RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 CASQ1P31415 396 aa0.57□□□□□ -2.32
CCDC66-221ENST00000487739 ZNF80P51504 273 aaPredicted RBP0.57□□□□□ -2.32
CCDC66-221ENST00000487739 TCL1AP56279 114 aa0.57□□□□□ -2.32
CCDC66-221ENST00000487739 CAV1Q03135 178 aa0.57□□□□□ -2.32
CCDC66-221ENST00000487739 SYPL2Q5VXT5 272 aa0.57□□□□□ -2.32
CCDC66-221ENST00000487739 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.57□□□□□ -2.32
CCDC66-221ENST00000487739 WFDC11Q8NEX6 87 aa0.57□□□□□ -2.32
CCDC66-221ENST00000487739 GPR32P1Q8NGA4 272 aa0.57□□□□□ -2.32
CCDC66-221ENST00000487739 SERPINI1Q99574 410 aa0.57□□□□□ -2.32
CCDC66-221ENST00000487739 ATP6V1DQ9Y5K8 247 aa0.57□□□□□ -2.32
CCDC66-221ENST00000487739 ECM29Q5VYK3 1845 aa0.57□□□□□ -2.32
CCDC66-221ENST00000487739 FBN2P35556 2912 aa0.56□□□□□ -2.32
CCDC66-221ENST00000487739 IGKV1D-42A0A075B6H8 117 aa0.56□□□□□ -2.32
CCDC66-221ENST00000487739 LRRN3E7EW58 273 aa0.56□□□□□ -2.32
CCDC66-221ENST00000487739 GEMIN2O14893 280 aaKnown RBP0.56□□□□□ -2.32
CCDC66-221ENST00000487739 C1QAP02745 245 aa0.56□□□□□ -2.32
CCDC66-221ENST00000487739 METTL15P1P0C7V9 234 aa0.56□□□□□ -2.32
CCDC66-221ENST00000487739 DMTNQ08495 405 aa0.56□□□□□ -2.32
CCDC66-221ENST00000487739 GRK1Q15835 563 aa0.56□□□□□ -2.32
CCDC66-221ENST00000487739 OGFRL1Q5TC84 451 aaPredicted RBP0.56□□□□□ -2.32
CCDC66-221ENST00000487739 AADACL3Q5VUY0 350 aa0.56□□□□□ -2.32
CCDC66-221ENST00000487739 LCN15Q6UWW0 184 aa0.56□□□□□ -2.32
CCDC66-221ENST00000487739 AAED1Q7RTV5 226 aa0.56□□□□□ -2.32
CCDC66-221ENST00000487739 AQP3Q92482 292 aa0.56□□□□□ -2.32
CCDC66-221ENST00000487739 WDR61Q9GZS3 305 aaKnown RBP0.56□□□□□ -2.32
CCDC66-221ENST00000487739 CMTM6Q9NX76 183 aa0.56□□□□□ -2.32
CCDC66-221ENST00000487739 TP73-AS1Q9UF72 201 aa0.56□□□□□ -2.32
CCDC66-221ENST00000487739 SNURFQ9Y675 71 aa0.56□□□□□ -2.32
CCDC66-221ENST00000487739 PIK3R4Q99570 1358 aa0.56□□□□□ -2.32
CCDC66-221ENST00000487739 DCCP43146 1447 aa0.55□□□□□ -2.32
CCDC66-221ENST00000487739 EIF4G1Q04637 1599 aaKnown RBP0.55□□□□□ -2.32
CCDC66-221ENST00000487739 IGKV1-9A0A0C4DH69 117 aa0.55□□□□□ -2.32
CCDC66-221ENST00000487739 SLC16A4O15374 487 aa0.55□□□□□ -2.32
CCDC66-221ENST00000487739 CRYGAP11844 174 aa0.55□□□□□ -2.32
CCDC66-221ENST00000487739 FKBP2P26885 142 aaKnown RBP0.55□□□□□ -2.32
CCDC66-221ENST00000487739 UBE2IP63279 158 aaKnown RBP0.55□□□□□ -2.32
CCDC66-221ENST00000487739 TPM4P67936 248 aa0.55□□□□□ -2.32
CCDC66-221ENST00000487739 CCL20P78556 96 aa0.55□□□□□ -2.32
CCDC66-221ENST00000487739 CDK10Q15131 360 aa0.55□□□□□ -2.32
CCDC66-221ENST00000487739 IBA57Q5T440 356 aaKnown RBP0.55□□□□□ -2.32
CCDC66-221ENST00000487739 TEX36Q5VZQ5 186 aa0.55□□□□□ -2.32
CCDC66-221ENST00000487739 CD200R1LQ6Q8B3 271 aa0.55□□□□□ -2.32
CCDC66-221ENST00000487739 ALKAL1Q6UXT8 129 aa0.55□□□□□ -2.32
CCDC66-221ENST00000487739 Q6ZS49 121 aa0.55□□□□□ -2.32
CCDC66-221ENST00000487739 C12orf29Q8N999 325 aa0.55□□□□□ -2.32
CCDC66-221ENST00000487739 C11orf40Q8WZ69 217 aa0.55□□□□□ -2.32
CCDC66-221ENST00000487739 TMEM106AQ96A25 262 aa0.55□□□□□ -2.32
CCDC66-221ENST00000487739 DERL1Q9BUN8 251 aa0.55□□□□□ -2.32
CCDC66-221ENST00000487739 TRABDQ9H4I3 376 aa0.55□□□□□ -2.32
CCDC66-221ENST00000487739 TNRC6AQ8NDV7 1962 aaKnown RBP0.55□□□□□ -2.32
CCDC66-221ENST00000487739 ZNF106Q9H2Y7 1883 aaKnown RBP0.54□□□□□ -2.32
CCDC66-221ENST00000487739 EML5Q05BV3 1969 aa0.54□□□□□ -2.32
CCDC66-221ENST00000487739 CETN3O15182 167 aa0.54□□□□□ -2.32
CCDC66-221ENST00000487739 IGKV1-5P01602 117 aa0.54□□□□□ -2.32
CCDC66-221ENST00000487739 SPI1P17947 270 aa0.54□□□□□ -2.32
CCDC66-221ENST00000487739 AP2S1P53680 142 aaPredicted RBP0.54□□□□□ -2.32
CCDC66-221ENST00000487739 PMAIP1Q13794 54 aa0.54□□□□□ -2.32
CCDC66-221ENST00000487739 DEFB115Q30KQ5 88 aa0.54□□□□□ -2.32
CCDC66-221ENST00000487739 CDKL4Q5MAI5 379 aa0.54□□□□□ -2.32
CCDC66-221ENST00000487739 LPCAT4Q643R3 524 aa0.54□□□□□ -2.32
CCDC66-221ENST00000487739 BPIFA4PQ86YQ2 179 aa0.54□□□□□ -2.32
CCDC66-221ENST00000487739 FAM19A2Q8N3H0 131 aa0.54□□□□□ -2.32
CCDC66-221ENST00000487739 RASSF5Q8WWW0 418 aa0.54□□□□□ -2.32
CCDC66-221ENST00000487739 SLC50A1Q9BRV3 221 aa0.54□□□□□ -2.32
CCDC66-221ENST00000487739 NKIRAS1Q9NYS0 192 aa0.54□□□□□ -2.32
CCDC66-221ENST00000487739 USE1Q9NZ43 259 aa0.54□□□□□ -2.32
CCDC66-221ENST00000487739 OR5AC2Q9NZP5 309 aa0.54□□□□□ -2.32
CCDC66-221ENST00000487739 PLXND1Q9Y4D7 1925 aa0.54□□□□□ -2.32
CCDC66-221ENST00000487739 ZNF469Q96JG9 3925 aaPredicted RBP0.53□□□□□ -2.32
CCDC66-221ENST00000487739 LAMA4Q16363 1823 aa0.53□□□□□ -2.32
CCDC66-221ENST00000487739 TGIF2-C20orf24A0A0A6YYL0 155 aa0.53□□□□□ -2.32
CCDC66-221ENST00000487739 EEF1E1-BLOC1S5C9J1V9 151 aa0.53□□□□□ -2.32
CCDC66-221ENST00000487739 FADS1O60427 444 aa0.53□□□□□ -2.32
CCDC66-221ENST00000487739 OR5F1O95221 314 aa0.53□□□□□ -2.32
CCDC66-221ENST00000487739 ISG15P05161 165 aa0.53□□□□□ -2.32
CCDC66-221ENST00000487739 HIST1H2BOP23527 126 aa0.53□□□□□ -2.32
CCDC66-221ENST00000487739 HIST1H2BBP33778 126 aa0.53□□□□□ -2.32
CCDC66-221ENST00000487739 HIST1H2BDP58876 126 aa0.53□□□□□ -2.32
CCDC66-221ENST00000487739 RAB5BP61020 215 aa0.53□□□□□ -2.32
CCDC66-221ENST00000487739 HIST1H2BCP62807 126 aa0.53□□□□□ -2.32
CCDC66-221ENST00000487739 STX5Q13190 355 aa0.53□□□□□ -2.32
CCDC66-221ENST00000487739 COTL1Q14019 142 aa0.53□□□□□ -2.32
CCDC66-221ENST00000487739 HIST2H2BEQ16778 126 aa0.53□□□□□ -2.32
CCDC66-221ENST00000487739 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.53□□□□□ -2.32
CCDC66-221ENST00000487739 Q6ZQT0 140 aa0.53□□□□□ -2.32
CCDC66-221ENST00000487739 ZNF826PQ6ZT77 177 aa0.53□□□□□ -2.32
CCDC66-221ENST00000487739 CLVS1Q8IUQ0 354 aaPredicted RBP0.53□□□□□ -2.32
CCDC66-221ENST00000487739 IQCF2Q8IXL9 164 aa0.53□□□□□ -2.32
CCDC66-221ENST00000487739 OR4C6Q8NH72 309 aa0.53□□□□□ -2.32
CCDC66-221ENST00000487739 PFN4Q8NHR9 129 aa0.53□□□□□ -2.32
CCDC66-221ENST00000487739 MRPL30Q8TCC3 161 aaKnown RBP0.53□□□□□ -2.32
CCDC66-221ENST00000487739 DDI1Q8WTU0 396 aa0.53□□□□□ -2.32
CCDC66-221ENST00000487739 HIST1H2BHQ93079 126 aa0.53□□□□□ -2.32
CCDC66-221ENST00000487739 OBSCN-AS1Q96MR7 158 aa0.53□□□□□ -2.32
CCDC66-221ENST00000487739 HIST1H2BNQ99877 126 aa0.53□□□□□ -2.32
CCDC66-221ENST00000487739 HIST1H2BMQ99879 126 aa0.53□□□□□ -2.32
CCDC66-221ENST00000487739 TOPBP1Q92547 1522 aa0.53□□□□□ -2.33
CCDC66-221ENST00000487739 HECW2Q9P2P5 1572 aa0.53□□□□□ -2.33
CCDC66-221ENST00000487739 TRBV6-7A0A0A0MS04 114 aa0.52□□□□□ -2.33
CCDC66-221ENST00000487739 A0A1B0GV50 99 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms