RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 MIR17HGQ75NE6 70 aa12.35□□□□□ -0.43
EPHB4-206ENST00000487222 RPP21Q9H633 154 aaKnown RBP12.35□□□□□ -0.43
EPHB4-206ENST00000487222 LTBP1Q14766 1721 aa12.35□□□□□ -0.43
EPHB4-206ENST00000487222 HEATR5BQ9P2D3 2071 aa12.35□□□□□ -0.43
EPHB4-206ENST00000487222 LINC00587B1AMM8 73 aa12.35□□□□□ -0.43
EPHB4-206ENST00000487222 IGHV1-2P23083 117 aa12.35□□□□□ -0.43
EPHB4-206ENST00000487222 FAM27E3Q08E93 113 aa12.35□□□□□ -0.43
EPHB4-206ENST00000487222 PRSS8Q16651 343 aa12.35□□□□□ -0.43
EPHB4-206ENST00000487222 FAM201AQ5SY85 155 aa12.35□□□□□ -0.43
EPHB4-206ENST00000487222 FMC1Q96HJ9 113 aa12.35□□□□□ -0.43
EPHB4-206ENST00000487222 PIMREGQ9BSJ6 248 aa12.35□□□□□ -0.43
EPHB4-206ENST00000487222 ZNF319Q9P2F9 582 aa12.35□□□□□ -0.43
EPHB4-206ENST00000487222 A0A1B0GW15 77 aa12.35□□□□□ -0.43
EPHB4-206ENST00000487222 RRN3P1Q2M238 152 aa12.35□□□□□ -0.43
EPHB4-206ENST00000487222 RAX2Q96IS3 184 aa12.35□□□□□ -0.43
EPHB4-206ENST00000487222 UBE2L6O14933 153 aa12.35□□□□□ -0.43
EPHB4-206ENST00000487222 HIST1H1AQ02539 215 aaPredicted RBP12.35□□□□□ -0.43
EPHB4-206ENST00000487222 CIRBPQ14011 172 aaKnown RBP12.35□□□□□ -0.43
EPHB4-206ENST00000487222 Q6AWC8 147 aa12.35□□□□□ -0.43
EPHB4-206ENST00000487222 FOXD3Q9UJU5 478 aaPredicted RBP12.35□□□□□ -0.43
EPHB4-206ENST00000487222 FOXH1O75593 365 aa12.34□□□□□ -0.43
EPHB4-206ENST00000487222 LINC00312Q9Y6C7 94 aa12.34□□□□□ -0.43
EPHB4-206ENST00000487222 DICER1Q9UPY3 1922 aaKnown RBP12.34□□□□□ -0.43
EPHB4-206ENST00000487222 IZUMO1RA6ND01 250 aa12.34□□□□□ -0.43
EPHB4-206ENST00000487222 FAM159AQ6UWV7 190 aa12.34□□□□□ -0.43
EPHB4-206ENST00000487222 TMEM170AQ8WVE7 144 aa12.34□□□□□ -0.43
EPHB4-206ENST00000487222 MDC1Q14676 2089 aaKnown RBP12.34□□□□□ -0.43
EPHB4-206ENST00000487222 YPEL1O60688 119 aa12.34□□□□□ -0.43
EPHB4-206ENST00000487222 ZNF600Q6ZNG1 722 aa12.34□□□□□ -0.43
EPHB4-206ENST00000487222 COPS9Q8WXC6 57 aa12.34□□□□□ -0.43
EPHB4-206ENST00000487222 C14orf144Q96I85 54 aa12.34□□□□□ -0.43
EPHB4-206ENST00000487222 YPEL2Q96QA6 119 aa12.34□□□□□ -0.43
EPHB4-206ENST00000487222 TRAV24A0A0B4J272 114 aa12.34□□□□□ -0.43
EPHB4-206ENST00000487222 APOHP02749 345 aaPredicted RBP12.34□□□□□ -0.43
EPHB4-206ENST00000487222 SMIM13P0DJ93 91 aa12.34□□□□□ -0.43
EPHB4-206ENST00000487222 CCL20P78556 96 aa12.34□□□□□ -0.43
EPHB4-206ENST00000487222 PSMG4Q5JS54 123 aa12.34□□□□□ -0.43
EPHB4-206ENST00000487222 MRPL20Q9BYC9 149 aaKnown RBP12.34□□□□□ -0.43
EPHB4-206ENST00000487222 PRDM13Q9H4Q3 707 aa12.34□□□□□ -0.43
EPHB4-206ENST00000487222 MTCL1Q9Y4B5 1905 aaKnown RBP12.34□□□□□ -0.43
EPHB4-206ENST00000487222 CIARTQ8N365 385 aaPredicted RBP12.33□□□□□ -0.44
EPHB4-206ENST00000487222 TEX29Q8N6K0 151 aa12.33□□□□□ -0.44
EPHB4-206ENST00000487222 AKAP6Q13023 2319 aa12.33□□□□□ -0.44
EPHB4-206ENST00000487222 LHX2P50458 406 aa12.33□□□□□ -0.44
EPHB4-206ENST00000487222 KIF26BQ2KJY2 2108 aa12.33□□□□□ -0.44
EPHB4-206ENST00000487222 A0A0A6YYD4 124 aa12.33□□□□□ -0.44
EPHB4-206ENST00000487222 ZNF56Q15929 161 aa12.33□□□□□ -0.44
EPHB4-206ENST00000487222 FAM74A4Q5TZK3 123 aa12.33□□□□□ -0.44
EPHB4-206ENST00000487222 ZNF324BQ6AW86 544 aaPredicted RBP12.33□□□□□ -0.44
EPHB4-206ENST00000487222 WDR82Q6UXN9 313 aa12.33□□□□□ -0.44
EPHB4-206ENST00000487222 C21orf62Q9NYP8 219 aa12.33□□□□□ -0.44
EPHB4-206ENST00000487222 ACACAQ13085 2346 aa12.33□□□□□ -0.44
EPHB4-206ENST00000487222 LY6EQ16553 131 aa12.33□□□□□ -0.44
EPHB4-206ENST00000487222 ZNF497Q6ZNH5 498 aa12.33□□□□□ -0.44
EPHB4-206ENST00000487222 ARL6IP6Q8N6S5 226 aa12.33□□□□□ -0.44
EPHB4-206ENST00000487222 FOXA2Q9Y261 457 aaPredicted RBP12.33□□□□□ -0.44
EPHB4-206ENST00000487222 SNRPD3P62318 126 aaKnown RBP12.32□□□□□ -0.44
EPHB4-206ENST00000487222 RTN4RL2Q86UN3 420 aa12.32□□□□□ -0.44
EPHB4-206ENST00000487222 TMEM160Q9NX00 188 aa12.32□□□□□ -0.44
EPHB4-206ENST00000487222 DOCK6Q96HP0 2047 aa12.32□□□□□ -0.44
EPHB4-206ENST00000487222 PDCD11Q14690 1871 aaKnown RBP12.32□□□□□ -0.44
EPHB4-206ENST00000487222 UPK2O00526 184 aa12.32□□□□□ -0.44
EPHB4-206ENST00000487222 ATP5LO75964 103 aa12.32□□□□□ -0.44
EPHB4-206ENST00000487222 PPP1R17O96001 155 aa12.32□□□□□ -0.44
EPHB4-206ENST00000487222 CELA3BP08861 270 aa12.32□□□□□ -0.44
EPHB4-206ENST00000487222 CEACAM1P13688 526 aa12.32□□□□□ -0.44
EPHB4-206ENST00000487222 GATA2P23769 480 aaPredicted RBP12.32□□□□□ -0.44
EPHB4-206ENST00000487222 PCP4P48539 62 aa12.32□□□□□ -0.44
EPHB4-206ENST00000487222 IGKV1D-8A0A087WSZ0 117 aa12.32□□□□□ -0.44
EPHB4-206ENST00000487222 GLRX5Q86SX6 157 aa12.32□□□□□ -0.44
EPHB4-206ENST00000487222 GREB1Q4ZG55 1949 aa12.32□□□□□ -0.44
EPHB4-206ENST00000487222 IGHV3OR16-13A0A075B7E8 117 aa12.32□□□□□ -0.44
EPHB4-206ENST00000487222 IGHV3-74A0A0B4J1X5 117 aa12.32□□□□□ -0.44
EPHB4-206ENST00000487222 TRAV8-6A0A0B4J262 113 aa12.32□□□□□ -0.44
EPHB4-206ENST00000487222 TTC9CQ8N5M4 171 aa12.32□□□□□ -0.44
EPHB4-206ENST00000487222 COX6B1P14854 86 aa12.31□□□□□ -0.44
EPHB4-206ENST00000487222 MST1P26927 711 aa12.31□□□□□ -0.44
EPHB4-206ENST00000487222 PDLIM4P50479 330 aa12.31□□□□□ -0.44
EPHB4-206ENST00000487222 LHFPL1Q86WI0 220 aa12.31□□□□□ -0.44
EPHB4-206ENST00000487222 C18orf15Q96N68 181 aa12.31□□□□□ -0.44
EPHB4-206ENST00000487222 FBXL7Q9UJT9 491 aa12.31□□□□□ -0.44
EPHB4-206ENST00000487222 INTS1Q8N201 2190 aaKnown RBP12.31□□□□□ -0.44
EPHB4-206ENST00000487222 IGHV3OR16-12A0A075B7B8 117 aa12.31□□□□□ -0.44
EPHB4-206ENST00000487222 C15orf61A6NNL5 157 aa12.31□□□□□ -0.44
EPHB4-206ENST00000487222 SERF1AO75920 110 aa12.31□□□□□ -0.44
EPHB4-206ENST00000487222 LINC01560Q8TB33 94 aa12.31□□□□□ -0.44
EPHB4-206ENST00000487222 NEUROG1Q92886 237 aa12.31□□□□□ -0.44
EPHB4-206ENST00000487222 KLRB1Q12918 225 aa12.31□□□□□ -0.44
EPHB4-206ENST00000487222 MBD3L1Q8WWY6 194 aa12.31□□□□□ -0.44
EPHB4-206ENST00000487222 GEMIN7Q9H840 131 aaKnown RBP12.31□□□□□ -0.44
EPHB4-206ENST00000487222 C1QTNF9BB2RNN3 333 aa12.31□□□□□ -0.44
EPHB4-206ENST00000487222 SAA1P0DJI8 122 aaPredicted RBP12.31□□□□□ -0.44
EPHB4-206ENST00000487222 CHD5Q8TDI0 1954 aa12.31□□□□□ -0.44
EPHB4-206ENST00000487222 HIGD1CA8MV81 97 aa12.3□□□□□ -0.44
EPHB4-206ENST00000487222 CD5P06127 495 aa12.3□□□□□ -0.44
EPHB4-206ENST00000487222 C1QTNF9P0C862 333 aa12.3□□□□□ -0.44
EPHB4-206ENST00000487222 CRYGSP22914 178 aa12.3□□□□□ -0.44
EPHB4-206ENST00000487222 ATP5J2P56134 94 aa12.3□□□□□ -0.44
EPHB4-206ENST00000487222 FAM19A2Q8N3H0 131 aa12.3□□□□□ -0.44
EPHB4-206ENST00000487222 Q9H3A6 140 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms