RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 IGHV7-81A0A0B4J1V7 117 aa11.22□□□□□ -0.61
VPS26A-205ENST00000489656 PRSS46E5RG02 174 aa11.22□□□□□ -0.61
VPS26A-205ENST00000489656 FLNBO75369 2602 aaKnown RBP11.22□□□□□ -0.61
VPS26A-205ENST00000489656 JTBO76095 146 aa11.22□□□□□ -0.61
VPS26A-205ENST00000489656 CNIH1O95406 144 aa11.22□□□□□ -0.61
VPS26A-205ENST00000489656 OR8U8P0C7N1 319 aa11.22□□□□□ -0.61
VPS26A-205ENST00000489656 RNASE2P10153 161 aaKnown RBP11.22□□□□□ -0.61
VPS26A-205ENST00000489656 HNF1AP20823 631 aa11.22□□□□□ -0.61
VPS26A-205ENST00000489656 GNB1P62873 340 aa11.22□□□□□ -0.61
VPS26A-205ENST00000489656 IFITM2Q01629 132 aa11.22□□□□□ -0.61
VPS26A-205ENST00000489656 ARL16Q0P5N6 197 aa11.22□□□□□ -0.61
VPS26A-205ENST00000489656 FXYD3Q14802 87 aa11.22□□□□□ -0.61
VPS26A-205ENST00000489656 ATP6V1FQ16864 119 aa11.22□□□□□ -0.61
VPS26A-205ENST00000489656 PVRIGQ6DKI7 326 aa11.22□□□□□ -0.61
VPS26A-205ENST00000489656 CLEC9AQ6UXN8 241 aa11.22□□□□□ -0.61
VPS26A-205ENST00000489656 UBAC2Q8NBM4 344 aa11.22□□□□□ -0.61
VPS26A-205ENST00000489656 ARPC1AQ92747 370 aa11.22□□□□□ -0.61
VPS26A-205ENST00000489656 PINX1Q96BK5 328 aaKnown RBP11.22□□□□□ -0.61
VPS26A-205ENST00000489656 ZNF48Q96MX3 618 aaPredicted RBP11.22□□□□□ -0.61
VPS26A-205ENST00000489656 ZNF471Q9BX82 626 aaPredicted RBP11.22□□□□□ -0.61
VPS26A-205ENST00000489656 YAE1D1Q9NRH1 226 aa11.22□□□□□ -0.61
VPS26A-205ENST00000489656 DFFBO76075 338 aa11.21□□□□□ -0.61
VPS26A-205ENST00000489656 AMY1AP04745 511 aa11.21□□□□□ -0.61
VPS26A-205ENST00000489656 OR13C7P0DN81 318 aa11.21□□□□□ -0.61
VPS26A-205ENST00000489656 SNCAP37840 140 aa11.21□□□□□ -0.61
VPS26A-205ENST00000489656 SUB1P53999 127 aaKnown RBP eCLIP11.21□□□□□ -0.61
VPS26A-205ENST00000489656 EIF5AP63241 154 aaKnown RBP11.21□□□□□ -0.61
VPS26A-205ENST00000489656 CX3CL1P78423 397 aa11.21□□□□□ -0.61
VPS26A-205ENST00000489656 SLC38A11Q08AI6 406 aa11.21□□□□□ -0.61
VPS26A-205ENST00000489656 ZNF266Q14584 549 aa11.21□□□□□ -0.61
VPS26A-205ENST00000489656 TMEM219Q86XT9 240 aa11.21□□□□□ -0.61
VPS26A-205ENST00000489656 TMEM217Q8N7C4 229 aa11.21□□□□□ -0.61
VPS26A-205ENST00000489656 OR10P1Q8NGE3 313 aa11.21□□□□□ -0.61
VPS26A-205ENST00000489656 SSMEM1Q8WWF3 244 aa11.21□□□□□ -0.61
VPS26A-205ENST00000489656 C22orf15Q8WYQ4 148 aa11.21□□□□□ -0.61
VPS26A-205ENST00000489656 ST8SIA2Q92186 375 aa11.21□□□□□ -0.61
VPS26A-205ENST00000489656 ATP5SQ99766 215 aa11.21□□□□□ -0.61
VPS26A-205ENST00000489656 GGACTQ9BVM4 153 aa11.21□□□□□ -0.61
VPS26A-205ENST00000489656 SMIM3Q9BZL3 60 aa11.21□□□□□ -0.61
VPS26A-205ENST00000489656 ARV1Q9H2C2 271 aa11.21□□□□□ -0.61
VPS26A-205ENST00000489656 WFDC1Q9HC57 220 aa11.21□□□□□ -0.61
VPS26A-205ENST00000489656 SONP18583 2426 aaKnown RBP11.21□□□□□ -0.61
VPS26A-205ENST00000489656 BORCS7-ASMTA0A0B4J1R7 106 aa11.2□□□□□ -0.62
VPS26A-205ENST00000489656 FNDC10F2Z333 226 aa11.2□□□□□ -0.62
VPS26A-205ENST00000489656 RGS13O14921 159 aa11.2□□□□□ -0.62
VPS26A-205ENST00000489656 IGHV4-59P01825 116 aa11.2□□□□□ -0.62
VPS26A-205ENST00000489656 TPT1P13693 172 aaKnown RBP11.2□□□□□ -0.62
VPS26A-205ENST00000489656 SRP14P37108 136 aaKnown RBP11.2□□□□□ -0.62
VPS26A-205ENST00000489656 NDPQ00604 133 aa11.2□□□□□ -0.62
VPS26A-205ENST00000489656 LY6EQ16553 131 aa11.2□□□□□ -0.62
VPS26A-205ENST00000489656 VWC2Q2TAL6 325 aa11.2□□□□□ -0.62
VPS26A-205ENST00000489656 RPL7L1Q6DKI1 246 aaKnown RBP11.2□□□□□ -0.62
VPS26A-205ENST00000489656 TEX261Q6UWH6 196 aa11.2□□□□□ -0.62
VPS26A-205ENST00000489656 ETV3LQ6ZN32 361 aa11.2□□□□□ -0.62
VPS26A-205ENST00000489656 TMEM86BQ8N661 226 aa11.2□□□□□ -0.62
VPS26A-205ENST00000489656 PARD6GQ9BYG4 376 aaPredicted RBP11.2□□□□□ -0.62
VPS26A-205ENST00000489656 BTBD17A6NE02 478 aa11.19□□□□□ -0.62
VPS26A-205ENST00000489656 CRYGCP07315 174 aa11.19□□□□□ -0.62
VPS26A-205ENST00000489656 AREGP15514 252 aa11.19□□□□□ -0.62
VPS26A-205ENST00000489656 CTRB1P17538 263 aa11.19□□□□□ -0.62
VPS26A-205ENST00000489656 CRIP2P52943 208 aaPredicted RBP11.19□□□□□ -0.62
VPS26A-205ENST00000489656 DLK1P80370 383 aa11.19□□□□□ -0.62
VPS26A-205ENST00000489656 SCGB2A2Q13296 93 aa11.19□□□□□ -0.62
VPS26A-205ENST00000489656 CLINT1Q14677 625 aa11.19□□□□□ -0.62
VPS26A-205ENST00000489656 CTRB2Q6GPI1 263 aa11.19□□□□□ -0.62
VPS26A-205ENST00000489656 OR8G2PQ6IF36 304 aa11.19□□□□□ -0.62
VPS26A-205ENST00000489656 LILRB2Q8N423 598 aa11.19□□□□□ -0.62
VPS26A-205ENST00000489656 OR1P1Q8NH06 330 aa11.19□□□□□ -0.62
VPS26A-205ENST00000489656 SGMS2Q8NHU3 365 aa11.19□□□□□ -0.62
VPS26A-205ENST00000489656 RNASEH2CQ8TDP1 164 aaKnown RBP11.19□□□□□ -0.62
VPS26A-205ENST00000489656 PHYHIPLQ96FC7 376 aa11.19□□□□□ -0.62
VPS26A-205ENST00000489656 P2RX4Q99571 388 aa11.19□□□□□ -0.62
VPS26A-205ENST00000489656 HSPB9Q9BQS6 159 aa11.19□□□□□ -0.62
VPS26A-205ENST00000489656 VPREB3Q9UKI3 123 aa11.19□□□□□ -0.62
VPS26A-205ENST00000489656 PAIP2BQ9ULR5 123 aaKnown RBP11.19□□□□□ -0.62
VPS26A-205ENST00000489656 NPIPB5A8MRT5 1133 aa11.18□□□□□ -0.62
VPS26A-205ENST00000489656 TSPAN9O75954 239 aa11.18□□□□□ -0.62
VPS26A-205ENST00000489656 LY6G6DO95868 133 aa11.18□□□□□ -0.62
VPS26A-205ENST00000489656 IFNA4P05014 189 aa11.18□□□□□ -0.62
VPS26A-205ENST00000489656 EGR2P11161 476 aaPredicted RBP11.18□□□□□ -0.62
VPS26A-205ENST00000489656 ASPHD1Q5U4P2 390 aa11.18□□□□□ -0.62
VPS26A-205ENST00000489656 IL17RELQ6ZVW7 336 aa11.18□□□□□ -0.62
VPS26A-205ENST00000489656 ZNF767PQ75MW2 155 aa11.18□□□□□ -0.62
VPS26A-205ENST00000489656 BAP18Q8IXM2 172 aa11.18□□□□□ -0.62
VPS26A-205ENST00000489656 TTC9CQ8N5M4 171 aa11.18□□□□□ -0.62
VPS26A-205ENST00000489656 OR1L6Q8NGR2 347 aa11.18□□□□□ -0.62
VPS26A-205ENST00000489656 ABHD5Q8WTS1 349 aa11.18□□□□□ -0.62
VPS26A-205ENST00000489656 TMEM68Q96MH6 324 aa11.18□□□□□ -0.62
VPS26A-205ENST00000489656 GINS3Q9BRX5 216 aa11.18□□□□□ -0.62
VPS26A-205ENST00000489656 TMEM147Q9BVK8 224 aa11.18□□□□□ -0.62
VPS26A-205ENST00000489656 F11RQ9Y624 299 aaKnown RBP11.18□□□□□ -0.62
VPS26A-205ENST00000489656 CORTO00230 105 aa11.17□□□□□ -0.62
VPS26A-205ENST00000489656 CFDP00746 253 aaPredicted RBP11.17□□□□□ -0.62
VPS26A-205ENST00000489656 IFNA7P01567 189 aa11.17□□□□□ -0.62
VPS26A-205ENST00000489656 IGHG2P01859 326 aa11.17□□□□□ -0.62
VPS26A-205ENST00000489656 CD99P14209 185 aa11.17□□□□□ -0.62
VPS26A-205ENST00000489656 GPX4P36969 197 aaPredicted RBP11.17□□□□□ -0.62
VPS26A-205ENST00000489656 PRR20EP86478 221 aa11.17□□□□□ -0.62
VPS26A-205ENST00000489656 PRR20CP86479 221 aa11.17□□□□□ -0.62
VPS26A-205ENST00000489656 PRR20DP86480 221 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms