RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 FAM122AQ96E09 287 aa10□□□□□ -0.81
COL3A1-206ENST00000487010 SLC35E1Q96K37 410 aa10□□□□□ -0.81
COL3A1-206ENST00000487010 IGHV1-18A0A0C4DH31 117 aa9.99□□□□□ -0.81
COL3A1-206ENST00000487010 SMIM27A0A1W2PRY6 76 aa9.99□□□□□ -0.81
COL3A1-206ENST00000487010 GGTLC3B5MD39 225 aa9.99□□□□□ -0.81
COL3A1-206ENST00000487010 BMPR1BO00238 502 aa9.99□□□□□ -0.81
COL3A1-206ENST00000487010 OR7C2O60412 319 aa9.99□□□□□ -0.81
COL3A1-206ENST00000487010 MMP23AO75900 390 aa9.99□□□□□ -0.81
COL3A1-206ENST00000487010 IGHG3P01860 377 aa9.99□□□□□ -0.81
COL3A1-206ENST00000487010 TCL1AP56279 114 aa9.99□□□□□ -0.81
COL3A1-206ENST00000487010 SUMO1P63165 101 aaKnown RBP9.99□□□□□ -0.81
COL3A1-206ENST00000487010 POU2AF1Q16633 256 aa9.99□□□□□ -0.81
COL3A1-206ENST00000487010 SPATA45Q537H7 98 aa9.99□□□□□ -0.81
COL3A1-206ENST00000487010 COL5A1-AS1Q5SY13 56 aa9.99□□□□□ -0.81
COL3A1-206ENST00000487010 RBM14Q96PK6 669 aaKnown RBP9.99□□□□□ -0.81
COL3A1-206ENST00000487010 PRNDQ9UKY0 176 aa9.99□□□□□ -0.81
COL3A1-206ENST00000487010 IGKV1OR2-108A0A075B7D4 117 aa9.98□□□□□ -0.81
COL3A1-206ENST00000487010 J3QR06 171 aa9.98□□□□□ -0.81
COL3A1-206ENST00000487010 ZNF324O75467 553 aaPredicted RBP9.98□□□□□ -0.81
COL3A1-206ENST00000487010 HLA-DQA1P01909 254 aa9.98□□□□□ -0.81
COL3A1-206ENST00000487010 REG1AP05451 166 aa9.98□□□□□ -0.81
COL3A1-206ENST00000487010 PMCHP20382 165 aa9.98□□□□□ -0.81
COL3A1-206ENST00000487010 SRIP30626 198 aa9.98□□□□□ -0.81
COL3A1-206ENST00000487010 PPOXP50336 477 aa9.98□□□□□ -0.81
COL3A1-206ENST00000487010 IBA57Q5T440 356 aaKnown RBP9.98□□□□□ -0.81
COL3A1-206ENST00000487010 MOB3BQ86TA1 216 aa9.98□□□□□ -0.81
COL3A1-206ENST00000487010 PNKDQ8N490 385 aa9.98□□□□□ -0.81
COL3A1-206ENST00000487010 C9orf106Q8NAJ2 232 aa9.98□□□□□ -0.81
COL3A1-206ENST00000487010 ADTRPQ96IZ2 230 aa9.98□□□□□ -0.81
COL3A1-206ENST00000487010 IGF2BP2-AS1Q96M15 143 aa9.98□□□□□ -0.81
COL3A1-206ENST00000487010 C19orf24Q9BVV8 132 aa9.98□□□□□ -0.81
COL3A1-206ENST00000487010 PLEKHA3Q9HB20 300 aa9.98□□□□□ -0.81
COL3A1-206ENST00000487010 CDC42EP3Q9UKI2 254 aa9.98□□□□□ -0.81
COL3A1-206ENST00000487010 PRR14LQ5THK1 2151 aa9.98□□□□□ -0.81
COL3A1-206ENST00000487010 A0A1W2PRE2 83 aa9.98□□□□□ -0.81
COL3A1-206ENST00000487010 LNP1A1A4G5 178 aa9.98□□□□□ -0.81
COL3A1-206ENST00000487010 GATA2P23769 480 aaPredicted RBP9.98□□□□□ -0.81
COL3A1-206ENST00000487010 TAS2R45P59539 299 aa9.98□□□□□ -0.81
COL3A1-206ENST00000487010 MRPS11P82912 194 aaKnown RBP9.98□□□□□ -0.81
COL3A1-206ENST00000487010 PRCDQ00LT1 54 aa9.98□□□□□ -0.81
COL3A1-206ENST00000487010 RELQ04864 619 aaPredicted RBP9.98□□□□□ -0.81
COL3A1-206ENST00000487010 RTL8BQ17RB0 113 aa9.98□□□□□ -0.81
COL3A1-206ENST00000487010 MSMPQ1L6U9 139 aa9.98□□□□□ -0.81
COL3A1-206ENST00000487010 SPRNQ5BIV9 151 aa9.98□□□□□ -0.81
COL3A1-206ENST00000487010 MRPL54Q6P161 138 aaKnown RBP9.98□□□□□ -0.81
COL3A1-206ENST00000487010 NCOR1P1Q9H4R4 102 aa9.98□□□□□ -0.81
COL3A1-206ENST00000487010 GCM1Q9NP62 436 aa9.98□□□□□ -0.81
COL3A1-206ENST00000487010 RAB9BQ9NP90 201 aa9.98□□□□□ -0.81
COL3A1-206ENST00000487010 ZNF257Q9Y2Q1 563 aa9.98□□□□□ -0.81
COL3A1-206ENST00000487010 KBTBD11-OT1A0A1B0GTJ5 212 aa9.97□□□□□ -0.81
COL3A1-206ENST00000487010 IZUMO1RA6ND01 250 aa9.97□□□□□ -0.81
COL3A1-206ENST00000487010 UPK2O00526 184 aa9.97□□□□□ -0.81
COL3A1-206ENST00000487010 MGST1P10620 155 aaKnown RBP9.97□□□□□ -0.81
COL3A1-206ENST00000487010 SFTPCP11686 197 aa9.97□□□□□ -0.81
COL3A1-206ENST00000487010 CD59P13987 128 aa9.97□□□□□ -0.81
COL3A1-206ENST00000487010 PRRX1P54821 245 aa9.97□□□□□ -0.81
COL3A1-206ENST00000487010 NIT1Q86X76 327 aa9.97□□□□□ -0.81
COL3A1-206ENST00000487010 LYG1Q8N1E2 194 aa9.97□□□□□ -0.81
COL3A1-206ENST00000487010 STARD4Q96DR4 205 aa9.97□□□□□ -0.81
COL3A1-206ENST00000487010 SERTAD4Q9NUC0 356 aa9.97□□□□□ -0.81
COL3A1-206ENST00000487010 DCAF16Q9NXF7 216 aa9.97□□□□□ -0.81
COL3A1-206ENST00000487010 UQCR10Q9UDW1 63 aa9.97□□□□□ -0.81
COL3A1-206ENST00000487010 LHBP01229 141 aa9.97□□□□□ -0.81
COL3A1-206ENST00000487010 APCSP02743 223 aa9.97□□□□□ -0.81
COL3A1-206ENST00000487010 C3orf79P0CE67 100 aa9.97□□□□□ -0.81
COL3A1-206ENST00000487010 IGLC2P0DOY2 106 aa9.97□□□□□ -0.81
COL3A1-206ENST00000487010 IGLC3P0DOY3 106 aa9.97□□□□□ -0.81
COL3A1-206ENST00000487010 TFPI2P48307 235 aa9.97□□□□□ -0.81
COL3A1-206ENST00000487010 MMDQ15546 238 aa9.97□□□□□ -0.81
COL3A1-206ENST00000487010 MOGAT3Q86VF5 341 aa9.97□□□□□ -0.81
COL3A1-206ENST00000487010 ZNF439Q8NDP4 499 aa9.97□□□□□ -0.81
COL3A1-206ENST00000487010 TSKUQ8WUA8 353 aa9.97□□□□□ -0.81
COL3A1-206ENST00000487010 OR2V2Q96R30 315 aa9.97□□□□□ -0.81
COL3A1-206ENST00000487010 SLC25A33Q9BSK2 321 aa9.97□□□□□ -0.81
COL3A1-206ENST00000487010 ZFP30Q9Y2G7 519 aa9.97□□□□□ -0.81
COL3A1-206ENST00000487010 HEATR1Q9H583 2144 aaKnown RBP9.96□□□□□ -0.81
COL3A1-206ENST00000487010 TEX50A0A1B0GTY4 177 aa9.96□□□□□ -0.81
COL3A1-206ENST00000487010 DPRXA6NFQ7 191 aa9.96□□□□□ -0.81
COL3A1-206ENST00000487010 HYPMO75409 117 aa9.96□□□□□ -0.81
COL3A1-206ENST00000487010 C8orf88P0DMB2 117 aa9.96□□□□□ -0.81
COL3A1-206ENST00000487010 ATP5IP56385 69 aaPredicted RBP9.96□□□□□ -0.81
COL3A1-206ENST00000487010 C2orf83Q53S99 150 aa9.96□□□□□ -0.81
COL3A1-206ENST00000487010 C19orf35Q6ZS72 473 aa9.96□□□□□ -0.81
COL3A1-206ENST00000487010 PLSCR4Q9NRQ2 329 aa9.96□□□□□ -0.81
COL3A1-206ENST00000487010 DSCAML1Q8TD84 2053 aa9.96□□□□□ -0.82
COL3A1-206ENST00000487010 TNRC18O15417 2968 aaPredicted RBP9.95□□□□□ -0.82
COL3A1-206ENST00000487010 USF1P22415 310 aaPredicted RBP9.95□□□□□ -0.82
COL3A1-206ENST00000487010 MLANAQ16655 118 aa9.95□□□□□ -0.82
COL3A1-206ENST00000487010 DHRS13Q6UX07 377 aa9.95□□□□□ -0.82
COL3A1-206ENST00000487010 FAM19A2Q8N3H0 131 aa9.95□□□□□ -0.82
COL3A1-206ENST00000487010 OR9G1Q8NH87 305 aa9.95□□□□□ -0.82
COL3A1-206ENST00000487010 COMMD5Q9GZQ3 224 aa9.95□□□□□ -0.82
COL3A1-206ENST00000487010 SLC35D1Q9NTN3 355 aa9.95□□□□□ -0.82
COL3A1-206ENST00000487010 TRIOBPQ9H2D6 2365 aa9.95□□□□□ -0.82
COL3A1-206ENST00000487010 SRRM4A7MD48 611 aaKnown RBP9.95□□□□□ -0.82
COL3A1-206ENST00000487010 CHRNB4P30926 498 aa9.95□□□□□ -0.82
COL3A1-206ENST00000487010 BHLHA15Q7RTS1 189 aaPredicted RBP9.95□□□□□ -0.82
COL3A1-206ENST00000487010 WIPF2Q8TF74 440 aaPredicted RBP9.95□□□□□ -0.82
COL3A1-206ENST00000487010 FAM168AQ92567 244 aa9.95□□□□□ -0.82
COL3A1-206ENST00000487010 FAM167A-AS1Q96KT0 104 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms