169 554 aa2.76□□□□□ -1.97
CCDC39-207ENST00000495817 SULT1A1P50225 295 aa2.76□□□□□ -1.97
CCDC39-207ENST00000495817 SMAGPQ0VAQ4 97 aa2.76□□□□□ -1.97
CCDC39-207ENST00000495817 LRRC75BQ2VPJ9 315 aa2.76□□□□□ -1.97
CCDC39-207ENST00000495817 LRRC18Q8N456 261 aa2.76□□□□□ -1.97
CCDC39-207ENST00000495817 RNASE11Q8TAA1 199 aaKnown RBP2.76□□□□□ -1.97
CCDC39-207ENST00000495817 CYGBQ8WWM9 190 aa2.76□□□□□ -1.97
CCDC39-207ENST00000495817 ACY3Q96HD9 319 aa2.76□□□□□ -1.97
CCDC39-207ENST00000495817 SFRP2Q96HF1 295 aa2.76□□□□□ -1.97
CCDC39-207ENST00000495817 MS4A6AQ9H2W1 248 aa2.76□□□□□ -1.97
CCDC39-207ENST00000495817 ARMC1Q9NVT9 282 aa2.76□□□□□ -1.97
CCDC39-207ENST00000495817 FAM206AQ9NX38 181 aa2.76□□□□□ -1.97
CCDC39-207ENST00000495817 CARHSP1Q9Y2V2 147 aaKnown RBP2.76□□□□□ -1.97
CCDC39-207ENST00000495817 MRPS16Q9Y3D3 137 aaKnown RBP2.76□□□□□ -1.97
CCDC39-207ENST00000495817 ATP6V1G2-DDX39BF2Z307 99 aa2.75□□□□□ -1.97
CCDC39-207ENST00000495817 TSTD3H0UI37 97 aa2.75□□□□□ -1.97
CCDC39-207ENST00000495817 M0QZK8 103 aa2.75□□□□□ -1.97
CCDC39-207ENST00000495817 CHP2O43745 196 aa2.75□□□□□ -1.97
CCDC39-207ENST00000495817 CRYBA1P05813 215 aa2.75□□□□□ -1.97
CCDC39-207ENST00000495817 OR13C7P0DN81 318 aa2.75□□□□□ -1.97
CCDC39-207ENST00000495817 SCGB1A1P11684 91 aa2.75□□□□□ -1.97
CCDC39-207ENST00000495817 CYBAP13498 195 aa2.75□□□□□ -1.97
CCDC39-207ENST00000495817 GZMHP20718 246 aa2.75□□□□□ -1.97
CCDC39-207ENST00000495817 CDK2P24941 298 aa2.75□□□□□ -1.97
CCDC39-207ENST00000495817 MIPP30301 263 aa2.75□□□□□ -1.97
CCDC39-207ENST00000495817 OR1E2P47887 323 aa2.75□□□□□ -1.97
CCDC39-207ENST00000495817 SNAP25P60880 206 aa2.75□□□□□ -1.97
CCDC39-207ENST00000495817 MEF2BQ02080 365 aaPredicted RBP2.75□□□□□ -1.97
CCDC39-207ENST00000495817 ARHGAP11BQ3KRB8 267 aa2.75□□□□□ -1.97
CCDC39-207ENST00000495817 COMMD7Q86VX2 200 aa2.75□□□□□ -1.97
CCDC39-207ENST00000495817 LRRC25Q8N386 305 aaPredicted RBP2.75□□□□□ -1.97
CCDC39-207ENST00000495817 ZNF676Q8N7Q3 588 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms