RNA–Protein interactions for RNA: ENST00000488809.2

PTCH1-211, Transcript of patched 1, humanhuman

TSL 3

Gene PTCH1, Length 301 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-211ENST00000488809 FKBP14Q9NWM8 211 aa4.73□□□□□ -1.65
PTCH1-211ENST00000488809 COMMD9Q9P000 198 aa4.73□□□□□ -1.65
PTCH1-211ENST00000488809 ANXA10Q9UJ72 324 aa4.73□□□□□ -1.65
PTCH1-211ENST00000488809 IGHV3-21A0A0B4J1V1 117 aa4.72□□□□□ -1.65
PTCH1-211ENST00000488809 IGKV1D-13A0A0B4J2D9 117 aa4.72□□□□□ -1.65
PTCH1-211ENST00000488809 IFITM5A6NNB3 132 aa4.72□□□□□ -1.65
PTCH1-211ENST00000488809 ZNF705EA8MWA4 302 aaPredicted RBP4.72□□□□□ -1.65
PTCH1-211ENST00000488809 PTGES3LE9PB15 166 aa4.72□□□□□ -1.65
PTCH1-211ENST00000488809 CASQ2O14958 399 aaPredicted RBP4.72□□□□□ -1.65
PTCH1-211ENST00000488809 TNFSF12O43508 249 aa4.72□□□□□ -1.65
PTCH1-211ENST00000488809 GNG7O60262 68 aa4.72□□□□□ -1.65
PTCH1-211ENST00000488809 SNAPC5O75971 98 aa4.72□□□□□ -1.65
PTCH1-211ENST00000488809 RBMY1A1P0DJD3 496 aaKnown RBP4.72□□□□□ -1.65
PTCH1-211ENST00000488809 RBMY1CP0DJD4 496 aa4.72□□□□□ -1.65
PTCH1-211ENST00000488809 IGKV1-13P0DP09 117 aa4.72□□□□□ -1.65
PTCH1-211ENST00000488809 MFAP4P55083 255 aa4.72□□□□□ -1.65
PTCH1-211ENST00000488809 DEFB131AP59861 70 aa4.72□□□□□ -1.65
PTCH1-211ENST00000488809 RPS25P62851 125 aaKnown RBP4.72□□□□□ -1.65
PTCH1-211ENST00000488809 WT1-ASQ06250 92 aa4.72□□□□□ -1.65
PTCH1-211ENST00000488809 MLLT11Q13015 90 aaPredicted RBP4.72□□□□□ -1.65
PTCH1-211ENST00000488809 RBMY1FQ15415 496 aaKnown RBP4.72□□□□□ -1.65
PTCH1-211ENST00000488809 CDNFQ49AH0 187 aa4.72□□□□□ -1.65
PTCH1-211ENST00000488809 HACD4Q5VWC8 232 aa4.72□□□□□ -1.65
PTCH1-211ENST00000488809 FAM90A2PQ658T7 463 aa4.72□□□□□ -1.65
PTCH1-211ENST00000488809 LEMD1Q68G75 181 aa4.72□□□□□ -1.65
PTCH1-211ENST00000488809 TMEM91Q6ZNR0 172 aa4.72□□□□□ -1.65
PTCH1-211ENST00000488809 TPRA1Q86W33 373 aa4.72□□□□□ -1.65
PTCH1-211ENST00000488809 TSPAN14Q8NG11 270 aa4.72□□□□□ -1.65
PTCH1-211ENST00000488809 OR10W1Q8NGF6 305 aa4.72□□□□□ -1.65
PTCH1-211ENST00000488809 OR13F1Q8NGS4 319 aa4.72□□□□□ -1.65
PTCH1-211ENST00000488809 DGCR14Q96DF8 476 aaKnown RBP4.72□□□□□ -1.65
PTCH1-211ENST00000488809 TXN2Q99757 166 aa4.72□□□□□ -1.65
PTCH1-211ENST00000488809 HINT2Q9BX68 163 aa4.72□□□□□ -1.65
PTCH1-211ENST00000488809 C1QTNF4Q9BXJ3 329 aa4.72□□□□□ -1.65
PTCH1-211ENST00000488809 MS4A6AQ9H2W1 248 aa4.72□□□□□ -1.65
PTCH1-211ENST00000488809 VCXQ9H320 206 aa4.72□□□□□ -1.65
PTCH1-211ENST00000488809 FKBP11Q9NYL4 201 aa4.72□□□□□ -1.65
PTCH1-211ENST00000488809 TBC1D24Q9ULP9 559 aa4.72□□□□□ -1.65
PTCH1-211ENST00000488809 LSM2Q9Y333 95 aaKnown RBP4.72□□□□□ -1.65
PTCH1-211ENST00000488809 IGHV3-49A0A0A0MS15 119 aa4.71□□□□□ -1.66
PTCH1-211ENST00000488809 TRAV1-2A0A0B4J238 106 aa4.71□□□□□ -1.66
PTCH1-211ENST00000488809 A0A1W2PS18 150 aa4.71□□□□□ -1.66
PTCH1-211ENST00000488809 MARCH11A6NNE9 402 aa4.71□□□□□ -1.66
PTCH1-211ENST00000488809 K7EIM0 57 aa4.71□□□□□ -1.66
PTCH1-211ENST00000488809 SULT1C2O00338 296 aa4.71□□□□□ -1.66
PTCH1-211ENST00000488809 SCGB2A1O75556 95 aa4.71□□□□□ -1.66
PTCH1-211ENST00000488809 CDK2AP2O75956 126 aa4.71□□□□□ -1.66
PTCH1-211ENST00000488809 PPYP01298 95 aa4.71□□□□□ -1.66
PTCH1-211ENST00000488809 CTSGP08311 255 aa4.71□□□□□ -1.66
PTCH1-211ENST00000488809 RAB3BP20337 219 aa4.71□□□□□ -1.66
PTCH1-211ENST00000488809 FCGR2CP31995 323 aa4.71□□□□□ -1.66
PTCH1-211ENST00000488809 EIF2B2P49770 351 aaKnown RBP4.71□□□□□ -1.66
PTCH1-211ENST00000488809 BRWD1-AS2P59051 145 aa4.71□□□□□ -1.66
PTCH1-211ENST00000488809 NUTF2P61970 127 aaKnown RBP4.71□□□□□ -1.66
PTCH1-211ENST00000488809 FABP5Q01469 135 aa4.71□□□□□ -1.66
PTCH1-211ENST00000488809 AADACL3Q5VUY0 350 aa4.71□□□□□ -1.66
PTCH1-211ENST00000488809 ZNF575Q86XF7 245 aa4.71□□□□□ -1.66
PTCH1-211ENST00000488809 OR1P1Q8NH06 330 aa4.71□□□□□ -1.66
PTCH1-211ENST00000488809 SLC25A46Q96AG3 418 aa4.71□□□□□ -1.66
PTCH1-211ENST00000488809 NARS2Q96I59 477 aaKnown RBP4.71□□□□□ -1.66
PTCH1-211ENST00000488809 FAM210BQ96KR6 192 aa4.71□□□□□ -1.66
PTCH1-211ENST00000488809 TSC22D3Q99576 134 aa4.71□□□□□ -1.66
PTCH1-211ENST00000488809 SLC5A7Q9GZV3 580 aa4.71□□□□□ -1.66
PTCH1-211ENST00000488809 NXF2Q9GZY0 626 aaKnown RBP4.71□□□□□ -1.66
PTCH1-211ENST00000488809 CCL28Q9NRJ3 127 aa4.71□□□□□ -1.66
PTCH1-211ENST00000488809 NDUFA4L2Q9NRX3 87 aa4.71□□□□□ -1.66
PTCH1-211ENST00000488809 RABAC1Q9UI14 185 aa4.71□□□□□ -1.66
PTCH1-211ENST00000488809 TPRKBQ9Y3C4 175 aa4.71□□□□□ -1.66
PTCH1-211ENST00000488809 OR51B2Q9Y5P1 312 aa4.71□□□□□ -1.66
PTCH1-211ENST00000488809 NACAE9PAV3 2078 aa4.71□□□□□ -1.66
PTCH1-211ENST00000488809 IGLV2-18A0A075B6J9 118 aa4.7□□□□□ -1.66
PTCH1-211ENST00000488809 IGHV3OR16-13A0A075B7E8 117 aa4.7□□□□□ -1.66
PTCH1-211ENST00000488809 ELOA3CA0A087WX78 387 aaPredicted RBP4.7□□□□□ -1.66
PTCH1-211ENST00000488809 IGHV3-74A0A0B4J1X5 117 aa4.7□□□□□ -1.66
PTCH1-211ENST00000488809 TRAV3A0A0B4J244 114 aa4.7□□□□□ -1.66
PTCH1-211ENST00000488809 TEX50A0A1B0GTY4 177 aa4.7□□□□□ -1.66
PTCH1-211ENST00000488809 TEX48A0A1B0GUV7 120 aa4.7□□□□□ -1.66
PTCH1-211ENST00000488809 TMEM189A5PLL7 270 aa4.7□□□□□ -1.66
PTCH1-211ENST00000488809 TMEM235A6NFC5 223 aa4.7□□□□□ -1.66
PTCH1-211ENST00000488809 C16orf90A8MZG2 172 aa4.7□□□□□ -1.66
PTCH1-211ENST00000488809 F8W735 103 aaPredicted RBP4.7□□□□□ -1.66
PTCH1-211ENST00000488809 GNAO1P09471 354 aa4.7□□□□□ -1.66
PTCH1-211ENST00000488809 NPBWR1P48145 328 aa4.7□□□□□ -1.66
PTCH1-211ENST00000488809 OR10A3P58181 314 aa4.7□□□□□ -1.66
PTCH1-211ENST00000488809 HERV-K104P61576 105 aa4.7□□□□□ -1.66
PTCH1-211ENST00000488809 RNF212Q495C1 297 aa4.7□□□□□ -1.66
PTCH1-211ENST00000488809 KCTD21Q4G0X4 260 aa4.7□□□□□ -1.66
PTCH1-211ENST00000488809 C1orf134Q5TEV5 83 aa4.7□□□□□ -1.66
PTCH1-211ENST00000488809 LAIR2Q6ISS4 152 aa4.7□□□□□ -1.66
PTCH1-211ENST00000488809 ZNF600Q6ZNG1 722 aa4.7□□□□□ -1.66
PTCH1-211ENST00000488809 Q6ZRM9 215 aa4.7□□□□□ -1.66
PTCH1-211ENST00000488809 TRPT1Q86TN4 253 aaKnown RBP4.7□□□□□ -1.66
PTCH1-211ENST00000488809 CADM3Q8N126 398 aa4.7□□□□□ -1.66
PTCH1-211ENST00000488809 MAPKAPK5-AS1Q8N8E1 139 aa4.7□□□□□ -1.66
PTCH1-211ENST00000488809 BEST4Q8NFU0 473 aa4.7□□□□□ -1.66
PTCH1-211ENST00000488809 OR51H1Q8NH63 302 aa4.7□□□□□ -1.66
PTCH1-211ENST00000488809 NUDCD2Q8WVJ2 157 aa4.7□□□□□ -1.66
PTCH1-211ENST00000488809 ST8SIA2Q92186 375 aa4.7□□□□□ -1.66
PTCH1-211ENST00000488809 MISP3Q96FF7 219 aa4.7□□□□□ -1.66
PTCH1-211ENST00000488809 GRAMD2BQ96HH9 432 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms