RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 TBPL1P62380 186 aa2.72□□□□□ -1.97
VPS13A-212ENST00000493341 PYCR3Q53H96 274 aa2.72□□□□□ -1.97
VPS13A-212ENST00000493341 TNFAIP8L3Q5GJ75 292 aa2.72□□□□□ -1.97
VPS13A-212ENST00000493341 NOXRED1Q6NXP6 359 aa2.72□□□□□ -1.97
VPS13A-212ENST00000493341 RASL11AQ6T310 242 aa2.72□□□□□ -1.97
VPS13A-212ENST00000493341 H1FOOQ8IZA3 346 aaPredicted RBP2.72□□□□□ -1.97
VPS13A-212ENST00000493341 RNF182Q8N6D2 247 aa2.72□□□□□ -1.97
VPS13A-212ENST00000493341 OR8B12Q8NGG6 310 aa2.72□□□□□ -1.97
VPS13A-212ENST00000493341 TMEM147Q9BVK8 224 aa2.72□□□□□ -1.97
VPS13A-212ENST00000493341 MRPL40Q9NQ50 206 aaKnown RBP2.72□□□□□ -1.97
VPS13A-212ENST00000493341 ARMC1Q9NVT9 282 aa2.72□□□□□ -1.97
VPS13A-212ENST00000493341 C10orf71Q711Q0 1435 aa2.72□□□□□ -1.97
VPS13A-212ENST00000493341 ZNF532Q9HCE3 1301 aa2.71□□□□□ -1.97
VPS13A-212ENST00000493341 NUP98P52948 1817 aa2.71□□□□□ -1.97
VPS13A-212ENST00000493341 GGTLC3B5MD39 225 aa2.71□□□□□ -1.98
VPS13A-212ENST00000493341 CRYZL1O95825 349 aa2.71□□□□□ -1.98
VPS13A-212ENST00000493341 IGHV3-30-3P0DP02 117 aa2.71□□□□□ -1.98
VPS13A-212ENST00000493341 DHRS2Q13268 280 aa2.71□□□□□ -1.98
VPS13A-212ENST00000493341 GRK1Q15835 563 aa2.71□□□□□ -1.98
VPS13A-212ENST00000493341 SDIM1Q6ZPB5 146 aa2.71□□□□□ -1.98
VPS13A-212ENST00000493341 SGMS2Q8NHU3 365 aa2.71□□□□□ -1.98
VPS13A-212ENST00000493341 HOPXQ9BPY8 73 aaPredicted RBP2.71□□□□□ -1.98
VPS13A-212ENST00000493341 RNASE7Q9H1E1 156 aaKnown RBP2.71□□□□□ -1.98
VPS13A-212ENST00000493341 DUSP21Q9H596 190 aa2.71□□□□□ -1.98
VPS13A-212ENST00000493341 C11orf1Q9H5F2 150 aa2.71□□□□□ -1.98
VPS13A-212ENST00000493341 ANKRD36CQ5JPF3 1778 aa2.71□□□□□ -1.98
VPS13A-212ENST00000493341 hADV38S2A0JD32 116 aa2.71□□□□□ -1.98
VPS13A-212ENST00000493341 C9JCJ5 164 aa2.71□□□□□ -1.98
VPS13A-212ENST00000493341 FOXA1P55317 472 aa2.71□□□□□ -1.98
VPS13A-212ENST00000493341 IL15RAQ13261 267 aa2.71□□□□□ -1.98
VPS13A-212ENST00000493341 ARHGAP11BQ3KRB8 267 aa2.71□□□□□ -1.98
VPS13A-212ENST00000493341 LYG2Q86SG7 212 aa2.71□□□□□ -1.98
VPS13A-212ENST00000493341 EIF4E3Q8N5X7 224 aaKnown RBP2.71□□□□□ -1.98
VPS13A-212ENST00000493341 OR52L1Q8NGH7 329 aa2.71□□□□□ -1.98
VPS13A-212ENST00000493341 FAM172AQ8WUF8 416 aa2.71□□□□□ -1.98
VPS13A-212ENST00000493341 ZNF2Q9BSG1 426 aaPredicted RBP2.71□□□□□ -1.98
VPS13A-212ENST00000493341 CYTL1Q9NRR1 136 aa2.71□□□□□ -1.98
VPS13A-212ENST00000493341 TAAR3PQ9P1P4 343 aa2.71□□□□□ -1.98
VPS13A-212ENST00000493341 FER1L6Q2WGJ9 1857 aa2.71□□□□□ -1.98
VPS13A-212ENST00000493341 CCDC88AQ3V6T2 1871 aa2.71□□□□□ -1.98
VPS13A-212ENST00000493341 ZNF638Q14966 1978 aaKnown RBP2.7□□□□□ -1.98
VPS13A-212ENST00000493341 OTOFQ9HC10 1997 aa2.7□□□□□ -1.98
VPS13A-212ENST00000493341 TRAV26-2A0A0B4J265 109 aa2.7□□□□□ -1.98
VPS13A-212ENST00000493341 A0A0J9YY10 115 aa2.7□□□□□ -1.98
VPS13A-212ENST00000493341 A0A1B0GX78 115 aa2.7□□□□□ -1.98
VPS13A-212ENST00000493341 OR11H12B2RN74 326 aa2.7□□□□□ -1.98
VPS13A-212ENST00000493341 C15orf65H3BRN8 121 aa2.7□□□□□ -1.98
VPS13A-212ENST00000493341 SLC17A3O00476 420 aa2.7□□□□□ -1.98
VPS13A-212ENST00000493341 PLA2G10O15496 165 aa2.7□□□□□ -1.98
VPS13A-212ENST00000493341 LY6HO94772 140 aa2.7□□□□□ -1.98
VPS13A-212ENST00000493341 OR4E1P0C645 316 aa2.7□□□□□ -1.98
VPS13A-212ENST00000493341 ZFAND6Q6FIF0 208 aa2.7□□□□□ -1.98
VPS13A-212ENST00000493341 SLC36A1Q7Z2H8 476 aa2.7□□□□□ -1.98
VPS13A-212ENST00000493341 OR11H2Q8NH07 326 aa2.7□□□□□ -1.98
VPS13A-212ENST00000493341 UPK3BQ9BT76 320 aa2.7□□□□□ -1.98
VPS13A-212ENST00000493341 COMMD5Q9GZQ3 224 aa2.7□□□□□ -1.98
VPS13A-212ENST00000493341 TRABDQ9H4I3 376 aa2.7□□□□□ -1.98
VPS13A-212ENST00000493341 PRTFDC1Q9NRG1 225 aa2.7□□□□□ -1.98
VPS13A-212ENST00000493341 LAMB2P55268 1798 aa2.7□□□□□ -1.98
VPS13A-212ENST00000493341 PXDNLA1KZ92 1463 aa2.7□□□□□ -1.98
VPS13A-212ENST00000493341 TNRC6CQ9HCJ0 1690 aaKnown RBP2.7□□□□□ -1.98
VPS13A-212ENST00000493341 HMCN1Q96RW7 5635 aa2.7□□□□□ -1.98
VPS13A-212ENST00000493341 LRCOL1A6NCL2 159 aa2.69□□□□□ -1.98
VPS13A-212ENST00000493341 IGKV3-11P04433 115 aa2.69□□□□□ -1.98
VPS13A-212ENST00000493341 CRHBPP24387 322 aa2.69□□□□□ -1.98
VPS13A-212ENST00000493341 RPS11P62280 158 aaKnown RBP eCLIP2.69□□□□□ -1.98
VPS13A-212ENST00000493341 ZNF664Q8N3J9 261 aa2.69□□□□□ -1.98
VPS13A-212ENST00000493341 OR13C8Q8NGS7 320 aa2.69□□□□□ -1.98
VPS13A-212ENST00000493341 FNDC9Q8TBE3 224 aa2.69□□□□□ -1.98
VPS13A-212ENST00000493341 MND1Q9BWT6 205 aa2.69□□□□□ -1.98
VPS13A-212ENST00000493341 UQCC1Q9NVA1 299 aa2.69□□□□□ -1.98
VPS13A-212ENST00000493341 ASF1BQ9NVP2 202 aa2.69□□□□□ -1.98
VPS13A-212ENST00000493341 TIAM2Q8IVF5 1701 aa2.69□□□□□ -1.98
VPS13A-212ENST00000493341 CACNA1SQ13698 1873 aa2.69□□□□□ -1.98
VPS13A-212ENST00000493341 RIC1Q4ADV7 1423 aa2.69□□□□□ -1.98
VPS13A-212ENST00000493341 ADAMTSL1Q8N6G6 1762 aa2.69□□□□□ -1.98
VPS13A-212ENST00000493341 PTPRJQ12913 1337 aa2.69□□□□□ -1.98
VPS13A-212ENST00000493341 NLRC5Q86WI3 1866 aa2.69□□□□□ -1.98
VPS13A-212ENST00000493341 TMEM269A0A1B0GVZ9 245 aa2.69□□□□□ -1.98
VPS13A-212ENST00000493341 SOD1P00441 154 aa2.69□□□□□ -1.98
VPS13A-212ENST00000493341 ZNF705DP0CH99 300 aaPredicted RBP2.69□□□□□ -1.98
VPS13A-212ENST00000493341 RAB14P61106 215 aa2.69□□□□□ -1.98
VPS13A-212ENST00000493341 KRTAP25-1Q3LHN0 102 aa2.69□□□□□ -1.98
VPS13A-212ENST00000493341 TRIQKQ629K1 86 aa2.69□□□□□ -1.98
VPS13A-212ENST00000493341 GLT8D1Q68CQ7 371 aa2.69□□□□□ -1.98
VPS13A-212ENST00000493341 SPATA12Q7Z6I5 190 aa2.69□□□□□ -1.98
VPS13A-212ENST00000493341 OOSP2Q86WS3 158 aa2.69□□□□□ -1.98
VPS13A-212ENST00000493341 TBC1D19Q8N5T2 526 aa2.69□□□□□ -1.98
VPS13A-212ENST00000493341 ROPN1LQ96C74 230 aa2.69□□□□□ -1.98
VPS13A-212ENST00000493341 ERMAPQ96PL5 475 aaPredicted RBP2.69□□□□□ -1.98
VPS13A-212ENST00000493341 NIPSNAP1Q9BPW8 284 aa2.69□□□□□ -1.98
VPS13A-212ENST00000493341 CENPHQ9H3R5 247 aa2.69□□□□□ -1.98
VPS13A-212ENST00000493341 RSL24D1Q9UHA3 163 aaKnown RBP2.69□□□□□ -1.98
VPS13A-212ENST00000493341 MCTS1Q9ULC4 181 aaKnown RBP2.69□□□□□ -1.98
VPS13A-212ENST00000493341 ATG2BQ96BY7 2078 aa2.68□□□□□ -1.98
VPS13A-212ENST00000493341 TRBV20OR9-2A0A075B6H5 130 aa2.68□□□□□ -1.98
VPS13A-212ENST00000493341 LOC102725191A0A1B0GVB3 256 aa2.68□□□□□ -1.98
VPS13A-212ENST00000493341 C19orf71A6NCJ1 209 aa2.68□□□□□ -1.98
VPS13A-212ENST00000493341 H0YJX3 145 aa2.68□□□□□ -1.98
VPS13A-212ENST00000493341 CCL3P10147 92 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms