RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 C8orf88P0DMB2 117 aa9.34□□□□□ -0.91
SREBF1-215ENST00000487401 WT1-ASQ06250 92 aa9.34□□□□□ -0.91
SREBF1-215ENST00000487401 PHLDA2Q53GA4 152 aa9.34□□□□□ -0.91
SREBF1-215ENST00000487401 SLC38A6Q8IZM9 456 aa9.34□□□□□ -0.91
SREBF1-215ENST00000487401 CADM3Q8N126 398 aa9.34□□□□□ -0.91
SREBF1-215ENST00000487401 OR1L6Q8NGR2 347 aa9.34□□□□□ -0.91
SREBF1-215ENST00000487401 DYNC2LI1Q8TCX1 351 aa9.34□□□□□ -0.91
SREBF1-215ENST00000487401 GPX8Q8TED1 209 aa9.34□□□□□ -0.91
SREBF1-215ENST00000487401 TMEM56Q96MV1 263 aa9.34□□□□□ -0.91
SREBF1-215ENST00000487401 FXYD6Q9H0Q3 95 aa9.34□□□□□ -0.91
SREBF1-215ENST00000487401 SCPEP1Q9HB40 452 aa9.34□□□□□ -0.91
SREBF1-215ENST00000487401 F11RQ9Y624 299 aaKnown RBP9.34□□□□□ -0.91
SREBF1-215ENST00000487401 DNAH1Q9P2D7 4330 aa9.33□□□□□ -0.92
SREBF1-215ENST00000487401 LOC102724200A0A096LPH7 203 aaPredicted RBP9.33□□□□□ -0.92
SREBF1-215ENST00000487401 IGHV3-21A0A0B4J1V1 117 aa9.33□□□□□ -0.92
SREBF1-215ENST00000487401 APOA1P02647 267 aa9.33□□□□□ -0.92
SREBF1-215ENST00000487401 EIF4EP06730 217 aaKnown RBP9.33□□□□□ -0.92
SREBF1-215ENST00000487401 NCS1P62166 190 aa9.33□□□□□ -0.92
SREBF1-215ENST00000487401 LAMTOR1Q6IAA8 161 aa9.33□□□□□ -0.92
SREBF1-215ENST00000487401 SPSB3Q6PJ21 355 aa9.33□□□□□ -0.92
SREBF1-215ENST00000487401 SNX29P2Q8IUI4 249 aa9.33□□□□□ -0.92
SREBF1-215ENST00000487401 CENPSQ8N2Z9 138 aa9.33□□□□□ -0.92
SREBF1-215ENST00000487401 OR2C3Q8N628 320 aa9.33□□□□□ -0.92
SREBF1-215ENST00000487401 BSCL2Q96G97 398 aaPredicted RBP9.33□□□□□ -0.92
SREBF1-215ENST00000487401 CMTM3Q96MX0 182 aa9.33□□□□□ -0.92
SREBF1-215ENST00000487401 GGTLC1Q9BX51 225 aa9.33□□□□□ -0.92
SREBF1-215ENST00000487401 ZNF436Q9C0F3 470 aaPredicted RBP9.33□□□□□ -0.92
SREBF1-215ENST00000487401 C5orf66Q9H5L9 145 aa9.33□□□□□ -0.92
SREBF1-215ENST00000487401 C21orf62Q9NYP8 219 aa9.33□□□□□ -0.92
SREBF1-215ENST00000487401 STARD9Q9P2P6 4700 aa9.33□□□□□ -0.92
SREBF1-215ENST00000487401 TENM2Q9NT68 2774 aa9.33□□□□□ -0.92
SREBF1-215ENST00000487401 RCVRNP35243 200 aa9.32□□□□□ -0.92
SREBF1-215ENST00000487401 RGS21Q2M5E4 152 aa9.32□□□□□ -0.92
SREBF1-215ENST00000487401 Q56UQ5 140 aa9.32□□□□□ -0.92
SREBF1-215ENST00000487401 TBC1D26Q86UD7 250 aa9.32□□□□□ -0.92
SREBF1-215ENST00000487401 UBAC2Q8NBM4 344 aa9.32□□□□□ -0.92
SREBF1-215ENST00000487401 OR5B3Q8NH48 314 aa9.32□□□□□ -0.92
SREBF1-215ENST00000487401 OR4A16Q8NH70 328 aa9.32□□□□□ -0.92
SREBF1-215ENST00000487401 TMEM190Q8WZ59 177 aa9.32□□□□□ -0.92
SREBF1-215ENST00000487401 ATP6V0BQ99437 205 aa9.32□□□□□ -0.92
SREBF1-215ENST00000487401 C20orf24Q9BUV8 137 aa9.32□□□□□ -0.92
SREBF1-215ENST00000487401 FAM25AB3EWG3 89 aa9.31□□□□□ -0.92
SREBF1-215ENST00000487401 FAM25CB3EWG5 89 aa9.31□□□□□ -0.92
SREBF1-215ENST00000487401 FAM25GB3EWG6 89 aa9.31□□□□□ -0.92
SREBF1-215ENST00000487401 NDUFA4O00483 81 aa9.31□□□□□ -0.92
SREBF1-215ENST00000487401 RORCP51449 518 aa9.31□□□□□ -0.92
SREBF1-215ENST00000487401 MFAP2P55001 183 aa9.31□□□□□ -0.92
SREBF1-215ENST00000487401 VBP1P61758 197 aa9.31□□□□□ -0.92
SREBF1-215ENST00000487401 MZT2AQ6P582 158 aa9.31□□□□□ -0.92
SREBF1-215ENST00000487401 H2BFWTQ7Z2G1 175 aa9.31□□□□□ -0.92
SREBF1-215ENST00000487401 SCARB1Q8WTV0 552 aa9.31□□□□□ -0.92
SREBF1-215ENST00000487401 SPAG8Q99932 426 aaPredicted RBP9.31□□□□□ -0.92
SREBF1-215ENST00000487401 CHRDL1Q9BU40 450 aa9.31□□□□□ -0.92
SREBF1-215ENST00000487401 DAZ1Q9NQZ3 744 aaKnown RBP9.31□□□□□ -0.92
SREBF1-215ENST00000487401 FAM212BQ9NTI7 297 aaPredicted RBP9.31□□□□□ -0.92
SREBF1-215ENST00000487401 C15orf61A6NNL5 157 aa9.3□□□□□ -0.92
SREBF1-215ENST00000487401 K7EIM0 57 aa9.3□□□□□ -0.92
SREBF1-215ENST00000487401 HPGDSO60760 199 aa9.3□□□□□ -0.92
SREBF1-215ENST00000487401 JTBO76095 146 aa9.3□□□□□ -0.92
SREBF1-215ENST00000487401 ELK1P19419 428 aa9.3□□□□□ -0.92
SREBF1-215ENST00000487401 UCP3P55916 312 aa9.3□□□□□ -0.92
SREBF1-215ENST00000487401 OR1P1Q8NH06 330 aa9.3□□□□□ -0.92
SREBF1-215ENST00000487401 MISP3Q96FF7 219 aa9.3□□□□□ -0.92
SREBF1-215ENST00000487401 LYSTQ99698 3801 aa9.3□□□□□ -0.92
SREBF1-215ENST00000487401 SLIRPQ9GZT3 109 aaKnown RBP9.3□□□□□ -0.92
SREBF1-215ENST00000487401 TMEM14BQ9NUH8 114 aa9.3□□□□□ -0.92
SREBF1-215ENST00000487401 IGHV3OR16-8A0A075B7F1 116 aa9.29□□□□□ -0.92
SREBF1-215ENST00000487401 DBX1A6NMT0 343 aa9.29□□□□□ -0.92
SREBF1-215ENST00000487401 K7EMT4 169 aa9.29□□□□□ -0.92
SREBF1-215ENST00000487401 M0QYG6 137 aa9.29□□□□□ -0.92
SREBF1-215ENST00000487401 TSPAN4O14817 238 aa9.29□□□□□ -0.92
SREBF1-215ENST00000487401 NUPL2O15504 423 aaKnown RBP9.29□□□□□ -0.92
SREBF1-215ENST00000487401 ZNF207O43670 478 aaKnown RBP9.29□□□□□ -0.92
SREBF1-215ENST00000487401 YIF1AO95070 293 aa9.29□□□□□ -0.92
SREBF1-215ENST00000487401 PGAM2P15259 253 aa9.29□□□□□ -0.92
SREBF1-215ENST00000487401 APOC4P55056 127 aa9.29□□□□□ -0.92
SREBF1-215ENST00000487401 MFAP4P55083 255 aa9.29□□□□□ -0.92
SREBF1-215ENST00000487401 RELQ04864 619 aaPredicted RBP9.29□□□□□ -0.92
SREBF1-215ENST00000487401 MCFD2Q8NI22 146 aa9.29□□□□□ -0.92
SREBF1-215ENST00000487401 AP3S1Q92572 193 aa9.29□□□□□ -0.92
SREBF1-215ENST00000487401 SEC22AQ96IW7 307 aa9.29□□□□□ -0.92
SREBF1-215ENST00000487401 NXF2Q9GZY0 626 aaKnown RBP9.29□□□□□ -0.92
SREBF1-215ENST00000487401 UBQLN2Q9UHD9 624 aa9.29□□□□□ -0.92
SREBF1-215ENST00000487401 CSMD3Q7Z407 3707 aa9.29□□□□□ -0.92
SREBF1-215ENST00000487401 TNCP24821 2201 aa9.28□□□□□ -0.92
SREBF1-215ENST00000487401 OR4C46A6NHA9 309 aa9.28□□□□□ -0.92
SREBF1-215ENST00000487401 C15orf62A8K5M9 175 aa9.28□□□□□ -0.92
SREBF1-215ENST00000487401 ADMP35318 185 aa9.28□□□□□ -0.92
SREBF1-215ENST00000487401 BCAP31P51572 246 aa9.28□□□□□ -0.92
SREBF1-215ENST00000487401 PPP5CP53041 499 aa9.28□□□□□ -0.92
SREBF1-215ENST00000487401 HSPE1P61604 102 aaKnown RBP9.28□□□□□ -0.92
SREBF1-215ENST00000487401 ERHP84090 104 aaKnown RBP9.28□□□□□ -0.92
SREBF1-215ENST00000487401 OXA1LQ15070 435 aa9.28□□□□□ -0.92
SREBF1-215ENST00000487401 TRIM16LQ309B1 348 aa9.28□□□□□ -0.92
SREBF1-215ENST00000487401 RNASE12Q5GAN4 147 aaKnown RBP9.28□□□□□ -0.92
SREBF1-215ENST00000487401 MRGPRFQ96AM1 343 aa9.28□□□□□ -0.92
SREBF1-215ENST00000487401 TXN2Q99757 166 aa9.28□□□□□ -0.92
SREBF1-215ENST00000487401 OVOL2Q9BRP0 275 aa9.28□□□□□ -0.92
SREBF1-215ENST00000487401 CCDC59Q9P031 241 aaKnown RBP9.28□□□□□ -0.92
SREBF1-215ENST00000487401 F8W735 103 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms