RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 ARL16Q0P5N6 197 aa6.03□□□□□ -1.44
NPHP3-208ENST00000490993 BPIFA4PQ86YQ2 179 aa6.03□□□□□ -1.44
NPHP3-208ENST00000490993 RPP25LQ8N5L8 163 aaKnown RBP6.03□□□□□ -1.44
NPHP3-208ENST00000490993 STAG3L2P0CL84 134 aa6.02□□□□□ -1.45
NPHP3-208ENST00000490993 STAG3L3P0CL85 134 aa6.02□□□□□ -1.45
NPHP3-208ENST00000490993 TMUB1Q9BVT8 246 aa6.02□□□□□ -1.45
NPHP3-208ENST00000490993 TMEM14BQ9NUH8 114 aa6.02□□□□□ -1.45
NPHP3-208ENST00000490993 K7EM74 188 aa6.02□□□□□ -1.45
NPHP3-208ENST00000490993 P01737 135 aa6.02□□□□□ -1.45
NPHP3-208ENST00000490993 TRGC2P03986 189 aa6.02□□□□□ -1.45
NPHP3-208ENST00000490993 TDGF1P3P51864 188 aa6.02□□□□□ -1.45
NPHP3-208ENST00000490993 PRR30Q53SZ7 412 aaPredicted RBP6.02□□□□□ -1.45
NPHP3-208ENST00000490993 WDR25Q64LD2 544 aaPredicted RBP6.02□□□□□ -1.45
NPHP3-208ENST00000490993 RBM14Q96PK6 669 aaKnown RBP6.02□□□□□ -1.45
NPHP3-208ENST00000490993 TRBV9A0A0B4J1U6 114 aa6.02□□□□□ -1.45
NPHP3-208ENST00000490993 NBR2O15453 112 aa6.02□□□□□ -1.45
NPHP3-208ENST00000490993 NHLH1Q02575 133 aa6.02□□□□□ -1.45
NPHP3-208ENST00000490993 POU2AF1Q16633 256 aa6.02□□□□□ -1.45
NPHP3-208ENST00000490993 PPP1R27Q86WC6 154 aa6.02□□□□□ -1.45
NPHP3-208ENST00000490993 COL25A1Q9BXS0 654 aaPredicted RBP6.02□□□□□ -1.45
NPHP3-208ENST00000490993 ARL2-SNX15V9GYD0 113 aa6.02□□□□□ -1.45
NPHP3-208ENST00000490993 TRAV3A0A0B4J244 114 aa6.02□□□□□ -1.45
NPHP3-208ENST00000490993 TCRBV4S1A1TA0A5B7 111 aa6.02□□□□□ -1.45
NPHP3-208ENST00000490993 TMEM8BA6NDV4 472 aa6.02□□□□□ -1.45
NPHP3-208ENST00000490993 COLCA2A8K830 154 aa6.02□□□□□ -1.45
NPHP3-208ENST00000490993 REG1AP05451 166 aa6.02□□□□□ -1.45
NPHP3-208ENST00000490993 APELAP0DMC3 54 aa6.02□□□□□ -1.45
NPHP3-208ENST00000490993 RAB9AP51151 201 aa6.02□□□□□ -1.45
NPHP3-208ENST00000490993 RPL23P62829 140 aaKnown RBP6.02□□□□□ -1.45
NPHP3-208ENST00000490993 IQCJQ1A5X6 159 aa6.02□□□□□ -1.45
NPHP3-208ENST00000490993 MGST2Q99735 147 aa6.02□□□□□ -1.45
NPHP3-208ENST00000490993 FBXL15Q9H469 300 aa6.02□□□□□ -1.45
NPHP3-208ENST00000490993 CRISP2P16562 243 aa6.01□□□□□ -1.45
NPHP3-208ENST00000490993 CR1LQ2VPA4 569 aa6.01□□□□□ -1.45
NPHP3-208ENST00000490993 IBA57Q5T440 356 aaKnown RBP6.01□□□□□ -1.45
NPHP3-208ENST00000490993 LINC00305Q7Z4B0 112 aa6.01□□□□□ -1.45
NPHP3-208ENST00000490993 EP300Q09472 2414 aaPredicted RBP6.01□□□□□ -1.45
NPHP3-208ENST00000490993 A0A1W2PRE2 83 aa6.01□□□□□ -1.45
NPHP3-208ENST00000490993 TOX4O94842 621 aa6.01□□□□□ -1.45
NPHP3-208ENST00000490993 CRYBB3P26998 211 aa6.01□□□□□ -1.45
NPHP3-208ENST00000490993 VDAC2P45880 294 aaPredicted RBP6.01□□□□□ -1.45
NPHP3-208ENST00000490993 PRSS8Q16651 343 aa6.01□□□□□ -1.45
NPHP3-208ENST00000490993 LYPD2Q6UXB3 125 aa6.01□□□□□ -1.45
NPHP3-208ENST00000490993 BEND2Q8NDZ0 799 aa6.01□□□□□ -1.45
NPHP3-208ENST00000490993 IMMP2LQ96T52 175 aa6.01□□□□□ -1.45
NPHP3-208ENST00000490993 SRSF8Q9BRL6 282 aaKnown RBP6.01□□□□□ -1.45
NPHP3-208ENST00000490993 TPPP3Q9BW30 176 aa6.01□□□□□ -1.45
NPHP3-208ENST00000490993 IGHV3-21A0A0B4J1V1 117 aa6.01□□□□□ -1.45
NPHP3-208ENST00000490993 ZNF98A6NK75 572 aa6.01□□□□□ -1.45
NPHP3-208ENST00000490993 IGKV1D-33P01593 117 aa6.01□□□□□ -1.45
NPHP3-208ENST00000490993 IGKV1-33P01594 117 aa6.01□□□□□ -1.45
NPHP3-208ENST00000490993 TAS2R60P59551 318 aa6.01□□□□□ -1.45
NPHP3-208ENST00000490993 PMS2P11Q13670 270 aa6.01□□□□□ -1.45
NPHP3-208ENST00000490993 MIR17HGQ75NE6 70 aa6.01□□□□□ -1.45
NPHP3-208ENST00000490993 C1QL4Q86Z23 238 aa6.01□□□□□ -1.45
NPHP3-208ENST00000490993 OR1P1Q8NH06 330 aa6.01□□□□□ -1.45
NPHP3-208ENST00000490993 CCL19Q99731 98 aa6.01□□□□□ -1.45
NPHP3-208ENST00000490993 SVILO95425 2214 aa6.01□□□□□ -1.45
NPHP3-208ENST00000490993 RTTNQ86VV8 2226 aa6.01□□□□□ -1.45
NPHP3-208ENST00000490993 IGHV1-3A0A0C4DH29 117 aa6.01□□□□□ -1.45
NPHP3-208ENST00000490993 EIF3GO75821 320 aaKnown RBP eCLIP6.01□□□□□ -1.45
NPHP3-208ENST00000490993 CDX1P47902 265 aaPredicted RBP6.01□□□□□ -1.45
NPHP3-208ENST00000490993 ATP5G3P48201 142 aa6.01□□□□□ -1.45
NPHP3-208ENST00000490993 PSG9Q00887 426 aa6.01□□□□□ -1.45
NPHP3-208ENST00000490993 HABP2Q14520 560 aaPredicted RBP6.01□□□□□ -1.45
NPHP3-208ENST00000490993 UNQ6494/PRO21346Q6UXR6 183 aa6.01□□□□□ -1.45
NPHP3-208ENST00000490993 CYYR1Q96J86 154 aa6.01□□□□□ -1.45
NPHP3-208ENST00000490993 PACRGQ96M98 296 aaPredicted RBP6.01□□□□□ -1.45
NPHP3-208ENST00000490993 PGPA6NDG6 321 aa6□□□□□ -1.45
NPHP3-208ENST00000490993 BUB1B-PAK6H3BSN5 160 aa6□□□□□ -1.45
NPHP3-208ENST00000490993 ISLRO14498 428 aa6□□□□□ -1.45
NPHP3-208ENST00000490993 EFNA4P52798 201 aa6□□□□□ -1.45
NPHP3-208ENST00000490993 MINOS1Q5TGZ0 78 aa6□□□□□ -1.45
NPHP3-208ENST00000490993 CENPVQ7Z7K6 275 aaPredicted RBP6□□□□□ -1.45
NPHP3-208ENST00000490993 OR5AN1Q8NGI8 311 aa6□□□□□ -1.45
NPHP3-208ENST00000490993 TXN2Q99757 166 aa6□□□□□ -1.45
NPHP3-208ENST00000490993 TIMM8BQ9Y5J9 83 aaPredicted RBP6□□□□□ -1.45
NPHP3-208ENST00000490993 MINOS1-NBL1R4GNA1 71 aa6□□□□□ -1.45
NPHP3-208ENST00000490993 KIAA1324LA8MWY0 1029 aaPredicted RBP6□□□□□ -1.45
NPHP3-208ENST00000490993 LYNX1G3V0Z9 82 aa6□□□□□ -1.45
NPHP3-208ENST00000490993 LYNX1P0DP58 116 aa6□□□□□ -1.45
NPHP3-208ENST00000490993 OR5I1Q13606 314 aa6□□□□□ -1.45
NPHP3-208ENST00000490993 LINC00518Q8N0U6 118 aa6□□□□□ -1.45
NPHP3-208ENST00000490993 OR8I2Q8N0Y5 310 aa6□□□□□ -1.45
NPHP3-208ENST00000490993 SRSF12Q8WXF0 261 aaKnown RBP6□□□□□ -1.45
NPHP3-208ENST00000490993 AURKAIP1Q9NWT8 199 aaPredicted RBP6□□□□□ -1.45
NPHP3-208ENST00000490993 NCOA6Q14686 2063 aaPredicted RBP6□□□□□ -1.45
NPHP3-208ENST00000490993 BMPR1BO00238 502 aa6□□□□□ -1.45
NPHP3-208ENST00000490993 COX6B1P14854 86 aa6□□□□□ -1.45
NPHP3-208ENST00000490993 ZNF134P52741 427 aa6□□□□□ -1.45
NPHP3-208ENST00000490993 LINC00205P59089 165 aa6□□□□□ -1.45
NPHP3-208ENST00000490993 ELOBQ15370 118 aa6□□□□□ -1.45
NPHP3-208ENST00000490993 TPTE2P1Q5T6R2 138 aa6□□□□□ -1.45
NPHP3-208ENST00000490993 C11orf1Q9H5F2 150 aa6□□□□□ -1.45
NPHP3-208ENST00000490993 RFNGQ9Y644 331 aa6□□□□□ -1.45
NPHP3-208ENST00000490993 A8MWL6 223 aa6□□□□□ -1.45
NPHP3-208ENST00000490993 SHISA9B4DS77 424 aa6□□□□□ -1.45
NPHP3-208ENST00000490993 COL8A2P25067 703 aa6□□□□□ -1.45
NPHP3-208ENST00000490993 COL8A1P27658 744 aa6□□□□□ -1.45
NPHP3-208ENST00000490993 GAMTQ14353 236 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms