RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 TBC1D24Q9ULP9 559 aa10.44□□□□□ -0.74
COL1A1-208ENST00000494334 ANKRD34BA5PLL1 514 aa10.43□□□□□ -0.74
COL1A1-208ENST00000494334 UPK1BO75841 260 aa10.43□□□□□ -0.74
COL1A1-208ENST00000494334 IFNA17P01571 189 aa10.43□□□□□ -0.74
COL1A1-208ENST00000494334 TRBV12-3P01733 135 aa10.43□□□□□ -0.74
COL1A1-208ENST00000494334 ANXA7P20073 488 aaKnown RBP10.43□□□□□ -0.74
COL1A1-208ENST00000494334 MECP2P51608 486 aaKnown RBP10.43□□□□□ -0.74
COL1A1-208ENST00000494334 SLURP1P55000 103 aa10.43□□□□□ -0.74
COL1A1-208ENST00000494334 MFAP2P55001 183 aa10.43□□□□□ -0.74
COL1A1-208ENST00000494334 UBE2MP61081 183 aaKnown RBP10.43□□□□□ -0.74
COL1A1-208ENST00000494334 IFITM3Q01628 133 aa10.43□□□□□ -0.74
COL1A1-208ENST00000494334 AARDQ4LEZ3 155 aa10.43□□□□□ -0.74
COL1A1-208ENST00000494334 C1QL4Q86Z23 238 aa10.43□□□□□ -0.74
COL1A1-208ENST00000494334 OR2C3Q8N628 320 aa10.43□□□□□ -0.74
COL1A1-208ENST00000494334 LRTM2Q8N967 370 aa10.43□□□□□ -0.74
COL1A1-208ENST00000494334 RCC1LQ96I51 464 aaKnown RBP10.43□□□□□ -0.74
COL1A1-208ENST00000494334 PDCD10Q9BUL8 212 aa10.43□□□□□ -0.74
COL1A1-208ENST00000494334 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.43□□□□□ -0.74
COL1A1-208ENST00000494334 PEF1Q9UBV8 284 aaKnown RBP10.43□□□□□ -0.74
COL1A1-208ENST00000494334 CACNG5Q9UF02 275 aa10.43□□□□□ -0.74
COL1A1-208ENST00000494334 F11RQ9Y624 299 aaKnown RBP10.43□□□□□ -0.74
COL1A1-208ENST00000494334 C9orf170A2RU37 121 aa10.42□□□□□ -0.74
COL1A1-208ENST00000494334 INS-IGF2F8WCM5 200 aa10.42□□□□□ -0.74
COL1A1-208ENST00000494334 DUS4LO95620 317 aaKnown RBP10.42□□□□□ -0.74
COL1A1-208ENST00000494334 TCRBP04435 133 aa10.42□□□□□ -0.74
COL1A1-208ENST00000494334 OR4E1P0C645 316 aa10.42□□□□□ -0.74
COL1A1-208ENST00000494334 EXOSC2Q13868 293 aaKnown RBP10.42□□□□□ -0.74
COL1A1-208ENST00000494334 NMSQ5H8A3 153 aa10.42□□□□□ -0.74
COL1A1-208ENST00000494334 SLC25A24Q6NUK1 477 aa10.42□□□□□ -0.74
COL1A1-208ENST00000494334 OR52E5Q8NH55 327 aa10.42□□□□□ -0.74
COL1A1-208ENST00000494334 DCUN1D4Q92564 292 aa10.42□□□□□ -0.74
COL1A1-208ENST00000494334 DLX4Q92988 240 aaPredicted RBP10.42□□□□□ -0.74
COL1A1-208ENST00000494334 PLEKHA3Q9HB20 300 aa10.42□□□□□ -0.74
COL1A1-208ENST00000494334 PKD1L1Q8TDX9 2849 aa10.42□□□□□ -0.74
COL1A1-208ENST00000494334 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.41□□□□□ -0.74
COL1A1-208ENST00000494334 DUXBA0A1W2PPF3 345 aa10.41□□□□□ -0.74
COL1A1-208ENST00000494334 MFSD2BA6NFX1 497 aa10.41□□□□□ -0.74
COL1A1-208ENST00000494334 IGHV3-23P01764 117 aa10.41□□□□□ -0.74
COL1A1-208ENST00000494334 HLA-AP01891 365 aaKnown RBP10.41□□□□□ -0.74
COL1A1-208ENST00000494334 SULT1A3P0DMM9 295 aa10.41□□□□□ -0.74
COL1A1-208ENST00000494334 SULT1A4P0DMN0 295 aa10.41□□□□□ -0.74
COL1A1-208ENST00000494334 HOXD3P31249 432 aaPredicted RBP10.41□□□□□ -0.74
COL1A1-208ENST00000494334 ERHP84090 104 aaKnown RBP10.41□□□□□ -0.74
COL1A1-208ENST00000494334 DHRS2Q13268 280 aa10.41□□□□□ -0.74
COL1A1-208ENST00000494334 ASAH1Q13510 395 aa10.41□□□□□ -0.74
COL1A1-208ENST00000494334 OR1L6Q8NGR2 347 aa10.41□□□□□ -0.74
COL1A1-208ENST00000494334 OR1P1Q8NH06 330 aa10.41□□□□□ -0.74
COL1A1-208ENST00000494334 MCRIP2Q9BUT9 160 aaKnown RBP10.41□□□□□ -0.74
COL1A1-208ENST00000494334 C20orf85Q9H1P6 137 aa10.41□□□□□ -0.74
COL1A1-208ENST00000494334 THYN1Q9P016 225 aa10.41□□□□□ -0.74
COL1A1-208ENST00000494334 S4R3C0 116 aa10.41□□□□□ -0.74
COL1A1-208ENST00000494334 NOTCH3Q9UM47 2321 aa10.41□□□□□ -0.74
COL1A1-208ENST00000494334 PIGBOS1A0A0B4J2F0 54 aa10.4□□□□□ -0.74
COL1A1-208ENST00000494334 FAM240BA0A1B0GVZ2 78 aa10.4□□□□□ -0.74
COL1A1-208ENST00000494334 CYB5BO43169 146 aa10.4□□□□□ -0.74
COL1A1-208ENST00000494334 ZP3P21754 424 aa10.4□□□□□ -0.74
COL1A1-208ENST00000494334 SPCS3P61009 180 aa10.4□□□□□ -0.74
COL1A1-208ENST00000494334 SMCO1Q147U7 214 aa10.4□□□□□ -0.74
COL1A1-208ENST00000494334 BEAN1Q3B7T3 259 aa10.4□□□□□ -0.74
COL1A1-208ENST00000494334 C4orf46Q504U0 113 aa10.4□□□□□ -0.74
COL1A1-208ENST00000494334 PDLIM3Q53GG5 364 aaPredicted RBP10.4□□□□□ -0.74
COL1A1-208ENST00000494334 MZT2BQ6NZ67 158 aa10.4□□□□□ -0.74
COL1A1-208ENST00000494334 LYG2Q86SG7 212 aa10.4□□□□□ -0.74
COL1A1-208ENST00000494334 ZNF114Q8NC26 417 aa10.4□□□□□ -0.74
COL1A1-208ENST00000494334 EEF1AKMT3Q96AZ1 226 aa10.4□□□□□ -0.74
COL1A1-208ENST00000494334 CXorf58Q96LI9 332 aa10.4□□□□□ -0.74
COL1A1-208ENST00000494334 CCDC140Q96MF4 163 aa10.4□□□□□ -0.74
COL1A1-208ENST00000494334 TRAV6A0A075B6T7 132 aa10.39□□□□□ -0.75
COL1A1-208ENST00000494334 A0A1B0GU03 582 aa10.39□□□□□ -0.75
COL1A1-208ENST00000494334 BMPR1BO00238 502 aa10.39□□□□□ -0.75
COL1A1-208ENST00000494334 OVOL1O14753 267 aa10.39□□□□□ -0.75
COL1A1-208ENST00000494334 HOXB5P09067 269 aa10.39□□□□□ -0.75
COL1A1-208ENST00000494334 HOXA1P49639 335 aaPredicted RBP10.39□□□□□ -0.75
COL1A1-208ENST00000494334 KLF5Q13887 457 aaPredicted RBP10.39□□□□□ -0.75
COL1A1-208ENST00000494334 FAM209BQ5JX69 171 aa10.39□□□□□ -0.75
COL1A1-208ENST00000494334 KPRPQ5T749 579 aaPredicted RBP10.39□□□□□ -0.75
COL1A1-208ENST00000494334 CLEC19AQ6UXS0 136 aa10.39□□□□□ -0.75
COL1A1-208ENST00000494334 COQ8AQ8NI60 647 aa10.39□□□□□ -0.75
COL1A1-208ENST00000494334 ZNF502Q8TBZ5 544 aa10.39□□□□□ -0.75
COL1A1-208ENST00000494334 VN1R17PQ8TDU5 208 aa10.39□□□□□ -0.75
COL1A1-208ENST00000494334 ENY2Q9NPA8 101 aa10.39□□□□□ -0.75
COL1A1-208ENST00000494334 NUDT15Q9NV35 164 aa10.39□□□□□ -0.75
COL1A1-208ENST00000494334 TMED3Q9Y3Q3 217 aa10.39□□□□□ -0.75
COL1A1-208ENST00000494334 FBN3Q75N90 2809 aa10.39□□□□□ -0.75
COL1A1-208ENST00000494334 TRBV7-1A0A0A6YYK4 115 aa10.38□□□□□ -0.75
COL1A1-208ENST00000494334 IGHV3-21A0A0B4J1V1 117 aa10.38□□□□□ -0.75
COL1A1-208ENST00000494334 SEC14L6B5MCN3 397 aa10.38□□□□□ -0.75
COL1A1-208ENST00000494334 PPP5D1E7EU14 171 aa10.38□□□□□ -0.75
COL1A1-208ENST00000494334 K7EIM0 57 aa10.38□□□□□ -0.75
COL1A1-208ENST00000494334 PITX3O75364 302 aa10.38□□□□□ -0.75
COL1A1-208ENST00000494334 NXPH3O95157 252 aa10.38□□□□□ -0.75
COL1A1-208ENST00000494334 CLEC3BP05452 202 aa10.38□□□□□ -0.75
COL1A1-208ENST00000494334 SNCAP37840 140 aa10.38□□□□□ -0.75
COL1A1-208ENST00000494334 RPEL1Q2QD12 228 aa10.38□□□□□ -0.75
COL1A1-208ENST00000494334 GGNBP1Q5YKI7 109 aa10.38□□□□□ -0.75
COL1A1-208ENST00000494334 PVRIGQ6DKI7 326 aa10.38□□□□□ -0.75
COL1A1-208ENST00000494334 OR52B4Q8NGK2 314 aa10.38□□□□□ -0.75
COL1A1-208ENST00000494334 SCARB1Q8WTV0 552 aa10.38□□□□□ -0.75
COL1A1-208ENST00000494334 CACFD1Q9UGQ2 172 aa10.38□□□□□ -0.75
COL1A1-208ENST00000494334 CEBPZOSA8MTT3 80 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms