RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 IGHV4-31P0DP07 118 aa9.41□□□□□ -0.9
TRIM40-208ENST00000489892 SAA4P35542 130 aa9.41□□□□□ -0.9
TRIM40-208ENST00000489892 UBE2KP61086 200 aa9.41□□□□□ -0.9
TRIM40-208ENST00000489892 RPP30P78346 268 aaKnown RBP9.41□□□□□ -0.9
TRIM40-208ENST00000489892 PMS2P11Q13670 270 aa9.41□□□□□ -0.9
TRIM40-208ENST00000489892 SOHLH1Q5JUK2 328 aa9.41□□□□□ -0.9
TRIM40-208ENST00000489892 OR4A47Q6IF82 309 aa9.41□□□□□ -0.9
TRIM40-208ENST00000489892 C1orf229Q6ZS94 237 aaPredicted RBP9.41□□□□□ -0.9
TRIM40-208ENST00000489892 ZNF429Q86V71 674 aa9.41□□□□□ -0.9
TRIM40-208ENST00000489892 TEX45Q8NA69 505 aa9.41□□□□□ -0.9
TRIM40-208ENST00000489892 OR2T10Q8NGZ9 312 aa9.41□□□□□ -0.9
TRIM40-208ENST00000489892 OR5B3Q8NH48 314 aa9.41□□□□□ -0.9
TRIM40-208ENST00000489892 RXFP4Q8TDU9 374 aa9.41□□□□□ -0.9
TRIM40-208ENST00000489892 P2RX4Q99571 388 aa9.41□□□□□ -0.9
TRIM40-208ENST00000489892 TCEAL7Q9BRU2 100 aa9.41□□□□□ -0.9
TRIM40-208ENST00000489892 RPS10P5Q9NQ39 176 aa9.41□□□□□ -0.9
TRIM40-208ENST00000489892 PSENENQ9NZ42 101 aa9.41□□□□□ -0.9
TRIM40-208ENST00000489892 HSPB7Q9UBY9 170 aa9.41□□□□□ -0.9
TRIM40-208ENST00000489892 FOXA2Q9Y261 457 aaPredicted RBP9.41□□□□□ -0.9
TRIM40-208ENST00000489892 ZNF257Q9Y2Q1 563 aa9.41□□□□□ -0.9
TRIM40-208ENST00000489892 TRAV40A0A0B4J280 105 aa9.4□□□□□ -0.9
TRIM40-208ENST00000489892 CENPVL3A0A0U1RRI6 287 aa9.4□□□□□ -0.9
TRIM40-208ENST00000489892 C7orf77A4D0Y5 90 aa9.4□□□□□ -0.9
TRIM40-208ENST00000489892 C15orf61A6NNL5 157 aa9.4□□□□□ -0.9
TRIM40-208ENST00000489892 TIMM23O14925 209 aa9.4□□□□□ -0.9
TRIM40-208ENST00000489892 TGOLN2O43493 480 aa9.4□□□□□ -0.9
TRIM40-208ENST00000489892 KBTBD11O94819 623 aa9.4□□□□□ -0.9
TRIM40-208ENST00000489892 PAX9P55771 341 aa9.4□□□□□ -0.9
TRIM40-208ENST00000489892 SPCS3P61009 180 aa9.4□□□□□ -0.9
TRIM40-208ENST00000489892 TNFRSF9Q07011 255 aa9.4□□□□□ -0.9
TRIM40-208ENST00000489892 PNRC1Q12796 327 aaPredicted RBP9.4□□□□□ -0.9
TRIM40-208ENST00000489892 SSX2Q16385 188 aa9.4□□□□□ -0.9
TRIM40-208ENST00000489892 CLEC9AQ6UXN8 241 aa9.4□□□□□ -0.9
TRIM40-208ENST00000489892 THNSL2Q86YJ6 484 aa9.4□□□□□ -0.9
TRIM40-208ENST00000489892 KRTAP1-3Q8IUG1 177 aa9.4□□□□□ -0.9
TRIM40-208ENST00000489892 LILRB2Q8N423 598 aa9.4□□□□□ -0.9
TRIM40-208ENST00000489892 MAGT1Q9H0U3 335 aa9.4□□□□□ -0.9
TRIM40-208ENST00000489892 ENY2Q9NPA8 101 aa9.4□□□□□ -0.9
TRIM40-208ENST00000489892 C1RLQ9NZP8 487 aa9.4□□□□□ -0.9
TRIM40-208ENST00000489892 HILPDAQ9Y5L2 63 aa9.4□□□□□ -0.9
TRIM40-208ENST00000489892 HIVEP2P31629 2446 aa9.4□□□□□ -0.91
TRIM40-208ENST00000489892 FN1P02751 2386 aaKnown RBP9.39□□□□□ -0.91
TRIM40-208ENST00000489892 A0A0G2JRQ6 117 aa9.39□□□□□ -0.91
TRIM40-208ENST00000489892 CXorf65A6NEN9 183 aa9.39□□□□□ -0.91
TRIM40-208ENST00000489892 C9JQL5 133 aa9.39□□□□□ -0.91
TRIM40-208ENST00000489892 M0R036 132 aa9.39□□□□□ -0.91
TRIM40-208ENST00000489892 ACTL6BO94805 426 aa9.39□□□□□ -0.91
TRIM40-208ENST00000489892 VENTXO95231 258 aa9.39□□□□□ -0.91
TRIM40-208ENST00000489892 IFNA17P01571 189 aa9.39□□□□□ -0.91
TRIM40-208ENST00000489892 MBP02144 154 aa9.39□□□□□ -0.91
TRIM40-208ENST00000489892 S100A8P05109 93 aa9.39□□□□□ -0.91
TRIM40-208ENST00000489892 FBP1P09467 338 aa9.39□□□□□ -0.91
TRIM40-208ENST00000489892 SAA1P0DJI8 122 aaPredicted RBP9.39□□□□□ -0.91
TRIM40-208ENST00000489892 DLX1P56177 255 aa9.39□□□□□ -0.91
TRIM40-208ENST00000489892 ATP5IP56385 69 aaPredicted RBP9.39□□□□□ -0.91
TRIM40-208ENST00000489892 LINC00205P59089 165 aa9.39□□□□□ -0.91
TRIM40-208ENST00000489892 RPL8P62917 257 aaKnown RBP9.39□□□□□ -0.91
TRIM40-208ENST00000489892 DIAPH2-AS1Q14236 149 aa9.39□□□□□ -0.91
TRIM40-208ENST00000489892 LRRC75BQ2VPJ9 315 aa9.39□□□□□ -0.91
TRIM40-208ENST00000489892 PDLIM3Q53GG5 364 aaPredicted RBP9.39□□□□□ -0.91
TRIM40-208ENST00000489892 SPSB3Q6PJ21 355 aa9.39□□□□□ -0.91
TRIM40-208ENST00000489892 SSX9Q7RTT3 188 aa9.39□□□□□ -0.91
TRIM40-208ENST00000489892 SLC35E3Q7Z769 313 aa9.39□□□□□ -0.91
TRIM40-208ENST00000489892 C1QL4Q86Z23 238 aa9.39□□□□□ -0.91
TRIM40-208ENST00000489892 MMD2Q8IY49 270 aa9.39□□□□□ -0.91
TRIM40-208ENST00000489892 LINC00518Q8N0U6 118 aa9.39□□□□□ -0.91
TRIM40-208ENST00000489892 NANPQ8TBE9 248 aa9.39□□□□□ -0.91
TRIM40-208ENST00000489892 TMEM167AQ8TBQ9 72 aa9.39□□□□□ -0.91
TRIM40-208ENST00000489892 MBD3L1Q8WWY6 194 aa9.39□□□□□ -0.91
TRIM40-208ENST00000489892 HIST1H2BAQ96A08 127 aa9.39□□□□□ -0.91
TRIM40-208ENST00000489892 SMR3AQ99954 134 aa9.39□□□□□ -0.91
TRIM40-208ENST00000489892 COMMD5Q9GZQ3 224 aa9.39□□□□□ -0.91
TRIM40-208ENST00000489892 SAV1Q9H4B6 383 aaPredicted RBP9.39□□□□□ -0.91
TRIM40-208ENST00000489892 CSPG4Q6UVK1 2322 aa9.39□□□□□ -0.91
TRIM40-208ENST00000489892 COL6A5A8TX70 2615 aa9.38□□□□□ -0.91
TRIM40-208ENST00000489892 ATRQ13535 2644 aa9.38□□□□□ -0.91
TRIM40-208ENST00000489892 LOC102723971A0A1B0GUV8 181 aa9.38□□□□□ -0.91
TRIM40-208ENST00000489892 UPK2O00526 184 aa9.38□□□□□ -0.91
TRIM40-208ENST00000489892 CST7O76096 145 aa9.38□□□□□ -0.91
TRIM40-208ENST00000489892 TMEM50AO95807 157 aa9.38□□□□□ -0.91
TRIM40-208ENST00000489892 CRYBA1P05813 215 aa9.38□□□□□ -0.91
TRIM40-208ENST00000489892 SNRNP70P08621 437 aaKnown RBP9.38□□□□□ -0.91
TRIM40-208ENST00000489892 SRP19P09132 144 aaKnown RBP9.38□□□□□ -0.91
TRIM40-208ENST00000489892 HSPE1P61604 102 aaKnown RBP9.38□□□□□ -0.91
TRIM40-208ENST00000489892 S100A12P80511 92 aa9.38□□□□□ -0.91
TRIM40-208ENST00000489892 RELBQ01201 579 aa9.38□□□□□ -0.91
TRIM40-208ENST00000489892 SCGB2A2Q13296 93 aa9.38□□□□□ -0.91
TRIM40-208ENST00000489892 HES1Q14469 280 aa9.38□□□□□ -0.91
TRIM40-208ENST00000489892 TMEM14EPQ6UXP3 125 aa9.38□□□□□ -0.91
TRIM40-208ENST00000489892 Q6ZRM9 215 aa9.38□□□□□ -0.91
TRIM40-208ENST00000489892 LHFPL4Q7Z7J7 247 aa9.38□□□□□ -0.91
TRIM40-208ENST00000489892 CENPVQ7Z7K6 275 aaPredicted RBP9.38□□□□□ -0.91
TRIM40-208ENST00000489892 OR1L8Q8NGR8 309 aa9.38□□□□□ -0.91
TRIM40-208ENST00000489892 CFHR4Q92496 578 aa9.38□□□□□ -0.91
TRIM40-208ENST00000489892 NIPSNAP3BQ9BS92 247 aa9.38□□□□□ -0.91
TRIM40-208ENST00000489892 TMEM14BQ9NUH8 114 aa9.38□□□□□ -0.91
TRIM40-208ENST00000489892 FBXO7Q9Y3I1 522 aa9.38□□□□□ -0.91
TRIM40-208ENST00000489892 A0A1W2PN81 502 aa9.37□□□□□ -0.91
TRIM40-208ENST00000489892 A0A1W2PRD5 423 aa9.37□□□□□ -0.91
TRIM40-208ENST00000489892 A0A1W2PRF3 423 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms