RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 TBC1D26Q86UD7 250 aa12.55□□□□□ -0.4
PDLIM2-217ENST00000491330 UXS1Q8NBZ7 420 aa12.55□□□□□ -0.4
PDLIM2-217ENST00000491330 OR52B4Q8NGK2 314 aa12.55□□□□□ -0.4
PDLIM2-217ENST00000491330 MCFD2Q8NI22 146 aa12.55□□□□□ -0.4
PDLIM2-217ENST00000491330 BSCL2Q96G97 398 aaPredicted RBP12.55□□□□□ -0.4
PDLIM2-217ENST00000491330 CCDC140Q96MF4 163 aa12.55□□□□□ -0.4
PDLIM2-217ENST00000491330 PRRT1Q99946 306 aa12.55□□□□□ -0.4
PDLIM2-217ENST00000491330 TRAV3A0A0B4J244 114 aa12.54□□□□□ -0.4
PDLIM2-217ENST00000491330 PIGBOS1A0A0B4J2F0 54 aa12.54□□□□□ -0.4
PDLIM2-217ENST00000491330 A8MWP6 167 aa12.54□□□□□ -0.4
PDLIM2-217ENST00000491330 OR11H12B2RN74 326 aa12.54□□□□□ -0.4
PDLIM2-217ENST00000491330 M0QYG6 137 aa12.54□□□□□ -0.4
PDLIM2-217ENST00000491330 S100A5P33763 92 aa12.54□□□□□ -0.4
PDLIM2-217ENST00000491330 ERHP84090 104 aaKnown RBP12.54□□□□□ -0.4
PDLIM2-217ENST00000491330 HAGHQ16775 308 aa12.54□□□□□ -0.4
PDLIM2-217ENST00000491330 ZNF585BQ52M93 769 aa12.54□□□□□ -0.4
PDLIM2-217ENST00000491330 Q56UQ5 140 aa12.54□□□□□ -0.4
PDLIM2-217ENST00000491330 ZNF502Q8TBZ5 544 aa12.54□□□□□ -0.4
PDLIM2-217ENST00000491330 SCGB3A2Q96PL1 93 aa12.54□□□□□ -0.4
PDLIM2-217ENST00000491330 PLEKHA3Q9HB20 300 aa12.54□□□□□ -0.4
PDLIM2-217ENST00000491330 NDUFA4L2Q9NRX3 87 aa12.54□□□□□ -0.4
PDLIM2-217ENST00000491330 C21orf62Q9NYP8 219 aa12.54□□□□□ -0.4
PDLIM2-217ENST00000491330 F11RQ9Y624 299 aaKnown RBP12.54□□□□□ -0.4
PDLIM2-217ENST00000491330 A0A1B0GW64 132 aa12.53□□□□□ -0.4
PDLIM2-217ENST00000491330 IZUMO1RA6ND01 250 aa12.53□□□□□ -0.4
PDLIM2-217ENST00000491330 FABP12A6NFH5 140 aa12.53□□□□□ -0.4
PDLIM2-217ENST00000491330 MFSD2BA6NFX1 497 aa12.53□□□□□ -0.4
PDLIM2-217ENST00000491330 CCDC160A6NGH7 325 aa12.53□□□□□ -0.4
PDLIM2-217ENST00000491330 NUPL2O15504 423 aaKnown RBP12.53□□□□□ -0.4
PDLIM2-217ENST00000491330 TGOLN2O43493 480 aa12.53□□□□□ -0.4
PDLIM2-217ENST00000491330 SCGB2A1O75556 95 aa12.53□□□□□ -0.4
PDLIM2-217ENST00000491330 PIGPP57054 158 aa12.53□□□□□ -0.4
PDLIM2-217ENST00000491330 AP3S2P59780 193 aa12.53□□□□□ -0.4
PDLIM2-217ENST00000491330 RELQ04864 619 aaPredicted RBP12.53□□□□□ -0.4
PDLIM2-217ENST00000491330 C19orf35Q6ZS72 473 aa12.53□□□□□ -0.4
PDLIM2-217ENST00000491330 OR10W1Q8NGF6 305 aa12.53□□□□□ -0.4
PDLIM2-217ENST00000491330 SOSTQ9BQB4 213 aa12.53□□□□□ -0.4
PDLIM2-217ENST00000491330 ZC4H2Q9NQZ6 224 aa12.53□□□□□ -0.4
PDLIM2-217ENST00000491330 COPZ2Q9P299 210 aa12.53□□□□□ -0.4
PDLIM2-217ENST00000491330 C15orf61A6NNL5 157 aa12.52□□□□□ -0.41
PDLIM2-217ENST00000491330 CTSDP07339 412 aaPredicted RBP12.52□□□□□ -0.41
PDLIM2-217ENST00000491330 BMI1P35226 326 aa12.52□□□□□ -0.41
PDLIM2-217ENST00000491330 FAUP35544 74 aaKnown RBP12.52□□□□□ -0.41
PDLIM2-217ENST00000491330 SNCAP37840 140 aa12.52□□□□□ -0.41
PDLIM2-217ENST00000491330 SUB1P53999 127 aaKnown RBP eCLIP12.52□□□□□ -0.41
PDLIM2-217ENST00000491330 UBAC2Q8NBM4 344 aa12.52□□□□□ -0.41
PDLIM2-217ENST00000491330 OR1P1Q8NH06 330 aa12.52□□□□□ -0.41
PDLIM2-217ENST00000491330 RNASE11Q8TAA1 199 aaKnown RBP12.52□□□□□ -0.41
PDLIM2-217ENST00000491330 SRD5A3Q9H8P0 318 aa12.52□□□□□ -0.41
PDLIM2-217ENST00000491330 ENY2Q9NPA8 101 aa12.52□□□□□ -0.41
PDLIM2-217ENST00000491330 DAZ1Q9NQZ3 744 aaKnown RBP12.52□□□□□ -0.41
PDLIM2-217ENST00000491330 TMEM14BQ9NUH8 114 aa12.52□□□□□ -0.41
PDLIM2-217ENST00000491330 NDUFA13Q9P0J0 144 aa12.52□□□□□ -0.41
PDLIM2-217ENST00000491330 CACFD1Q9UGQ2 172 aa12.52□□□□□ -0.41
PDLIM2-217ENST00000491330 SCP2D1Q9UJQ7 156 aa12.52□□□□□ -0.41
PDLIM2-217ENST00000491330 C14orf166Q9Y224 244 aaKnown RBP12.52□□□□□ -0.41
PDLIM2-217ENST00000491330 NSG2Q9Y328 171 aa12.52□□□□□ -0.41
PDLIM2-217ENST00000491330 OR2T8A6NH00 312 aa12.51□□□□□ -0.41
PDLIM2-217ENST00000491330 CGB1A6NKQ9 187 aa12.51□□□□□ -0.41
PDLIM2-217ENST00000491330 ZNF785A8K8V0 405 aa12.51□□□□□ -0.41
PDLIM2-217ENST00000491330 NDUFA4O00483 81 aa12.51□□□□□ -0.41
PDLIM2-217ENST00000491330 TNFSF8P32971 234 aa12.51□□□□□ -0.41
PDLIM2-217ENST00000491330 AKR1C2P52895 323 aa12.51□□□□□ -0.41
PDLIM2-217ENST00000491330 WT1-ASQ06250 92 aa12.51□□□□□ -0.41
PDLIM2-217ENST00000491330 TRIM16LQ309B1 348 aa12.51□□□□□ -0.41
PDLIM2-217ENST00000491330 CASC10Q5T4H9 136 aa12.51□□□□□ -0.41
PDLIM2-217ENST00000491330 RRNAD1Q96FB5 475 aaKnown RBP12.51□□□□□ -0.41
PDLIM2-217ENST00000491330 WDR89Q96FK6 387 aaPredicted RBP12.51□□□□□ -0.41
PDLIM2-217ENST00000491330 SEC22AQ96IW7 307 aa12.51□□□□□ -0.41
PDLIM2-217ENST00000491330 THAP7Q9BT49 309 aaPredicted RBP12.51□□□□□ -0.41
PDLIM2-217ENST00000491330 C20orf24Q9BUV8 137 aa12.51□□□□□ -0.41
PDLIM2-217ENST00000491330 DMRT1Q9Y5R6 373 aa12.51□□□□□ -0.41
PDLIM2-217ENST00000491330 C3orf85A0A1B0GTC6 90 aa12.5□□□□□ -0.41
PDLIM2-217ENST00000491330 ANKRD20A5PA0PJZ0 165 aa12.5□□□□□ -0.41
PDLIM2-217ENST00000491330 TMEM213A2RRL7 107 aa12.5□□□□□ -0.41
PDLIM2-217ENST00000491330 MFAP4P55083 255 aa12.5□□□□□ -0.41
PDLIM2-217ENST00000491330 CMC4P56277 68 aaPredicted RBP12.5□□□□□ -0.41
PDLIM2-217ENST00000491330 HSPE1P61604 102 aaKnown RBP12.5□□□□□ -0.41
PDLIM2-217ENST00000491330 SCGB2B2Q4G0G5 96 aa12.5□□□□□ -0.41
PDLIM2-217ENST00000491330 RNASE12Q5GAN4 147 aaKnown RBP12.5□□□□□ -0.41
PDLIM2-217ENST00000491330 BTNL8Q6UX41 500 aa12.5□□□□□ -0.41
PDLIM2-217ENST00000491330 FAM219AQ8IW50 185 aa12.5□□□□□ -0.41
PDLIM2-217ENST00000491330 MISP3Q96FF7 219 aa12.5□□□□□ -0.41
PDLIM2-217ENST00000491330 TXN2Q99757 166 aa12.5□□□□□ -0.41
PDLIM2-217ENST00000491330 RBM38Q9H0Z9 239 aaKnown RBP12.5□□□□□ -0.41
PDLIM2-217ENST00000491330 C5orf66Q9H5L9 145 aa12.5□□□□□ -0.41
PDLIM2-217ENST00000491330 IGHV3-35A0A0C4DH35 117 aa12.49□□□□□ -0.41
PDLIM2-217ENST00000491330 YIF1AO95070 293 aa12.49□□□□□ -0.41
PDLIM2-217ENST00000491330 SCAF4O95104 1147 aaKnown RBP12.49□□□□□ -0.41
PDLIM2-217ENST00000491330 IFNA17P01571 189 aa12.49□□□□□ -0.41
PDLIM2-217ENST00000491330 CD7P09564 240 aa12.49□□□□□ -0.41
PDLIM2-217ENST00000491330 TM4SF20Q53R12 229 aa12.49□□□□□ -0.41
PDLIM2-217ENST00000491330 TMEM61Q8N0U2 210 aa12.49□□□□□ -0.41
PDLIM2-217ENST00000491330 OR2C3Q8N628 320 aa12.49□□□□□ -0.41
PDLIM2-217ENST00000491330 DEFB125Q8N687 156 aa12.49□□□□□ -0.41
PDLIM2-217ENST00000491330 SLC35G3Q8N808 338 aa12.49□□□□□ -0.41
PDLIM2-217ENST00000491330 OR13C8Q8NGS7 320 aa12.49□□□□□ -0.41
PDLIM2-217ENST00000491330 SCARB1Q8WTV0 552 aa12.49□□□□□ -0.41
PDLIM2-217ENST00000491330 MRGPRFQ96AM1 343 aa12.49□□□□□ -0.41
PDLIM2-217ENST00000491330 SPAG8Q99932 426 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 1831.1 ms