RNA–Protein interactions for RNA: ENST00000484476.5

LDLRAP1-205, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 1 (best)

Gene LDLRAP1, Length 657 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-205ENST00000484476 RRNAD1Q96FB5 475 aaKnown RBP10.58□□□□□ -0.72
LDLRAP1-205ENST00000484476 BSCL2Q96G97 398 aaPredicted RBP10.58□□□□□ -0.72
LDLRAP1-205ENST00000484476 DIRAS2Q96HU8 199 aa10.58□□□□□ -0.72
LDLRAP1-205ENST00000484476 ATP6V0BQ99437 205 aa10.58□□□□□ -0.72
LDLRAP1-205ENST00000484476 SPATA25Q9BR10 227 aa10.58□□□□□ -0.72
LDLRAP1-205ENST00000484476 ZC4H2Q9NQZ6 224 aa10.58□□□□□ -0.72
LDLRAP1-205ENST00000484476 C21orf62Q9NYP8 219 aa10.58□□□□□ -0.72
LDLRAP1-205ENST00000484476 MRPL27Q9P0M9 148 aaKnown RBP10.58□□□□□ -0.72
LDLRAP1-205ENST00000484476 C14orf166Q9Y224 244 aaKnown RBP10.58□□□□□ -0.72
LDLRAP1-205ENST00000484476 DNAH3Q8TD57 4116 aa10.57□□□□□ -0.72
LDLRAP1-205ENST00000484476 CGB1A6NKQ9 187 aa10.57□□□□□ -0.72
LDLRAP1-205ENST00000484476 C15orf61A6NNL5 157 aa10.57□□□□□ -0.72
LDLRAP1-205ENST00000484476 TGOLN2O43493 480 aa10.57□□□□□ -0.72
LDLRAP1-205ENST00000484476 SUB1P53999 127 aaKnown RBP eCLIP10.57□□□□□ -0.72
LDLRAP1-205ENST00000484476 RND3P61587 244 aa10.57□□□□□ -0.72
LDLRAP1-205ENST00000484476 HSPE1P61604 102 aaKnown RBP10.57□□□□□ -0.72
LDLRAP1-205ENST00000484476 WT1-ASQ06250 92 aa10.57□□□□□ -0.72
LDLRAP1-205ENST00000484476 IL18Q14116 193 aa10.57□□□□□ -0.72
LDLRAP1-205ENST00000484476 LAMTOR1Q6IAA8 161 aa10.57□□□□□ -0.72
LDLRAP1-205ENST00000484476 STEAP1BQ6NZ63 245 aa10.57□□□□□ -0.72
LDLRAP1-205ENST00000484476 OR1P1Q8NH06 330 aa10.57□□□□□ -0.72
LDLRAP1-205ENST00000484476 ABHD1Q96SE0 405 aa10.57□□□□□ -0.72
LDLRAP1-205ENST00000484476 PLEKHA3Q9HB20 300 aa10.57□□□□□ -0.72
LDLRAP1-205ENST00000484476 ENY2Q9NPA8 101 aa10.57□□□□□ -0.72
LDLRAP1-205ENST00000484476 TMEM14BQ9NUH8 114 aa10.57□□□□□ -0.72
LDLRAP1-205ENST00000484476 C19orf73Q9NVV2 129 aa10.57□□□□□ -0.72
LDLRAP1-205ENST00000484476 C3orf85A0A1B0GTC6 90 aa10.56□□□□□ -0.72
LDLRAP1-205ENST00000484476 IZUMO1RA6ND01 250 aa10.56□□□□□ -0.72
LDLRAP1-205ENST00000484476 OR2T8A6NH00 312 aa10.56□□□□□ -0.72
LDLRAP1-205ENST00000484476 A8MWP6 167 aa10.56□□□□□ -0.72
LDLRAP1-205ENST00000484476 NUPL2O15504 423 aaKnown RBP10.56□□□□□ -0.72
LDLRAP1-205ENST00000484476 IFNA17P01571 189 aa10.56□□□□□ -0.72
LDLRAP1-205ENST00000484476 PPP5CP53041 499 aa10.56□□□□□ -0.72
LDLRAP1-205ENST00000484476 RELQ04864 619 aaPredicted RBP10.56□□□□□ -0.72
LDLRAP1-205ENST00000484476 OR52B4Q8NGK2 314 aa10.56□□□□□ -0.72
LDLRAP1-205ENST00000484476 MRGPRFQ96AM1 343 aa10.56□□□□□ -0.72
LDLRAP1-205ENST00000484476 MISP3Q96FF7 219 aa10.56□□□□□ -0.72
LDLRAP1-205ENST00000484476 SEC22AQ96IW7 307 aa10.56□□□□□ -0.72
LDLRAP1-205ENST00000484476 SCGB3A2Q96PL1 93 aa10.56□□□□□ -0.72
LDLRAP1-205ENST00000484476 C20orf24Q9BUV8 137 aa10.56□□□□□ -0.72
LDLRAP1-205ENST00000484476 C6orf62Q9GZU0 229 aaPredicted RBP10.56□□□□□ -0.72
LDLRAP1-205ENST00000484476 DMRT1Q9Y5R6 373 aa10.56□□□□□ -0.72
LDLRAP1-205ENST00000484476 COL7A1Q02388 2944 aa10.56□□□□□ -0.72
LDLRAP1-205ENST00000484476 TRAV25A0A0B4J276 109 aa10.55□□□□□ -0.72
LDLRAP1-205ENST00000484476 IGHV3-35A0A0C4DH35 117 aa10.55□□□□□ -0.72
LDLRAP1-205ENST00000484476 TEX13DA0A0J9YY54 714 aaPredicted RBP10.55□□□□□ -0.72
LDLRAP1-205ENST00000484476 OR11H12B2RN74 326 aa10.55□□□□□ -0.72
LDLRAP1-205ENST00000484476 CTDSP2O14595 271 aa10.55□□□□□ -0.72
LDLRAP1-205ENST00000484476 SCGB2A1O75556 95 aa10.55□□□□□ -0.72
LDLRAP1-205ENST00000484476 PI3P19957 117 aa10.55□□□□□ -0.72
LDLRAP1-205ENST00000484476 MFAP4P55083 255 aa10.55□□□□□ -0.72
LDLRAP1-205ENST00000484476 SPCS2Q15005 226 aa10.55□□□□□ -0.72
LDLRAP1-205ENST00000484476 TM4SF20Q53R12 229 aa10.55□□□□□ -0.72
LDLRAP1-205ENST00000484476 SLC35G3Q8N808 338 aa10.55□□□□□ -0.72
LDLRAP1-205ENST00000484476 SCARB1Q8WTV0 552 aa10.55□□□□□ -0.72
LDLRAP1-205ENST00000484476 TM2D3Q9BRN9 247 aa10.55□□□□□ -0.72
LDLRAP1-205ENST00000484476 TMEM213A2RRL7 107 aa10.54□□□□□ -0.72
LDLRAP1-205ENST00000484476 ZNF785A8K8V0 405 aa10.54□□□□□ -0.72
LDLRAP1-205ENST00000484476 NDUFA4O00483 81 aa10.54□□□□□ -0.72
LDLRAP1-205ENST00000484476 YIF1AO95070 293 aa10.54□□□□□ -0.72
LDLRAP1-205ENST00000484476 AKAIN1P0CW23 69 aa10.54□□□□□ -0.72
LDLRAP1-205ENST00000484476 LYL1P12980 280 aa10.54□□□□□ -0.72
LDLRAP1-205ENST00000484476 PRCDQ00LT1 54 aa10.54□□□□□ -0.72
LDLRAP1-205ENST00000484476 HAGHQ16775 308 aa10.54□□□□□ -0.72
LDLRAP1-205ENST00000484476 LHFPL1Q86WI0 220 aa10.54□□□□□ -0.72
LDLRAP1-205ENST00000484476 MUC7Q8TAX7 377 aa10.54□□□□□ -0.72
LDLRAP1-205ENST00000484476 CACNG8Q8WXS5 425 aa10.54□□□□□ -0.72
LDLRAP1-205ENST00000484476 PPP1R14BQ96C90 147 aa10.54□□□□□ -0.72
LDLRAP1-205ENST00000484476 WDR89Q96FK6 387 aaPredicted RBP10.54□□□□□ -0.72
LDLRAP1-205ENST00000484476 TXN2Q99757 166 aa10.54□□□□□ -0.72
LDLRAP1-205ENST00000484476 PRRT1Q99946 306 aa10.54□□□□□ -0.72
LDLRAP1-205ENST00000484476 DAZ1Q9NQZ3 744 aaKnown RBP10.54□□□□□ -0.72
LDLRAP1-205ENST00000484476 CCDC59Q9P031 241 aaKnown RBP10.54□□□□□ -0.72
LDLRAP1-205ENST00000484476 IGHV3-21A0A0B4J1V1 117 aa10.53□□□□□ -0.72
LDLRAP1-205ENST00000484476 SCAF4O95104 1147 aaKnown RBP10.53□□□□□ -0.72
LDLRAP1-205ENST00000484476 CD74P04233 296 aa10.53□□□□□ -0.72
LDLRAP1-205ENST00000484476 CTSDP07339 412 aaPredicted RBP10.53□□□□□ -0.72
LDLRAP1-205ENST00000484476 BMI1P35226 326 aa10.53□□□□□ -0.72
LDLRAP1-205ENST00000484476 SURF2Q15527 256 aaPredicted RBP10.53□□□□□ -0.72
LDLRAP1-205ENST00000484476 BTNL8Q6UX41 500 aa10.53□□□□□ -0.72
LDLRAP1-205ENST00000484476 ADAMTSL5Q6ZMM2 481 aa10.53□□□□□ -0.72
LDLRAP1-205ENST00000484476 OR2C3Q8N628 320 aa10.53□□□□□ -0.72
LDLRAP1-205ENST00000484476 OR13C8Q8NGS7 320 aa10.53□□□□□ -0.72
LDLRAP1-205ENST00000484476 MARCH1Q8TCQ1 289 aa10.53□□□□□ -0.72
LDLRAP1-205ENST00000484476 SMIM4Q8WVI0 70 aa10.53□□□□□ -0.72
LDLRAP1-205ENST00000484476 PINX1Q96BK5 328 aaKnown RBP10.53□□□□□ -0.72
LDLRAP1-205ENST00000484476 THAP7Q9BT49 309 aaPredicted RBP10.53□□□□□ -0.72
LDLRAP1-205ENST00000484476 ZNF436Q9C0F3 470 aaPredicted RBP10.53□□□□□ -0.72
LDLRAP1-205ENST00000484476 C5orf66Q9H5L9 145 aa10.53□□□□□ -0.72
LDLRAP1-205ENST00000484476 CACFD1Q9UGQ2 172 aa10.53□□□□□ -0.72
LDLRAP1-205ENST00000484476 SCP2D1Q9UJQ7 156 aa10.53□□□□□ -0.72
LDLRAP1-205ENST00000484476 KCNIP3Q9Y2W7 256 aa10.53□□□□□ -0.72
LDLRAP1-205ENST00000484476 TENM3Q9P273 2699 aa10.53□□□□□ -0.72
LDLRAP1-205ENST00000484476 PIGBOS1A0A0B4J2F0 54 aa10.52□□□□□ -0.73
LDLRAP1-205ENST00000484476 FABP12A6NFH5 140 aa10.52□□□□□ -0.73
LDLRAP1-205ENST00000484476 K7EMT4 169 aa10.52□□□□□ -0.73
LDLRAP1-205ENST00000484476 CORTO00230 105 aa10.52□□□□□ -0.73
LDLRAP1-205ENST00000484476 CTDSPLO15194 276 aa10.52□□□□□ -0.73
LDLRAP1-205ENST00000484476 GNG7O60262 68 aa10.52□□□□□ -0.73
LDLRAP1-205ENST00000484476 NPBWR1P48145 328 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms