RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 SMAD7O15105 426 aaKnown RBP10.17□□□□□ -0.78
TOP3A-206ENST00000489131 IFNA10P01566 189 aa10.17□□□□□ -0.78
TOP3A-206ENST00000489131 IFNA7P01567 189 aa10.17□□□□□ -0.78
TOP3A-206ENST00000489131 AMY1AP04745 511 aa10.17□□□□□ -0.78
TOP3A-206ENST00000489131 OR8U8P0C7N1 319 aa10.17□□□□□ -0.78
TOP3A-206ENST00000489131 IER3P46695 156 aa10.17□□□□□ -0.78
TOP3A-206ENST00000489131 CX3CL1P78423 397 aa10.17□□□□□ -0.78
TOP3A-206ENST00000489131 DLK1P80370 383 aa10.17□□□□□ -0.78
TOP3A-206ENST00000489131 DEFB112Q30KQ8 113 aa10.17□□□□□ -0.78
TOP3A-206ENST00000489131 RPL7L1Q6DKI1 246 aaKnown RBP10.17□□□□□ -0.78
TOP3A-206ENST00000489131 Q6YL49 198 aa10.17□□□□□ -0.78
TOP3A-206ENST00000489131 GINS3Q9BRX5 216 aa10.17□□□□□ -0.78
TOP3A-206ENST00000489131 SLC25A33Q9BSK2 321 aa10.17□□□□□ -0.78
TOP3A-206ENST00000489131 ZNF580Q9UK33 172 aa10.17□□□□□ -0.78
TOP3A-206ENST00000489131 SOX21Q9Y651 276 aaPredicted RBP10.17□□□□□ -0.78
TOP3A-206ENST00000489131 CELSR1Q9NYQ6 3014 aa10.16□□□□□ -0.78
TOP3A-206ENST00000489131 FLNAP21333 2647 aaKnown RBP10.16□□□□□ -0.78
TOP3A-206ENST00000489131 NCBP2LA6PVI3 153 aaKnown RBP10.16□□□□□ -0.78
TOP3A-206ENST00000489131 H3BUX3 64 aa10.16□□□□□ -0.78
TOP3A-206ENST00000489131 TSPAN9O75954 239 aa10.16□□□□□ -0.78
TOP3A-206ENST00000489131 CFDP00746 253 aaPredicted RBP10.16□□□□□ -0.78
TOP3A-206ENST00000489131 OPN1MWP04001 364 aa10.16□□□□□ -0.78
TOP3A-206ENST00000489131 CRYGCP07315 174 aa10.16□□□□□ -0.78
TOP3A-206ENST00000489131 OPN1MW2P0DN77 364 aa10.16□□□□□ -0.78
TOP3A-206ENST00000489131 OPN1MW3P0DN78 364 aa10.16□□□□□ -0.78
TOP3A-206ENST00000489131 SUB1P53999 127 aaKnown RBP eCLIP10.16□□□□□ -0.78
TOP3A-206ENST00000489131 SLC38A11Q08AI6 406 aa10.16□□□□□ -0.78
TOP3A-206ENST00000489131 FXYD3Q14802 87 aa10.16□□□□□ -0.78
TOP3A-206ENST00000489131 CLEC9AQ6UXN8 241 aa10.16□□□□□ -0.78
TOP3A-206ENST00000489131 BCL6BQ8N143 479 aaPredicted RBP10.16□□□□□ -0.78
TOP3A-206ENST00000489131 TMEM217Q8N7C4 229 aa10.16□□□□□ -0.78
TOP3A-206ENST00000489131 OR1P1Q8NH06 330 aa10.16□□□□□ -0.78
TOP3A-206ENST00000489131 RNASEH2CQ8TDP1 164 aaKnown RBP10.16□□□□□ -0.78
TOP3A-206ENST00000489131 ARPC1AQ92747 370 aa10.16□□□□□ -0.78
TOP3A-206ENST00000489131 TMEM68Q96MH6 324 aa10.16□□□□□ -0.78
TOP3A-206ENST00000489131 RASL11BQ9BPW5 248 aa10.16□□□□□ -0.78
TOP3A-206ENST00000489131 TMEM147Q9BVK8 224 aa10.16□□□□□ -0.78
TOP3A-206ENST00000489131 HINT2Q9BX68 163 aa10.16□□□□□ -0.78
TOP3A-206ENST00000489131 TEP1Q99973 2627 aaKnown RBP10.15□□□□□ -0.78
TOP3A-206ENST00000489131 NPIPB5A8MRT5 1133 aa10.15□□□□□ -0.78
TOP3A-206ENST00000489131 SEC11BP0C7V7 166 aa10.15□□□□□ -0.78
TOP3A-206ENST00000489131 OR13C7P0DN81 318 aa10.15□□□□□ -0.78
TOP3A-206ENST00000489131 EGR2P11161 476 aaPredicted RBP10.15□□□□□ -0.78
TOP3A-206ENST00000489131 FOSL1P15407 271 aa10.15□□□□□ -0.78
TOP3A-206ENST00000489131 CTRB1P17538 263 aa10.15□□□□□ -0.78
TOP3A-206ENST00000489131 SNCAP37840 140 aa10.15□□□□□ -0.78
TOP3A-206ENST00000489131 NDPQ00604 133 aa10.15□□□□□ -0.78
TOP3A-206ENST00000489131 EXOSC2Q13868 293 aaKnown RBP10.15□□□□□ -0.78
TOP3A-206ENST00000489131 CTRB2Q6GPI1 263 aa10.15□□□□□ -0.78
TOP3A-206ENST00000489131 EIF5AL1Q6IS14 154 aaKnown RBP10.15□□□□□ -0.78
TOP3A-206ENST00000489131 ETV3LQ6ZN32 361 aa10.15□□□□□ -0.78
TOP3A-206ENST00000489131 CENPVQ7Z7K6 275 aaPredicted RBP10.15□□□□□ -0.78
TOP3A-206ENST00000489131 TMEM86BQ8N661 226 aa10.15□□□□□ -0.78
TOP3A-206ENST00000489131 OR1L6Q8NGR2 347 aa10.15□□□□□ -0.78
TOP3A-206ENST00000489131 SCARB1Q8WTV0 552 aa10.15□□□□□ -0.78
TOP3A-206ENST00000489131 CACNG8Q8WXS5 425 aa10.15□□□□□ -0.78
TOP3A-206ENST00000489131 ZNF48Q96MX3 618 aaPredicted RBP10.15□□□□□ -0.78
TOP3A-206ENST00000489131 P2RX4Q99571 388 aa10.15□□□□□ -0.78
TOP3A-206ENST00000489131 SMIM3Q9BZL3 60 aa10.15□□□□□ -0.78
TOP3A-206ENST00000489131 F11RQ9Y624 299 aaKnown RBP10.15□□□□□ -0.78
TOP3A-206ENST00000489131 OTOGQ6ZRI0 2925 aa10.14□□□□□ -0.79
TOP3A-206ENST00000489131 CORTO00230 105 aa10.14□□□□□ -0.79
TOP3A-206ENST00000489131 CNIH1O95406 144 aa10.14□□□□□ -0.79
TOP3A-206ENST00000489131 SPP1P10451 314 aa10.14□□□□□ -0.79
TOP3A-206ENST00000489131 AREGP15514 252 aa10.14□□□□□ -0.79
TOP3A-206ENST00000489131 GPX4P36969 197 aaPredicted RBP10.14□□□□□ -0.79
TOP3A-206ENST00000489131 CLINT1Q14677 625 aa10.14□□□□□ -0.79
TOP3A-206ENST00000489131 C19orf54Q5BKX5 351 aa10.14□□□□□ -0.79
TOP3A-206ENST00000489131 ASPHD1Q5U4P2 390 aa10.14□□□□□ -0.79
TOP3A-206ENST00000489131 TTC9CQ8N5M4 171 aa10.14□□□□□ -0.79
TOP3A-206ENST00000489131 SGMS2Q8NHU3 365 aa10.14□□□□□ -0.79
TOP3A-206ENST00000489131 SSMEM1Q8WWF3 244 aa10.14□□□□□ -0.79
TOP3A-206ENST00000489131 TMUB1Q9BVT8 246 aa10.14□□□□□ -0.79
TOP3A-206ENST00000489131 UQCC1Q9NVA1 299 aa10.14□□□□□ -0.79
TOP3A-206ENST00000489131 ZNF469Q96JG9 3925 aaPredicted RBP10.13□□□□□ -0.79
TOP3A-206ENST00000489131 MDFIC2A0A1B0GVS7 189 aa10.13□□□□□ -0.79
TOP3A-206ENST00000489131 MPDU1O75352 247 aa10.13□□□□□ -0.79
TOP3A-206ENST00000489131 BRI3O95415 125 aa10.13□□□□□ -0.79
TOP3A-206ENST00000489131 IFNA5P01569 189 aa10.13□□□□□ -0.79
TOP3A-206ENST00000489131 IGHV4-59P01825 116 aa10.13□□□□□ -0.79
TOP3A-206ENST00000489131 IFNA4P05014 189 aa10.13□□□□□ -0.79
TOP3A-206ENST00000489131 IGF1P05019 195 aa10.13□□□□□ -0.79
TOP3A-206ENST00000489131 GNB1P62873 340 aa10.13□□□□□ -0.79
TOP3A-206ENST00000489131 CD69Q07108 199 aa10.13□□□□□ -0.79
TOP3A-206ENST00000489131 OR8G2PQ6IF36 304 aa10.13□□□□□ -0.79
TOP3A-206ENST00000489131 LILRB2Q8N423 598 aa10.13□□□□□ -0.79
TOP3A-206ENST00000489131 GNPNAT1Q96EK6 184 aaPredicted RBP10.13□□□□□ -0.79
TOP3A-206ENST00000489131 HSPB9Q9BQS6 159 aa10.13□□□□□ -0.79
TOP3A-206ENST00000489131 PSMG3Q9BT73 122 aaPredicted RBP10.13□□□□□ -0.79
TOP3A-206ENST00000489131 WDR61Q9GZS3 305 aaKnown RBP10.13□□□□□ -0.79
TOP3A-206ENST00000489131 UBQLN2Q9UHD9 624 aa10.13□□□□□ -0.79
TOP3A-206ENST00000489131 VPREB3Q9UKI3 123 aa10.13□□□□□ -0.79
TOP3A-206ENST00000489131 WDR83OSQ9Y284 106 aa10.13□□□□□ -0.79
TOP3A-206ENST00000489131 FBXO7Q9Y3I1 522 aa10.13□□□□□ -0.79
TOP3A-206ENST00000489131 LSM4Q9Y4Z0 139 aaKnown RBP10.13□□□□□ -0.79
TOP3A-206ENST00000489131 TIMM9Q9Y5J7 89 aa10.13□□□□□ -0.79
TOP3A-206ENST00000489131 CSPG4Q6UVK1 2322 aa10.12□□□□□ -0.79
TOP3A-206ENST00000489131 SOX15O60248 233 aa10.12□□□□□ -0.79
TOP3A-206ENST00000489131 FBXO24O75426 580 aa10.12□□□□□ -0.79
TOP3A-206ENST00000489131 IGHG2P01859 326 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms