RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 ZCCHC24Q8N2G6 241 aaKnown RBP6.98□□□□□ -1.29
EPHA4-213ENST00000495693 KIR3DL3Q8N743 410 aa6.98□□□□□ -1.29
EPHA4-213ENST00000495693 CYB561D1Q8N8Q1 229 aa6.98□□□□□ -1.29
EPHA4-213ENST00000495693 OR1L6Q8NGR2 347 aa6.98□□□□□ -1.29
EPHA4-213ENST00000495693 RPEQ96AT9 228 aa6.98□□□□□ -1.29
EPHA4-213ENST00000495693 MALSU1Q96EH3 234 aa6.98□□□□□ -1.29
EPHA4-213ENST00000495693 GGTLC1Q9BX51 225 aa6.98□□□□□ -1.29
EPHA4-213ENST00000495693 MRPL32Q9BYC8 188 aaKnown RBP6.98□□□□□ -1.29
EPHA4-213ENST00000495693 SLC25A22Q9H936 323 aa6.98□□□□□ -1.29
EPHA4-213ENST00000495693 BIN3Q9NQY0 253 aa6.98□□□□□ -1.29
EPHA4-213ENST00000495693 NDUFA4L2Q9NRX3 87 aa6.98□□□□□ -1.29
EPHA4-213ENST00000495693 TMEM167BQ9NRX6 74 aa6.98□□□□□ -1.29
EPHA4-213ENST00000495693 DCAF16Q9NXF7 216 aa6.98□□□□□ -1.29
EPHA4-213ENST00000495693 LSM4Q9Y4Z0 139 aaKnown RBP6.98□□□□□ -1.29
EPHA4-213ENST00000495693 INSIG2Q9Y5U4 225 aa6.98□□□□□ -1.29
EPHA4-213ENST00000495693 PXMP4Q9Y6I8 212 aa6.98□□□□□ -1.29
EPHA4-213ENST00000495693 CFAP54Q96N23 3096 aa6.98□□□□□ -1.29
EPHA4-213ENST00000495693 KIAA2026Q5HYC2 2103 aa6.98□□□□□ -1.29
EPHA4-213ENST00000495693 CUL9Q8IWT3 2517 aa6.97□□□□□ -1.29
EPHA4-213ENST00000495693 TEX50A0A1B0GTY4 177 aa6.97□□□□□ -1.29
EPHA4-213ENST00000495693 CLDN34H7C241 214 aa6.97□□□□□ -1.29
EPHA4-213ENST00000495693 RRHO14718 337 aa6.97□□□□□ -1.29
EPHA4-213ENST00000495693 PPP1R2P9O14990 202 aa6.97□□□□□ -1.29
EPHA4-213ENST00000495693 OR2C1O95371 312 aa6.97□□□□□ -1.29
EPHA4-213ENST00000495693 CA2P00918 260 aa6.97□□□□□ -1.29
EPHA4-213ENST00000495693 OPN1MWP04001 364 aa6.97□□□□□ -1.29
EPHA4-213ENST00000495693 IGKV1-16P04430 117 aa6.97□□□□□ -1.29
EPHA4-213ENST00000495693 STAG3L2P0CL84 134 aa6.97□□□□□ -1.29
EPHA4-213ENST00000495693 STAG3L3P0CL85 134 aa6.97□□□□□ -1.29
EPHA4-213ENST00000495693 OPN1MW2P0DN77 364 aa6.97□□□□□ -1.29
EPHA4-213ENST00000495693 OPN1MW3P0DN78 364 aa6.97□□□□□ -1.29
EPHA4-213ENST00000495693 S100PP25815 95 aa6.97□□□□□ -1.29
EPHA4-213ENST00000495693 GPR6P46095 362 aaPredicted RBP6.97□□□□□ -1.29
EPHA4-213ENST00000495693 BPIFB3P59826 476 aa6.97□□□□□ -1.29
EPHA4-213ENST00000495693 PAX2Q02962 417 aa6.97□□□□□ -1.29
EPHA4-213ENST00000495693 CD69Q07108 199 aa6.97□□□□□ -1.29
EPHA4-213ENST00000495693 TFF3Q07654 80 aa6.97□□□□□ -1.29
EPHA4-213ENST00000495693 ZNF726P1Q15940 193 aa6.97□□□□□ -1.29
EPHA4-213ENST00000495693 AKIRIN2Q53H80 203 aa6.97□□□□□ -1.29
EPHA4-213ENST00000495693 SPINK9Q5DT21 86 aa6.97□□□□□ -1.29
EPHA4-213ENST00000495693 WDR25Q64LD2 544 aaPredicted RBP6.97□□□□□ -1.29
EPHA4-213ENST00000495693 C11orf71Q6IPW1 123 aa6.97□□□□□ -1.29
EPHA4-213ENST00000495693 LYPD2Q6UXB3 125 aa6.97□□□□□ -1.29
EPHA4-213ENST00000495693 PQLC2Q6ZP29 291 aa6.97□□□□□ -1.29
EPHA4-213ENST00000495693 S100A7AQ86SG5 101 aa6.97□□□□□ -1.29
EPHA4-213ENST00000495693 ZNF114Q8NC26 417 aa6.97□□□□□ -1.29
EPHA4-213ENST00000495693 OR1L4Q8NGR5 311 aa6.97□□□□□ -1.29
EPHA4-213ENST00000495693 UHRF2Q96PU4 802 aa6.97□□□□□ -1.29
EPHA4-213ENST00000495693 PFDN5Q99471 154 aa6.97□□□□□ -1.29
EPHA4-213ENST00000495693 HINT2Q9BX68 163 aa6.97□□□□□ -1.29
EPHA4-213ENST00000495693 VSIRQ9H7M9 311 aa6.97□□□□□ -1.29
EPHA4-213ENST00000495693 SLC45A2Q9UMX9 530 aa6.97□□□□□ -1.29
EPHA4-213ENST00000495693 DSCAML1Q8TD84 2053 aa6.97□□□□□ -1.29
EPHA4-213ENST00000495693 MUC6Q6W4X9 2439 aa6.96□□□□□ -1.3
EPHA4-213ENST00000495693 TRAV3A0A0B4J244 114 aa6.96□□□□□ -1.3
EPHA4-213ENST00000495693 MED19A0JLT2 244 aaPredicted RBP6.96□□□□□ -1.3
EPHA4-213ENST00000495693 COLCA2A8K830 154 aa6.96□□□□□ -1.3
EPHA4-213ENST00000495693 BUB1B-PAK6H3BSN5 160 aa6.96□□□□□ -1.3
EPHA4-213ENST00000495693 SCGB2A1O75556 95 aa6.96□□□□□ -1.3
EPHA4-213ENST00000495693 IGLV1-47P01700 117 aa6.96□□□□□ -1.3
EPHA4-213ENST00000495693 S100A6P06703 90 aa6.96□□□□□ -1.3
EPHA4-213ENST00000495693 FABP1P07148 127 aa6.96□□□□□ -1.3
EPHA4-213ENST00000495693 CTRB1P17538 263 aa6.96□□□□□ -1.3
EPHA4-213ENST00000495693 CEBPGP53567 150 aa6.96□□□□□ -1.3
EPHA4-213ENST00000495693 FGF8P55075 233 aaPredicted RBP6.96□□□□□ -1.3
EPHA4-213ENST00000495693 LINC00205P59089 165 aa6.96□□□□□ -1.3
EPHA4-213ENST00000495693 RPL19P84098 196 aaKnown RBP6.96□□□□□ -1.3
EPHA4-213ENST00000495693 TMEM241Q24JQ0 296 aa6.96□□□□□ -1.3
EPHA4-213ENST00000495693 FAM90A2PQ658T7 463 aa6.96□□□□□ -1.3
EPHA4-213ENST00000495693 CTRB2Q6GPI1 263 aa6.96□□□□□ -1.3
EPHA4-213ENST00000495693 ZNF841Q6ZN19 808 aa6.96□□□□□ -1.3
EPHA4-213ENST00000495693 IQCF2Q8IXL9 164 aa6.96□□□□□ -1.3
EPHA4-213ENST00000495693 STPG3Q8N7X2 389 aa6.96□□□□□ -1.3
EPHA4-213ENST00000495693 LY6G5BQ8NDX9 201 aa6.96□□□□□ -1.3
EPHA4-213ENST00000495693 STXBP6Q8NFX7 210 aa6.96□□□□□ -1.3
EPHA4-213ENST00000495693 OR4P4Q8NGL7 312 aa6.96□□□□□ -1.3
EPHA4-213ENST00000495693 GATAD1Q8WUU5 269 aa6.96□□□□□ -1.3
EPHA4-213ENST00000495693 RPUSD4Q96CM3 377 aaKnown RBP6.96□□□□□ -1.3
EPHA4-213ENST00000495693 AJUBAQ96IF1 538 aa6.96□□□□□ -1.3
EPHA4-213ENST00000495693 MGST2Q99735 147 aa6.96□□□□□ -1.3
EPHA4-213ENST00000495693 SMIM7Q9BQ49 75 aa6.96□□□□□ -1.3
EPHA4-213ENST00000495693 TCEAL7Q9BRU2 100 aa6.96□□□□□ -1.3
EPHA4-213ENST00000495693 SSBP3Q9BWW4 388 aaPredicted RBP6.96□□□□□ -1.3
EPHA4-213ENST00000495693 PATZ1Q9HBE1 687 aaKnown RBP6.96□□□□□ -1.3
EPHA4-213ENST00000495693 DSCAMO60469 2012 aa6.95□□□□□ -1.3
EPHA4-213ENST00000495693 SVILO95425 2214 aa6.95□□□□□ -1.3
EPHA4-213ENST00000495693 C11orf94C9JXX5 98 aa6.95□□□□□ -1.3
EPHA4-213ENST00000495693 ENSAO43768 121 aaKnown RBP6.95□□□□□ -1.3
EPHA4-213ENST00000495693 PLAUP00749 431 aa6.95□□□□□ -1.3
EPHA4-213ENST00000495693 IGKV1D-33P01593 117 aa6.95□□□□□ -1.3
EPHA4-213ENST00000495693 IGKV1-33P01594 117 aa6.95□□□□□ -1.3
EPHA4-213ENST00000495693 RNASE2P10153 161 aaKnown RBP6.95□□□□□ -1.3
EPHA4-213ENST00000495693 CD99P14209 185 aa6.95□□□□□ -1.3
EPHA4-213ENST00000495693 RAB5AP20339 215 aa6.95□□□□□ -1.3
EPHA4-213ENST00000495693 COL8A2P25067 703 aa6.95□□□□□ -1.3
EPHA4-213ENST00000495693 HTR1DP28221 377 aa6.95□□□□□ -1.3
EPHA4-213ENST00000495693 RPL27AP46776 148 aaKnown RBP6.95□□□□□ -1.3
EPHA4-213ENST00000495693 MINOS1Q5TGZ0 78 aa6.95□□□□□ -1.3
EPHA4-213ENST00000495693 SLC16A13Q7RTY0 426 aa6.95□□□□□ -1.3
EPHA4-213ENST00000495693 NUDT10Q8NFP7 164 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms