RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 NAA60Q9H7X0 242 aa9.57□□□□□ -0.88
PTCD1-205ENST00000485746 PLEKHA3Q9HB20 300 aa9.57□□□□□ -0.88
PTCD1-205ENST00000485746 ENY2Q9NPA8 101 aa9.57□□□□□ -0.88
PTCD1-205ENST00000485746 ZC4H2Q9NQZ6 224 aa9.57□□□□□ -0.88
PTCD1-205ENST00000485746 GPR132Q9UNW8 380 aa9.57□□□□□ -0.88
PTCD1-205ENST00000485746 F11RQ9Y624 299 aaKnown RBP9.57□□□□□ -0.88
PTCD1-205ENST00000485746 NOTCH3Q9UM47 2321 aa9.57□□□□□ -0.88
PTCD1-205ENST00000485746 NOTCH1P46531 2555 aa9.56□□□□□ -0.88
PTCD1-205ENST00000485746 DBX1A6NMT0 343 aa9.56□□□□□ -0.88
PTCD1-205ENST00000485746 UCP1P25874 307 aa9.56□□□□□ -0.88
PTCD1-205ENST00000485746 GPR183P32249 361 aa9.56□□□□□ -0.88
PTCD1-205ENST00000485746 IZUMO4Q1ZYL8 232 aa9.56□□□□□ -0.88
PTCD1-205ENST00000485746 SPINK9Q5DT21 86 aa9.56□□□□□ -0.88
PTCD1-205ENST00000485746 PLET1Q6UQ28 207 aa9.56□□□□□ -0.88
PTCD1-205ENST00000485746 UBAC2Q8NBM4 344 aa9.56□□□□□ -0.88
PTCD1-205ENST00000485746 VN1R17PQ8TDU5 208 aa9.56□□□□□ -0.88
PTCD1-205ENST00000485746 MISP3Q96FF7 219 aa9.56□□□□□ -0.88
PTCD1-205ENST00000485746 CCDC140Q96MF4 163 aa9.56□□□□□ -0.88
PTCD1-205ENST00000485746 C5orf66Q9H5L9 145 aa9.56□□□□□ -0.88
PTCD1-205ENST00000485746 SLC2A8Q9NY64 477 aa9.56□□□□□ -0.88
PTCD1-205ENST00000485746 V9GYH0 126 aa9.56□□□□□ -0.88
PTCD1-205ENST00000485746 CRYM-AS1A6NIL9 109 aa9.55□□□□□ -0.88
PTCD1-205ENST00000485746 IGKV1-5P01602 117 aa9.55□□□□□ -0.88
PTCD1-205ENST00000485746 CSN3P07498 182 aa9.55□□□□□ -0.88
PTCD1-205ENST00000485746 AKR1C4P17516 323 aa9.55□□□□□ -0.88
PTCD1-205ENST00000485746 SNCAP37840 140 aa9.55□□□□□ -0.88
PTCD1-205ENST00000485746 HOXA1P49639 335 aaPredicted RBP9.55□□□□□ -0.88
PTCD1-205ENST00000485746 PRCDQ00LT1 54 aa9.55□□□□□ -0.88
PTCD1-205ENST00000485746 Q56UQ5 140 aa9.55□□□□□ -0.88
PTCD1-205ENST00000485746 LCN12Q6JVE5 192 aa9.55□□□□□ -0.88
PTCD1-205ENST00000485746 CCDC190Q86UF4 302 aa9.55□□□□□ -0.88
PTCD1-205ENST00000485746 RBPMSQ93062 196 aaKnown RBP9.55□□□□□ -0.88
PTCD1-205ENST00000485746 TMEM222Q9H0R3 208 aa9.55□□□□□ -0.88
PTCD1-205ENST00000485746 SMAD5-AS1Q9Y6J3 95 aa9.55□□□□□ -0.88
PTCD1-205ENST00000485746 A0A0B4J293 547 aa9.54□□□□□ -0.88
PTCD1-205ENST00000485746 OR2T8A6NH00 312 aa9.54□□□□□ -0.88
PTCD1-205ENST00000485746 ST8SIA3O43173 380 aa9.54□□□□□ -0.88
PTCD1-205ENST00000485746 IGLV1-51P01701 117 aa9.54□□□□□ -0.88
PTCD1-205ENST00000485746 ANXA3P12429 323 aa9.54□□□□□ -0.88
PTCD1-205ENST00000485746 SUB1P53999 127 aaKnown RBP eCLIP9.54□□□□□ -0.88
PTCD1-205ENST00000485746 KLF9Q13886 244 aaPredicted RBP9.54□□□□□ -0.88
PTCD1-205ENST00000485746 KLK9Q2XQG4 91 aa9.54□□□□□ -0.88
PTCD1-205ENST00000485746 TMEM268Q5VZI3 342 aa9.54□□□□□ -0.88
PTCD1-205ENST00000485746 TRIQKQ629K1 86 aa9.54□□□□□ -0.88
PTCD1-205ENST00000485746 GPHB5Q86YW7 130 aa9.54□□□□□ -0.88
PTCD1-205ENST00000485746 FAM219AQ8IW50 185 aa9.54□□□□□ -0.88
PTCD1-205ENST00000485746 OR2C3Q8N628 320 aa9.54□□□□□ -0.88
PTCD1-205ENST00000485746 OR1P1Q8NH06 330 aa9.54□□□□□ -0.88
PTCD1-205ENST00000485746 ZNF502Q8TBZ5 544 aa9.54□□□□□ -0.88
PTCD1-205ENST00000485746 GLYATL2Q8WU03 294 aa9.54□□□□□ -0.88
PTCD1-205ENST00000485746 PINX1Q96BK5 328 aaKnown RBP9.54□□□□□ -0.88
PTCD1-205ENST00000485746 PALMDQ9NP74 551 aa9.54□□□□□ -0.88
PTCD1-205ENST00000485746 C21orf62Q9NYP8 219 aa9.54□□□□□ -0.88
PTCD1-205ENST00000485746 KLK9Q9UKQ9 250 aa9.54□□□□□ -0.88
PTCD1-205ENST00000485746 IGHV3-35A0A0C4DH35 117 aa9.53□□□□□ -0.88
PTCD1-205ENST00000485746 LGALS9O00182 355 aa9.53□□□□□ -0.88
PTCD1-205ENST00000485746 TGOLN2O43493 480 aa9.53□□□□□ -0.88
PTCD1-205ENST00000485746 CDS2O95674 445 aa9.53□□□□□ -0.88
PTCD1-205ENST00000485746 ETV6P41212 452 aa9.53□□□□□ -0.88
PTCD1-205ENST00000485746 ZNF79Q15937 498 aa9.53□□□□□ -0.88
PTCD1-205ENST00000485746 IL34Q6ZMJ4 242 aa9.53□□□□□ -0.88
PTCD1-205ENST00000485746 TMED4Q7Z7H5 227 aa9.53□□□□□ -0.88
PTCD1-205ENST00000485746 SELENOHQ8IZQ5 122 aaKnown RBP9.53□□□□□ -0.88
PTCD1-205ENST00000485746 B9D2Q9BPU9 175 aa9.53□□□□□ -0.88
PTCD1-205ENST00000485746 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.53□□□□□ -0.88
PTCD1-205ENST00000485746 SIGLEC8Q9NYZ4 499 aa9.53□□□□□ -0.88
PTCD1-205ENST00000485746 LSM4Q9Y4Z0 139 aaKnown RBP9.53□□□□□ -0.88
PTCD1-205ENST00000485746 DMRT1Q9Y5R6 373 aa9.53□□□□□ -0.88
PTCD1-205ENST00000485746 LINC00854A0A1B0GVQ3 168 aa9.52□□□□□ -0.89
PTCD1-205ENST00000485746 C2orf70A6NJV1 201 aa9.52□□□□□ -0.89
PTCD1-205ENST00000485746 FOLR2P14207 255 aa9.52□□□□□ -0.89
PTCD1-205ENST00000485746 MFAP2P55001 183 aa9.52□□□□□ -0.89
PTCD1-205ENST00000485746 MFAP4P55083 255 aa9.52□□□□□ -0.89
PTCD1-205ENST00000485746 GTSCR1Q86UQ5 136 aa9.52□□□□□ -0.89
PTCD1-205ENST00000485746 OR2K2Q8NGT1 345 aa9.52□□□□□ -0.89
PTCD1-205ENST00000485746 SCARB1Q8WTV0 552 aa9.52□□□□□ -0.89
PTCD1-205ENST00000485746 TRIM63Q969Q1 353 aa9.52□□□□□ -0.89
PTCD1-205ENST00000485746 GPR146Q96CH1 333 aa9.52□□□□□ -0.89
PTCD1-205ENST00000485746 BSCL2Q96G97 398 aaPredicted RBP9.52□□□□□ -0.89
PTCD1-205ENST00000485746 ASCL2Q99929 193 aa9.52□□□□□ -0.89
PTCD1-205ENST00000485746 GAR1Q9NY12 217 aaKnown RBP9.52□□□□□ -0.89
PTCD1-205ENST00000485746 TNCP24821 2201 aa9.51□□□□□ -0.89
PTCD1-205ENST00000485746 PIGBOS1A0A0B4J2F0 54 aa9.51□□□□□ -0.89
PTCD1-205ENST00000485746 A0A0G2JRQ6 117 aa9.51□□□□□ -0.89
PTCD1-205ENST00000485746 CEBPZOSA8MTT3 80 aa9.51□□□□□ -0.89
PTCD1-205ENST00000485746 NUPL2O15504 423 aaKnown RBP9.51□□□□□ -0.89
PTCD1-205ENST00000485746 P0C879 139 aa9.51□□□□□ -0.89
PTCD1-205ENST00000485746 SPCS3P61009 180 aa9.51□□□□□ -0.89
PTCD1-205ENST00000485746 SRPXP78539 464 aa9.51□□□□□ -0.89
PTCD1-205ENST00000485746 TMEM187Q14656 261 aa9.51□□□□□ -0.89
PTCD1-205ENST00000485746 GUCA2BQ16661 112 aa9.51□□□□□ -0.89
PTCD1-205ENST00000485746 SPSB3Q6PJ21 355 aa9.51□□□□□ -0.89
PTCD1-205ENST00000485746 LGI3Q8N145 548 aa9.51□□□□□ -0.89
PTCD1-205ENST00000485746 LHFPL5Q8TAF8 219 aa9.51□□□□□ -0.89
PTCD1-205ENST00000485746 DEDD2Q8WXF8 326 aa9.51□□□□□ -0.89
PTCD1-205ENST00000485746 IL22RA2Q969J5 263 aa9.51□□□□□ -0.89
PTCD1-205ENST00000485746 SLC25A21Q9BQT8 299 aaPredicted RBP9.51□□□□□ -0.89
PTCD1-205ENST00000485746 C20orf24Q9BUV8 137 aa9.51□□□□□ -0.89
PTCD1-205ENST00000485746 SRRQ9GZT4 340 aa9.51□□□□□ -0.89
PTCD1-205ENST00000485746 TECRQ9NZ01 308 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms