RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 LIMS3P0CW19 117 aa5.68□□□□□ -1.5
XRN1-212ENST00000486211 LIMS4P0CW20 117 aa5.68□□□□□ -1.5
XRN1-212ENST00000486211 CRHBPP24387 322 aa5.68□□□□□ -1.5
XRN1-212ENST00000486211 QRFPP83859 136 aa5.68□□□□□ -1.5
XRN1-212ENST00000486211 RELQ04864 619 aaPredicted RBP5.68□□□□□ -1.5
XRN1-212ENST00000486211 Q499Y3 187 aa5.68□□□□□ -1.5
XRN1-212ENST00000486211 GSG1LQ6UXU4 331 aa5.68□□□□□ -1.5
XRN1-212ENST00000486211 UBAC2Q8NBM4 344 aa5.68□□□□□ -1.5
XRN1-212ENST00000486211 OR10W1Q8NGF6 305 aa5.68□□□□□ -1.5
XRN1-212ENST00000486211 DCANP1Q8TF63 244 aa5.68□□□□□ -1.5
XRN1-212ENST00000486211 TRUB1Q8WWH5 349 aaKnown RBP5.68□□□□□ -1.5
XRN1-212ENST00000486211 SMIM19Q96E16 107 aa5.68□□□□□ -1.5
XRN1-212ENST00000486211 RAB40CQ96S21 281 aa5.68□□□□□ -1.5
XRN1-212ENST00000486211 TMEM70Q9BUB7 260 aa5.68□□□□□ -1.5
XRN1-212ENST00000486211 ZNF586Q9NXT0 402 aa5.68□□□□□ -1.5
XRN1-212ENST00000486211 YTHDF2Q9Y5A9 579 aaKnown RBP5.68□□□□□ -1.5
XRN1-212ENST00000486211 G3V2T6 193 aa5.67□□□□□ -1.5
XRN1-212ENST00000486211 DIRAS3O95661 229 aa5.67□□□□□ -1.5
XRN1-212ENST00000486211 IGLV2-14P01704 120 aa5.67□□□□□ -1.5
XRN1-212ENST00000486211 SLPIP03973 132 aa5.67□□□□□ -1.5
XRN1-212ENST00000486211 DNAH10OSP0CZ25 163 aa5.67□□□□□ -1.5
XRN1-212ENST00000486211 GNB3P16520 340 aa5.67□□□□□ -1.5
XRN1-212ENST00000486211 GCSHP23434 173 aa5.67□□□□□ -1.5
XRN1-212ENST00000486211 GNRHRP30968 328 aa5.67□□□□□ -1.5
XRN1-212ENST00000486211 ALDH3B2P48448 385 aa5.67□□□□□ -1.5
XRN1-212ENST00000486211 ERVFC1-1P60608 527 aa5.67□□□□□ -1.5
XRN1-212ENST00000486211 DAD1P61803 113 aa5.67□□□□□ -1.5
XRN1-212ENST00000486211 WT1-ASQ06250 92 aa5.67□□□□□ -1.5
XRN1-212ENST00000486211 Q56UQ5 140 aa5.67□□□□□ -1.5
XRN1-212ENST00000486211 TMEM69Q5SWH9 247 aa5.67□□□□□ -1.5
XRN1-212ENST00000486211 MEDAGQ5VYS4 303 aa5.67□□□□□ -1.5
XRN1-212ENST00000486211 KCTD9Q7L273 389 aa5.67□□□□□ -1.5
XRN1-212ENST00000486211 OR10J5Q8NHC4 309 aa5.67□□□□□ -1.5
XRN1-212ENST00000486211 SLC29A1Q99808 456 aa5.67□□□□□ -1.5
XRN1-212ENST00000486211 UPK3BQ9BT76 320 aa5.67□□□□□ -1.5
XRN1-212ENST00000486211 MRPS7Q9Y2R9 242 aaKnown RBP5.67□□□□□ -1.5
XRN1-212ENST00000486211 PKHD1L1Q86WI1 4243 aa5.66□□□□□ -1.5
XRN1-212ENST00000486211 TCRBV3S1A0A5B6 114 aa5.66□□□□□ -1.5
XRN1-212ENST00000486211 TMEM14DPA8MWL7 114 aa5.66□□□□□ -1.5
XRN1-212ENST00000486211 H3BMM0 161 aa5.66□□□□□ -1.5
XRN1-212ENST00000486211 DCTN3O75935 186 aa5.66□□□□□ -1.5
XRN1-212ENST00000486211 LALBAP00709 142 aa5.66□□□□□ -1.5
XRN1-212ENST00000486211 SERPINE2P07093 398 aa5.66□□□□□ -1.5
XRN1-212ENST00000486211 P0C879 139 aa5.66□□□□□ -1.5
XRN1-212ENST00000486211 UBBP0CG47 229 aa5.66□□□□□ -1.5
XRN1-212ENST00000486211 TMEM50BP56557 158 aa5.66□□□□□ -1.5
XRN1-212ENST00000486211 KRTAP10-4P60372 401 aaPredicted RBP5.66□□□□□ -1.5
XRN1-212ENST00000486211 EIF4EBP1Q13541 118 aaPredicted RBP5.66□□□□□ -1.5
XRN1-212ENST00000486211 TIMM50Q3ZCQ8 353 aa5.66□□□□□ -1.5
XRN1-212ENST00000486211 SLC25A24Q6NUK1 477 aa5.66□□□□□ -1.5
XRN1-212ENST00000486211 ZNF773Q6PK81 442 aa5.66□□□□□ -1.5
XRN1-212ENST00000486211 H1FOOQ8IZA3 346 aaPredicted RBP5.66□□□□□ -1.5
XRN1-212ENST00000486211 FAM89BQ8N5H3 189 aa5.66□□□□□ -1.5
XRN1-212ENST00000486211 NKAIN3Q8N8D7 197 aa5.66□□□□□ -1.5
XRN1-212ENST00000486211 STXBP6Q8NFX7 210 aa5.66□□□□□ -1.5
XRN1-212ENST00000486211 OR52I1Q8NGK6 324 aa5.66□□□□□ -1.5
XRN1-212ENST00000486211 OR4S2Q8NH73 311 aa5.66□□□□□ -1.5
XRN1-212ENST00000486211 PGLYRP3Q96LB9 341 aa5.66□□□□□ -1.5
XRN1-212ENST00000486211 DERL3Q96Q80 235 aa5.66□□□□□ -1.5
XRN1-212ENST00000486211 CMSS1Q9BQ75 279 aaKnown RBP5.66□□□□□ -1.5
XRN1-212ENST00000486211 NXF2Q9GZY0 626 aaKnown RBP5.66□□□□□ -1.5
XRN1-212ENST00000486211 LPAR5Q9H1C0 372 aa5.66□□□□□ -1.5
XRN1-212ENST00000486211 FNDC4Q9H6D8 234 aaPredicted RBP5.66□□□□□ -1.5
XRN1-212ENST00000486211 BET1LQ9NYM9 111 aa5.66□□□□□ -1.5
XRN1-212ENST00000486211 HSF4Q9ULV5 492 aa5.66□□□□□ -1.5
XRN1-212ENST00000486211 PRELID3BQ9Y3B1 194 aa5.66□□□□□ -1.5
XRN1-212ENST00000486211 RBM7Q9Y580 266 aaKnown RBP5.66□□□□□ -1.5
XRN1-212ENST00000486211 IGHV3OR16-12A0A075B7B8 117 aa5.65□□□□□ -1.5
XRN1-212ENST00000486211 A0A087WTM6 91 aa5.65□□□□□ -1.5
XRN1-212ENST00000486211 TRAV3A0A0B4J244 114 aa5.65□□□□□ -1.5
XRN1-212ENST00000486211 EIF4EP06730 217 aaKnown RBP5.65□□□□□ -1.5
XRN1-212ENST00000486211 OR13C7P0DN81 318 aa5.65□□□□□ -1.5
XRN1-212ENST00000486211 GABRB1P18505 474 aa5.65□□□□□ -1.5
XRN1-212ENST00000486211 TAS2R43P59537 309 aa5.65□□□□□ -1.5
XRN1-212ENST00000486211 NUTF2P61970 127 aaKnown RBP5.65□□□□□ -1.5
XRN1-212ENST00000486211 YIF1BQ5BJH7 314 aa5.65□□□□□ -1.5
XRN1-212ENST00000486211 TOMM20LQ6UXN7 152 aa5.65□□□□□ -1.5
XRN1-212ENST00000486211 LRRTM1Q86UE6 522 aa5.65□□□□□ -1.5
XRN1-212ENST00000486211 GINS3Q9BRX5 216 aa5.65□□□□□ -1.5
XRN1-212ENST00000486211 QTRT1Q9BXR0 403 aaKnown RBP5.65□□□□□ -1.5
XRN1-212ENST00000486211 AMBNQ9NP70 447 aa5.65□□□□□ -1.5
XRN1-212ENST00000486211 FAM30AQ9NZY2 134 aa5.65□□□□□ -1.5
XRN1-212ENST00000486211 RBMX2Q9Y388 322 aaKnown RBP5.65□□□□□ -1.5
XRN1-212ENST00000486211 F11RQ9Y624 299 aaKnown RBP5.65□□□□□ -1.5
XRN1-212ENST00000486211 DNAH8Q96JB1 4490 aa5.64□□□□□ -1.51
XRN1-212ENST00000486211 LOC102723971A0A1B0GUV8 181 aa5.64□□□□□ -1.51
XRN1-212ENST00000486211 CYB5BO43169 146 aa5.64□□□□□ -1.51
XRN1-212ENST00000486211 CDK1P06493 297 aa5.64□□□□□ -1.51
XRN1-212ENST00000486211 ASIPP42127 132 aa5.64□□□□□ -1.51
XRN1-212ENST00000486211 ETV1P50549 477 aa5.64□□□□□ -1.51
XRN1-212ENST00000486211 SUMO1P63165 101 aaKnown RBP5.64□□□□□ -1.51
XRN1-212ENST00000486211 CLINT1Q14677 625 aa5.64□□□□□ -1.51
XRN1-212ENST00000486211 SSX1Q16384 188 aa5.64□□□□□ -1.51
XRN1-212ENST00000486211 RNASE12Q5GAN4 147 aaKnown RBP5.64□□□□□ -1.51
XRN1-212ENST00000486211 PSMG4Q5JS54 123 aa5.64□□□□□ -1.51
XRN1-212ENST00000486211 PLAC9Q5JTB6 97 aa5.64□□□□□ -1.51
XRN1-212ENST00000486211 C1orf100Q5SVJ3 147 aa5.64□□□□□ -1.51
XRN1-212ENST00000486211 OGFRL1Q5TC84 451 aaPredicted RBP5.64□□□□□ -1.51
XRN1-212ENST00000486211 SPATA24Q86W54 205 aa5.64□□□□□ -1.51
XRN1-212ENST00000486211 ARHGAP5-AS1Q96IT6 56 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms