RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 S4R3C0 116 aa10.92□□□□□ -0.66
BRCA1-218ENST00000489037 OR2C1O95371 312 aa10.91□□□□□ -0.66
BRCA1-218ENST00000489037 IFNA17P01571 189 aa10.91□□□□□ -0.66
BRCA1-218ENST00000489037 IGLV1-51P01701 117 aa10.91□□□□□ -0.66
BRCA1-218ENST00000489037 CLEC3BP05452 202 aa10.91□□□□□ -0.66
BRCA1-218ENST00000489037 GP9P14770 177 aa10.91□□□□□ -0.66
BRCA1-218ENST00000489037 INPP1P49441 399 aa10.91□□□□□ -0.66
BRCA1-218ENST00000489037 PRCDQ00LT1 54 aa10.91□□□□□ -0.66
BRCA1-218ENST00000489037 C5orf66Q9H5L9 145 aa10.91□□□□□ -0.66
BRCA1-218ENST00000489037 PLEKHA3Q9HB20 300 aa10.91□□□□□ -0.66
BRCA1-218ENST00000489037 SIGLEC8Q9NYZ4 499 aa10.91□□□□□ -0.66
BRCA1-218ENST00000489037 MFSD2BA6NFX1 497 aa10.9□□□□□ -0.66
BRCA1-218ENST00000489037 DBX1A6NMT0 343 aa10.9□□□□□ -0.66
BRCA1-218ENST00000489037 IGKV1-5P01602 117 aa10.9□□□□□ -0.66
BRCA1-218ENST00000489037 OR5AC1P0C628 307 aa10.9□□□□□ -0.66
BRCA1-218ENST00000489037 PLET1Q6UQ28 207 aa10.9□□□□□ -0.66
BRCA1-218ENST00000489037 CCDC190Q86UF4 302 aa10.9□□□□□ -0.66
BRCA1-218ENST00000489037 GPHB5Q86YW7 130 aa10.9□□□□□ -0.66
BRCA1-218ENST00000489037 FAM219AQ8IW50 185 aa10.9□□□□□ -0.66
BRCA1-218ENST00000489037 SLC35G3Q8N808 338 aa10.9□□□□□ -0.66
BRCA1-218ENST00000489037 OR1P1Q8NH06 330 aa10.9□□□□□ -0.66
BRCA1-218ENST00000489037 DYNLRB2Q8TF09 96 aa10.9□□□□□ -0.66
BRCA1-218ENST00000489037 DEDD2Q8WXF8 326 aa10.9□□□□□ -0.66
BRCA1-218ENST00000489037 CCDC140Q96MF4 163 aa10.9□□□□□ -0.66
BRCA1-218ENST00000489037 B9D2Q9BPU9 175 aa10.9□□□□□ -0.66
BRCA1-218ENST00000489037 TMEM222Q9H0R3 208 aa10.9□□□□□ -0.66
BRCA1-218ENST00000489037 ENY2Q9NPA8 101 aa10.9□□□□□ -0.66
BRCA1-218ENST00000489037 SMAD5-AS1Q9Y6J3 95 aa10.9□□□□□ -0.66
BRCA1-218ENST00000489037 V9GYH0 126 aa10.9□□□□□ -0.66
BRCA1-218ENST00000489037 ZNF320A2RRD8 509 aa10.89□□□□□ -0.67
BRCA1-218ENST00000489037 CRYM-AS1A6NIL9 109 aa10.89□□□□□ -0.67
BRCA1-218ENST00000489037 LGALS9O00182 355 aa10.89□□□□□ -0.67
BRCA1-218ENST00000489037 CDS2O95674 445 aa10.89□□□□□ -0.67
BRCA1-218ENST00000489037 HLA-AP01891 365 aaKnown RBP10.89□□□□□ -0.67
BRCA1-218ENST00000489037 CSN3P07498 182 aa10.89□□□□□ -0.67
BRCA1-218ENST00000489037 ANXA3P12429 323 aa10.89□□□□□ -0.67
BRCA1-218ENST00000489037 GPR183P32249 361 aa10.89□□□□□ -0.67
BRCA1-218ENST00000489037 SNCAP37840 140 aa10.89□□□□□ -0.67
BRCA1-218ENST00000489037 ZNF57Q68EA5 555 aaPredicted RBP10.89□□□□□ -0.67
BRCA1-218ENST00000489037 LCN12Q6JVE5 192 aa10.89□□□□□ -0.67
BRCA1-218ENST00000489037 HAPLN4Q86UW8 402 aa10.89□□□□□ -0.67
BRCA1-218ENST00000489037 OR2C3Q8N628 320 aa10.89□□□□□ -0.67
BRCA1-218ENST00000489037 ZNF502Q8TBZ5 544 aa10.89□□□□□ -0.67
BRCA1-218ENST00000489037 RBPMSQ93062 196 aaKnown RBP10.89□□□□□ -0.67
BRCA1-218ENST00000489037 PALMDQ9NP74 551 aa10.89□□□□□ -0.67
BRCA1-218ENST00000489037 GAR1Q9NY12 217 aaKnown RBP10.89□□□□□ -0.67
BRCA1-218ENST00000489037 C21orf62Q9NYP8 219 aa10.89□□□□□ -0.67
BRCA1-218ENST00000489037 LSM4Q9Y4Z0 139 aaKnown RBP10.89□□□□□ -0.67
BRCA1-218ENST00000489037 PIGBOS1A0A0B4J2F0 54 aa10.88□□□□□ -0.67
BRCA1-218ENST00000489037 AKR1C4P17516 323 aa10.88□□□□□ -0.67
BRCA1-218ENST00000489037 ETV6P41212 452 aa10.88□□□□□ -0.67
BRCA1-218ENST00000489037 SUB1P53999 127 aaKnown RBP eCLIP10.88□□□□□ -0.67
BRCA1-218ENST00000489037 KLF9Q13886 244 aaPredicted RBP10.88□□□□□ -0.67
BRCA1-218ENST00000489037 IZUMO4Q1ZYL8 232 aa10.88□□□□□ -0.67
BRCA1-218ENST00000489037 IL34Q6ZMJ4 242 aa10.88□□□□□ -0.67
BRCA1-218ENST00000489037 OR2K2Q8NGT1 345 aa10.88□□□□□ -0.67
BRCA1-218ENST00000489037 GLYATL2Q8WU03 294 aa10.88□□□□□ -0.67
BRCA1-218ENST00000489037 MISP3Q96FF7 219 aa10.88□□□□□ -0.67
BRCA1-218ENST00000489037 ATP6V0BQ99437 205 aa10.88□□□□□ -0.67
BRCA1-218ENST00000489037 DMRT1Q9Y5R6 373 aa10.88□□□□□ -0.67
BRCA1-218ENST00000489037 A0A0B4J293 547 aa10.87□□□□□ -0.67
BRCA1-218ENST00000489037 ST8SIA3O43173 380 aa10.87□□□□□ -0.67
BRCA1-218ENST00000489037 TGOLN2O43493 480 aa10.87□□□□□ -0.67
BRCA1-218ENST00000489037 P0C879 139 aa10.87□□□□□ -0.67
BRCA1-218ENST00000489037 HOXA1P49639 335 aaPredicted RBP10.87□□□□□ -0.67
BRCA1-218ENST00000489037 ZNF79Q15937 498 aa10.87□□□□□ -0.67
BRCA1-218ENST00000489037 Q56UQ5 140 aa10.87□□□□□ -0.67
BRCA1-218ENST00000489037 TMEM268Q5VZI3 342 aa10.87□□□□□ -0.67
BRCA1-218ENST00000489037 TRIQKQ629K1 86 aa10.87□□□□□ -0.67
BRCA1-218ENST00000489037 SPSB3Q6PJ21 355 aa10.87□□□□□ -0.67
BRCA1-218ENST00000489037 SELENOHQ8IZQ5 122 aaKnown RBP10.87□□□□□ -0.67
BRCA1-218ENST00000489037 UBAC2Q8NBM4 344 aa10.87□□□□□ -0.67
BRCA1-218ENST00000489037 SCARB1Q8WTV0 552 aa10.87□□□□□ -0.67
BRCA1-218ENST00000489037 TRIM63Q969Q1 353 aa10.87□□□□□ -0.67
BRCA1-218ENST00000489037 BSCL2Q96G97 398 aaPredicted RBP10.87□□□□□ -0.67
BRCA1-218ENST00000489037 ZC4H2Q9NQZ6 224 aa10.87□□□□□ -0.67
BRCA1-218ENST00000489037 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.87□□□□□ -0.67
BRCA1-218ENST00000489037 CACFD1Q9UGQ2 172 aa10.87□□□□□ -0.67
BRCA1-218ENST00000489037 IGHV3-21A0A0B4J1V1 117 aa10.86□□□□□ -0.67
BRCA1-218ENST00000489037 OR2T8A6NH00 312 aa10.86□□□□□ -0.67
BRCA1-218ENST00000489037 C2orf70A6NJV1 201 aa10.86□□□□□ -0.67
BRCA1-218ENST00000489037 NHLRC4P0CG21 123 aaPredicted RBP10.86□□□□□ -0.67
BRCA1-218ENST00000489037 FOLR2P14207 255 aa10.86□□□□□ -0.67
BRCA1-218ENST00000489037 MFAP2P55001 183 aa10.86□□□□□ -0.67
BRCA1-218ENST00000489037 MFAP4P55083 255 aa10.86□□□□□ -0.67
BRCA1-218ENST00000489037 SRPXP78539 464 aa10.86□□□□□ -0.67
BRCA1-218ENST00000489037 SPINK9Q5DT21 86 aa10.86□□□□□ -0.67
BRCA1-218ENST00000489037 GTSCR1Q86UQ5 136 aa10.86□□□□□ -0.67
BRCA1-218ENST00000489037 ZNF114Q8NC26 417 aa10.86□□□□□ -0.67
BRCA1-218ENST00000489037 IL22RA2Q969J5 263 aa10.86□□□□□ -0.67
BRCA1-218ENST00000489037 GALNT14Q96FL9 552 aa10.86□□□□□ -0.67
BRCA1-218ENST00000489037 SLC25A21Q9BQT8 299 aaPredicted RBP10.86□□□□□ -0.67
BRCA1-218ENST00000489037 TECRQ9NZ01 308 aaKnown RBP10.86□□□□□ -0.67
BRCA1-218ENST00000489037 UFC1Q9Y3C8 167 aa10.86□□□□□ -0.67
BRCA1-218ENST00000489037 CORTO00230 105 aa10.85□□□□□ -0.67
BRCA1-218ENST00000489037 SPCS3P61009 180 aa10.85□□□□□ -0.67
BRCA1-218ENST00000489037 TMED4Q7Z7H5 227 aa10.85□□□□□ -0.67
BRCA1-218ENST00000489037 LGI3Q8N145 548 aa10.85□□□□□ -0.67
BRCA1-218ENST00000489037 MARC2Q969Z3 335 aa10.85□□□□□ -0.67
BRCA1-218ENST00000489037 PINX1Q96BK5 328 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms