RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 OR5AC1P0C628 307 aa10.23□□□□□ -0.77
CCL28-202ENST00000489442 SPNP16150 400 aa10.23□□□□□ -0.77
CCL28-202ENST00000489442 UCP1P25874 307 aa10.23□□□□□ -0.77
CCL28-202ENST00000489442 INPP1P49441 399 aa10.23□□□□□ -0.77
CCL28-202ENST00000489442 HSPE1P61604 102 aaKnown RBP10.23□□□□□ -0.77
CCL28-202ENST00000489442 DHODHQ02127 395 aa10.23□□□□□ -0.77
CCL28-202ENST00000489442 IZUMO4Q1ZYL8 232 aa10.23□□□□□ -0.77
CCL28-202ENST00000489442 KLK9Q2XQG4 91 aa10.23□□□□□ -0.77
CCL28-202ENST00000489442 SGPP2Q8IWX5 399 aa10.23□□□□□ -0.77
CCL28-202ENST00000489442 TMEM222Q9H0R3 208 aa10.23□□□□□ -0.77
CCL28-202ENST00000489442 C5orf66Q9H5L9 145 aa10.23□□□□□ -0.77
CCL28-202ENST00000489442 PLEKHA3Q9HB20 300 aa10.23□□□□□ -0.77
CCL28-202ENST00000489442 KLK9Q9UKQ9 250 aa10.23□□□□□ -0.77
CCL28-202ENST00000489442 KCNIP3Q9Y2W7 256 aa10.23□□□□□ -0.77
CCL28-202ENST00000489442 F11RQ9Y624 299 aaKnown RBP10.23□□□□□ -0.77
CCL28-202ENST00000489442 MFSD2BA6NFX1 497 aa10.22□□□□□ -0.77
CCL28-202ENST00000489442 AKR1C4P17516 323 aa10.22□□□□□ -0.77
CCL28-202ENST00000489442 ERHP84090 104 aaKnown RBP10.22□□□□□ -0.77
CCL28-202ENST00000489442 PRCDQ00LT1 54 aa10.22□□□□□ -0.77
CCL28-202ENST00000489442 CD69Q07108 199 aa10.22□□□□□ -0.77
CCL28-202ENST00000489442 FAM106AQ4KMX7 169 aa10.22□□□□□ -0.77
CCL28-202ENST00000489442 ZNF57Q68EA5 555 aaPredicted RBP10.22□□□□□ -0.77
CCL28-202ENST00000489442 HAPLN4Q86UW8 402 aa10.22□□□□□ -0.77
CCL28-202ENST00000489442 SLC35G3Q8N808 338 aa10.22□□□□□ -0.77
CCL28-202ENST00000489442 CCDC140Q96MF4 163 aa10.22□□□□□ -0.77
CCL28-202ENST00000489442 ZC4H2Q9NQZ6 224 aa10.22□□□□□ -0.77
CCL28-202ENST00000489442 COL7A1Q02388 2944 aa10.22□□□□□ -0.77
CCL28-202ENST00000489442 ZNF320A2RRD8 509 aa10.21□□□□□ -0.78
CCL28-202ENST00000489442 CRYM-AS1A6NIL9 109 aa10.21□□□□□ -0.78
CCL28-202ENST00000489442 CDS2O95674 445 aa10.21□□□□□ -0.78
CCL28-202ENST00000489442 IGLV1-51P01701 117 aa10.21□□□□□ -0.78
CCL28-202ENST00000489442 GP9P14770 177 aa10.21□□□□□ -0.78
CCL28-202ENST00000489442 GPR183P32249 361 aa10.21□□□□□ -0.78
CCL28-202ENST00000489442 SNCAP37840 140 aa10.21□□□□□ -0.78
CCL28-202ENST00000489442 ETV6P41212 452 aa10.21□□□□□ -0.78
CCL28-202ENST00000489442 KLF9Q13886 244 aaPredicted RBP10.21□□□□□ -0.78
CCL28-202ENST00000489442 ZNF79Q15937 498 aa10.21□□□□□ -0.78
CCL28-202ENST00000489442 SPINK9Q5DT21 86 aa10.21□□□□□ -0.78
CCL28-202ENST00000489442 PLET1Q6UQ28 207 aa10.21□□□□□ -0.78
CCL28-202ENST00000489442 OR1P1Q8NH06 330 aa10.21□□□□□ -0.78
CCL28-202ENST00000489442 VN1R17PQ8TDU5 208 aa10.21□□□□□ -0.78
CCL28-202ENST00000489442 GLYATL2Q8WU03 294 aa10.21□□□□□ -0.78
CCL28-202ENST00000489442 RBPMSQ93062 196 aaKnown RBP10.21□□□□□ -0.78
CCL28-202ENST00000489442 TRIM63Q969Q1 353 aa10.21□□□□□ -0.78
CCL28-202ENST00000489442 ENY2Q9NPA8 101 aa10.21□□□□□ -0.78
CCL28-202ENST00000489442 DMRT1Q9Y5R6 373 aa10.21□□□□□ -0.78
CCL28-202ENST00000489442 IGHV3-21A0A0B4J1V1 117 aa10.2□□□□□ -0.78
CCL28-202ENST00000489442 A0A0B4J293 547 aa10.2□□□□□ -0.78
CCL28-202ENST00000489442 ST8SIA3O43173 380 aa10.2□□□□□ -0.78
CCL28-202ENST00000489442 CSN3P07498 182 aa10.2□□□□□ -0.78
CCL28-202ENST00000489442 TMEM268Q5VZI3 342 aa10.2□□□□□ -0.78
CCL28-202ENST00000489442 TRIQKQ629K1 86 aa10.2□□□□□ -0.78
CCL28-202ENST00000489442 IL34Q6ZMJ4 242 aa10.2□□□□□ -0.78
CCL28-202ENST00000489442 GPHB5Q86YW7 130 aa10.2□□□□□ -0.78
CCL28-202ENST00000489442 FAM219AQ8IW50 185 aa10.2□□□□□ -0.78
CCL28-202ENST00000489442 OR2C3Q8N628 320 aa10.2□□□□□ -0.78
CCL28-202ENST00000489442 ZNF502Q8TBZ5 544 aa10.2□□□□□ -0.78
CCL28-202ENST00000489442 DYNLRB2Q8TF09 96 aa10.2□□□□□ -0.78
CCL28-202ENST00000489442 DEDD2Q8WXF8 326 aa10.2□□□□□ -0.78
CCL28-202ENST00000489442 MISP3Q96FF7 219 aa10.2□□□□□ -0.78
CCL28-202ENST00000489442 SMAD5-AS1Q9Y6J3 95 aa10.2□□□□□ -0.78
CCL28-202ENST00000489442 OR2T8A6NH00 312 aa10.19□□□□□ -0.78
CCL28-202ENST00000489442 P0C879 139 aa10.19□□□□□ -0.78
CCL28-202ENST00000489442 ANXA3P12429 323 aa10.19□□□□□ -0.78
CCL28-202ENST00000489442 HOXA1P49639 335 aaPredicted RBP10.19□□□□□ -0.78
CCL28-202ENST00000489442 MFAP2P55001 183 aa10.19□□□□□ -0.78
CCL28-202ENST00000489442 Q56UQ5 140 aa10.19□□□□□ -0.78
CCL28-202ENST00000489442 LCN12Q6JVE5 192 aa10.19□□□□□ -0.78
CCL28-202ENST00000489442 TMED4Q7Z7H5 227 aa10.19□□□□□ -0.78
CCL28-202ENST00000489442 SELENOHQ8IZQ5 122 aaKnown RBP10.19□□□□□ -0.78
CCL28-202ENST00000489442 UBAC2Q8NBM4 344 aa10.19□□□□□ -0.78
CCL28-202ENST00000489442 SRRQ9GZT4 340 aa10.19□□□□□ -0.78
CCL28-202ENST00000489442 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.19□□□□□ -0.78
CCL28-202ENST00000489442 C21orf62Q9NYP8 219 aa10.19□□□□□ -0.78
CCL28-202ENST00000489442 SIGLEC8Q9NYZ4 499 aa10.19□□□□□ -0.78
CCL28-202ENST00000489442 LSM4Q9Y4Z0 139 aaKnown RBP10.19□□□□□ -0.78
CCL28-202ENST00000489442 IGHV3-35A0A0C4DH35 117 aa10.18□□□□□ -0.78
CCL28-202ENST00000489442 A0A0G2JRQ6 117 aa10.18□□□□□ -0.78
CCL28-202ENST00000489442 LGALS9O00182 355 aa10.18□□□□□ -0.78
CCL28-202ENST00000489442 TGOLN2O43493 480 aa10.18□□□□□ -0.78
CCL28-202ENST00000489442 SUB1P53999 127 aaKnown RBP eCLIP10.18□□□□□ -0.78
CCL28-202ENST00000489442 LHFPL5Q8TAF8 219 aa10.18□□□□□ -0.78
CCL28-202ENST00000489442 SCARB1Q8WTV0 552 aa10.18□□□□□ -0.78
CCL28-202ENST00000489442 PINX1Q96BK5 328 aaKnown RBP10.18□□□□□ -0.78
CCL28-202ENST00000489442 GALNT14Q96FL9 552 aa10.18□□□□□ -0.78
CCL28-202ENST00000489442 BSCL2Q96G97 398 aaPredicted RBP10.18□□□□□ -0.78
CCL28-202ENST00000489442 B9D2Q9BPU9 175 aa10.18□□□□□ -0.78
CCL28-202ENST00000489442 SLC25A21Q9BQT8 299 aaPredicted RBP10.18□□□□□ -0.78
CCL28-202ENST00000489442 PALMDQ9NP74 551 aa10.18□□□□□ -0.78
CCL28-202ENST00000489442 GAR1Q9NY12 217 aaKnown RBP10.18□□□□□ -0.78
CCL28-202ENST00000489442 C2orf70A6NJV1 201 aa10.17□□□□□ -0.78
CCL28-202ENST00000489442 FOLR2P14207 255 aa10.17□□□□□ -0.78
CCL28-202ENST00000489442 SRPXP78539 464 aa10.17□□□□□ -0.78
CCL28-202ENST00000489442 TMEM187Q14656 261 aa10.17□□□□□ -0.78
CCL28-202ENST00000489442 SPSB3Q6PJ21 355 aa10.17□□□□□ -0.78
CCL28-202ENST00000489442 ZNF114Q8NC26 417 aa10.17□□□□□ -0.78
CCL28-202ENST00000489442 IL22RA2Q969J5 263 aa10.17□□□□□ -0.78
CCL28-202ENST00000489442 TMEM230Q96A57 120 aa10.17□□□□□ -0.78
CCL28-202ENST00000489442 GPR146Q96CH1 333 aa10.17□□□□□ -0.78
CCL28-202ENST00000489442 ATP6V0BQ99437 205 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms