RNA–Protein interactions for RNA: ENST00000486260.5

THBS3-207, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 1,763 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-207ENST00000486260 C19orf54Q5BKX5 351 aa12.97□□□□□ -0.33
THBS3-207ENST00000486260 MRPL41Q8IXM3 137 aaKnown RBP12.97□□□□□ -0.33
THBS3-207ENST00000486260 RAB40CQ96S21 281 aa12.97□□□□□ -0.33
THBS3-207ENST00000486260 PSENENQ9NZ42 101 aa12.97□□□□□ -0.33
THBS3-207ENST00000486260 L7N2F9 121 aa12.97□□□□□ -0.33
THBS3-207ENST00000486260 CTRB1P17538 263 aa12.97□□□□□ -0.33
THBS3-207ENST00000486260 SNCAP37840 140 aa12.97□□□□□ -0.33
THBS3-207ENST00000486260 VAMP2P63027 116 aa12.97□□□□□ -0.33
THBS3-207ENST00000486260 FGL1Q08830 312 aa12.97□□□□□ -0.33
THBS3-207ENST00000486260 CTRB2Q6GPI1 263 aa12.97□□□□□ -0.33
THBS3-207ENST00000486260 PRIMA1Q86XR5 153 aa12.97□□□□□ -0.33
THBS3-207ENST00000486260 TTC9CQ8N5M4 171 aa12.97□□□□□ -0.33
THBS3-207ENST00000486260 SMIM8Q96KF7 97 aa12.97□□□□□ -0.33
THBS3-207ENST00000486260 TMEM68Q96MH6 324 aa12.97□□□□□ -0.33
THBS3-207ENST00000486260 CIB3Q96Q77 187 aaPredicted RBP12.97□□□□□ -0.33
THBS3-207ENST00000486260 C16orf95Q9H693 158 aa12.97□□□□□ -0.33
THBS3-207ENST00000486260 MBD2Q9UBB5 411 aa12.97□□□□□ -0.33
THBS3-207ENST00000486260 NPIPB5A8MRT5 1133 aa12.96□□□□□ -0.34
THBS3-207ENST00000486260 NDUFA7O95182 113 aa12.96□□□□□ -0.34
THBS3-207ENST00000486260 IFNA10P01566 189 aa12.96□□□□□ -0.34
THBS3-207ENST00000486260 CRYGCP07315 174 aa12.96□□□□□ -0.34
THBS3-207ENST00000486260 PET100P0DJ07 73 aa12.96□□□□□ -0.34
THBS3-207ENST00000486260 PVALBP20472 110 aaPredicted RBP12.96□□□□□ -0.34
THBS3-207ENST00000486260 SPANXN5Q5MJ07 72 aa12.96□□□□□ -0.34
THBS3-207ENST00000486260 PRSS54Q6PEW0 395 aa12.96□□□□□ -0.34
THBS3-207ENST00000486260 THAP6Q8TBB0 222 aa12.96□□□□□ -0.34
THBS3-207ENST00000486260 P2RX4Q99571 388 aa12.96□□□□□ -0.34
THBS3-207ENST00000486260 WNT10AQ9GZT5 417 aa12.96□□□□□ -0.34
THBS3-207ENST00000486260 ZNF580Q9UK33 172 aa12.96□□□□□ -0.34
THBS3-207ENST00000486260 SOX15O60248 233 aa12.95□□□□□ -0.34
THBS3-207ENST00000486260 FBXO24O75426 580 aa12.95□□□□□ -0.34
THBS3-207ENST00000486260 PRH1P02810 166 aa12.95□□□□□ -0.34
THBS3-207ENST00000486260 RNASE2P10153 161 aaKnown RBP12.95□□□□□ -0.34
THBS3-207ENST00000486260 PPIFP30405 207 aaKnown RBP12.95□□□□□ -0.34
THBS3-207ENST00000486260 HTR2BP41595 481 aa12.95□□□□□ -0.34
THBS3-207ENST00000486260 ZNF329Q86UD4 541 aa12.95□□□□□ -0.34
THBS3-207ENST00000486260 TCTE3Q8IZS6 198 aa12.95□□□□□ -0.34
THBS3-207ENST00000486260 SLC24A4Q8NFF2 622 aa12.95□□□□□ -0.34
THBS3-207ENST00000486260 LINC01006Q8NI28 216 aa12.95□□□□□ -0.34
THBS3-207ENST00000486260 FAM110DQ8TAY7 271 aaPredicted RBP12.95□□□□□ -0.34
THBS3-207ENST00000486260 U3KQ87 197 aa12.95□□□□□ -0.34
THBS3-207ENST00000486260 C2CD3Q4AC94 2353 aa12.95□□□□□ -0.34
THBS3-207ENST00000486260 E5RGE8 158 aa12.94□□□□□ -0.34
THBS3-207ENST00000486260 RGS13O14921 159 aa12.94□□□□□ -0.34
THBS3-207ENST00000486260 DEFA4P12838 97 aa12.94□□□□□ -0.34
THBS3-207ENST00000486260 TAS2R30P59541 319 aa12.94□□□□□ -0.34
THBS3-207ENST00000486260 RPL23AP62750 156 aaKnown RBP12.94□□□□□ -0.34
THBS3-207ENST00000486260 CFHR3Q02985 330 aa12.94□□□□□ -0.34
THBS3-207ENST00000486260 BSXQ3C1V8 233 aa12.94□□□□□ -0.34
THBS3-207ENST00000486260 C10orf99Q6UWK7 81 aa12.94□□□□□ -0.34
THBS3-207ENST00000486260 TMEM170AQ8WVE7 144 aa12.94□□□□□ -0.34
THBS3-207ENST00000486260 OR4C12Q96R67 309 aa12.94□□□□□ -0.34
THBS3-207ENST00000486260 F11RQ9Y624 299 aaKnown RBP12.94□□□□□ -0.34
THBS3-207ENST00000486260 LY86O95711 162 aa12.94□□□□□ -0.34
THBS3-207ENST00000486260 HKR1P10072 659 aa12.94□□□□□ -0.34
THBS3-207ENST00000486260 LYL1P12980 280 aa12.94□□□□□ -0.34
THBS3-207ENST00000486260 NPY1RP25929 384 aa12.94□□□□□ -0.34
THBS3-207ENST00000486260 CAV2P51636 162 aa12.94□□□□□ -0.34
THBS3-207ENST00000486260 MFAP2P55001 183 aa12.94□□□□□ -0.34
THBS3-207ENST00000486260 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.94□□□□□ -0.34
THBS3-207ENST00000486260 ZNF114Q8NC26 417 aa12.94□□□□□ -0.34
THBS3-207ENST00000486260 OR4F5Q8NH21 305 aa12.94□□□□□ -0.34
THBS3-207ENST00000486260 DCUN1D4Q92564 292 aa12.94□□□□□ -0.34
THBS3-207ENST00000486260 ZNF355PQ9NSJ1 428 aa12.94□□□□□ -0.34
THBS3-207ENST00000486260 STRAPQ9Y3F4 350 aaKnown RBP12.94□□□□□ -0.34
THBS3-207ENST00000486260 DMRT1Q9Y5R6 373 aa12.94□□□□□ -0.34
THBS3-207ENST00000486260 FAM24AA6NFZ4 105 aa12.93□□□□□ -0.34
THBS3-207ENST00000486260 C15orf62A8K5M9 175 aa12.93□□□□□ -0.34
THBS3-207ENST00000486260 TSC22D2O75157 780 aa12.93□□□□□ -0.34
THBS3-207ENST00000486260 SUB1P53999 127 aaKnown RBP eCLIP12.93□□□□□ -0.34
THBS3-207ENST00000486260 C2orf83Q53S99 150 aa12.93□□□□□ -0.34
THBS3-207ENST00000486260 CENPVQ7Z7K6 275 aaPredicted RBP12.93□□□□□ -0.34
THBS3-207ENST00000486260 LURAP1LQ8IV03 231 aa12.93□□□□□ -0.34
THBS3-207ENST00000486260 OR1P1Q8NH06 330 aa12.93□□□□□ -0.34
THBS3-207ENST00000486260 GON7Q9BXV9 100 aa12.93□□□□□ -0.34
THBS3-207ENST00000486260 LYRM2Q9NU23 88 aaPredicted RBP12.93□□□□□ -0.34
THBS3-207ENST00000486260 FXYD6-FXYD2A0A087WZ82 144 aa12.92□□□□□ -0.34
THBS3-207ENST00000486260 PSMB11A5LHX3 300 aa12.92□□□□□ -0.34
THBS3-207ENST00000486260 SLC25A4P12235 298 aa12.92□□□□□ -0.34
THBS3-207ENST00000486260 MDKP21741 143 aaPredicted RBP12.92□□□□□ -0.34
THBS3-207ENST00000486260 RPP30P78346 268 aaKnown RBP12.92□□□□□ -0.34
THBS3-207ENST00000486260 SLC25A24Q6NUK1 477 aa12.92□□□□□ -0.34
THBS3-207ENST00000486260 OR11H4Q8NGC9 324 aa12.92□□□□□ -0.34
THBS3-207ENST00000486260 MS4A10Q96PG2 267 aa12.92□□□□□ -0.34
THBS3-207ENST00000486260 FANCD2OSQ96PS1 177 aa12.92□□□□□ -0.34
THBS3-207ENST00000486260 METTL15P1P0C7V9 234 aa12.92□□□□□ -0.34
THBS3-207ENST00000486260 P2RY1P47900 373 aa12.92□□□□□ -0.34
THBS3-207ENST00000486260 SLC35B1P78383 322 aa12.92□□□□□ -0.34
THBS3-207ENST00000486260 TMEM14EPQ6UXP3 125 aa12.92□□□□□ -0.34
THBS3-207ENST00000486260 CLPSL1A2RUU4 121 aa12.91□□□□□ -0.34
THBS3-207ENST00000486260 IGLV1-40P01703 118 aa12.91□□□□□ -0.34
THBS3-207ENST00000486260 IFNA4P05014 189 aa12.91□□□□□ -0.34
THBS3-207ENST00000486260 OR8U8P0C7N1 319 aa12.91□□□□□ -0.34
THBS3-207ENST00000486260 LCNL1Q6ZST4 164 aa12.91□□□□□ -0.34
THBS3-207ENST00000486260 ZNF546Q86UE3 836 aa12.91□□□□□ -0.34
THBS3-207ENST00000486260 TMEM252Q8N6L7 170 aa12.91□□□□□ -0.34
THBS3-207ENST00000486260 RNF114Q9Y508 228 aa12.91□□□□□ -0.34
THBS3-207ENST00000486260 IGLV11-55A0A075B6I3 123 aa12.9□□□□□ -0.34
THBS3-207ENST00000486260 IGSF23A1L1A6 192 aa12.9□□□□□ -0.34
THBS3-207ENST00000486260 HAX1O00165 279 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms