RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 SLURP1P55000 103 aa16.11■□□□□ 0.17
SEC13-217ENST00000482647 BEAN1Q3B7T3 259 aa16.11■□□□□ 0.17
SEC13-217ENST00000482647 KPRPQ5T749 579 aaPredicted RBP16.11■□□□□ 0.17
SEC13-217ENST00000482647 LGI3Q8N145 548 aa16.11■□□□□ 0.17
SEC13-217ENST00000482647 OR1L6Q8NGR2 347 aa16.11■□□□□ 0.17
SEC13-217ENST00000482647 DCUN1D4Q92564 292 aa16.11■□□□□ 0.17
SEC13-217ENST00000482647 PLEKHA3Q9HB20 300 aa16.11■□□□□ 0.17
SEC13-217ENST00000482647 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.11■□□□□ 0.17
SEC13-217ENST00000482647 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.1■□□□□ 0.17
SEC13-217ENST00000482647 A0A0G2JRQ6 117 aa16.1■□□□□ 0.17
SEC13-217ENST00000482647 ST8SIA3O43173 380 aa16.1■□□□□ 0.17
SEC13-217ENST00000482647 VAMP1P23763 118 aa16.1■□□□□ 0.17
SEC13-217ENST00000482647 SLC25A24Q6NUK1 477 aa16.1■□□□□ 0.17
SEC13-217ENST00000482647 Q6ZRM9 215 aa16.1■□□□□ 0.17
SEC13-217ENST00000482647 SLC35G3Q8N808 338 aa16.1■□□□□ 0.17
SEC13-217ENST00000482647 DLX4Q92988 240 aaPredicted RBP16.1■□□□□ 0.17
SEC13-217ENST00000482647 CXorf58Q96LI9 332 aa16.1■□□□□ 0.17
SEC13-217ENST00000482647 PRR13Q9NZ81 148 aa16.1■□□□□ 0.17
SEC13-217ENST00000482647 F11RQ9Y624 299 aaKnown RBP16.1■□□□□ 0.17
SEC13-217ENST00000482647 A0A0B4J2A0 478 aa16.09■□□□□ 0.17
SEC13-217ENST00000482647 OVOL1O14753 267 aa16.09■□□□□ 0.17
SEC13-217ENST00000482647 PLA2G10O15496 165 aa16.09■□□□□ 0.17
SEC13-217ENST00000482647 HOXD3P31249 432 aaPredicted RBP16.09■□□□□ 0.17
SEC13-217ENST00000482647 UBE2MP61081 183 aaKnown RBP16.09■□□□□ 0.17
SEC13-217ENST00000482647 ERHP84090 104 aaKnown RBP16.09■□□□□ 0.17
SEC13-217ENST00000482647 DEFA6Q01524 100 aa16.09■□□□□ 0.17
SEC13-217ENST00000482647 ZNF846Q147U1 533 aa16.09■□□□□ 0.17
SEC13-217ENST00000482647 OR2C3Q8N628 320 aa16.09■□□□□ 0.17
SEC13-217ENST00000482647 EEF1AKMT3Q96AZ1 226 aa16.09■□□□□ 0.17
SEC13-217ENST00000482647 GPR146Q96CH1 333 aa16.09■□□□□ 0.17
SEC13-217ENST00000482647 WDR12Q9GZL7 423 aaKnown RBP16.09■□□□□ 0.17
SEC13-217ENST00000482647 CACFD1Q9UGQ2 172 aa16.09■□□□□ 0.17
SEC13-217ENST00000482647 SHPKQ9UHJ6 478 aa16.09■□□□□ 0.17
SEC13-217ENST00000482647 SEC14L6B5MCN3 397 aa16.08■□□□□ 0.16
SEC13-217ENST00000482647 LYRM1O43325 122 aa16.08■□□□□ 0.16
SEC13-217ENST00000482647 BTCP35070 178 aa16.08■□□□□ 0.16
SEC13-217ENST00000482647 OR1P1Q8NH06 330 aa16.08■□□□□ 0.16
SEC13-217ENST00000482647 CACNG5Q9UF02 275 aa16.08■□□□□ 0.16
SEC13-217ENST00000482647 DMRT1Q9Y5R6 373 aa16.08■□□□□ 0.16
SEC13-217ENST00000482647 TRBV7-1A0A0A6YYK4 115 aa16.07■□□□□ 0.16
SEC13-217ENST00000482647 SFT2D2O95562 160 aa16.07■□□□□ 0.16
SEC13-217ENST00000482647 TRBV12-3P01733 135 aa16.07■□□□□ 0.16
SEC13-217ENST00000482647 PPP1R1AQ13522 171 aa16.07■□□□□ 0.16
SEC13-217ENST00000482647 AARDQ4LEZ3 155 aa16.07■□□□□ 0.16
SEC13-217ENST00000482647 C9orf66Q5T8R8 295 aa16.07■□□□□ 0.16
SEC13-217ENST00000482647 LYZL2Q7Z4W2 148 aa16.07■□□□□ 0.16
SEC13-217ENST00000482647 OR52E5Q8NH55 327 aa16.07■□□□□ 0.16
SEC13-217ENST00000482647 ENY2Q9NPA8 101 aa16.07■□□□□ 0.16
SEC13-217ENST00000482647 DUXBA0A1W2PPF3 345 aa16.06■□□□□ 0.16
SEC13-217ENST00000482647 INS-IGF2F8WCM5 200 aa16.06■□□□□ 0.16
SEC13-217ENST00000482647 IGHV3-23P01764 117 aa16.06■□□□□ 0.16
SEC13-217ENST00000482647 SULT1A3P0DMM9 295 aa16.06■□□□□ 0.16
SEC13-217ENST00000482647 SULT1A4P0DMN0 295 aa16.06■□□□□ 0.16
SEC13-217ENST00000482647 SNCAP37840 140 aa16.06■□□□□ 0.16
SEC13-217ENST00000482647 SPCS3P61009 180 aa16.06■□□□□ 0.16
SEC13-217ENST00000482647 KLF5Q13887 457 aaPredicted RBP16.06■□□□□ 0.16
SEC13-217ENST00000482647 TATDN3Q17R31 274 aa16.06■□□□□ 0.16
SEC13-217ENST00000482647 RPEL1Q2QD12 228 aa16.06■□□□□ 0.16
SEC13-217ENST00000482647 SPINK9Q5DT21 86 aa16.06■□□□□ 0.16
SEC13-217ENST00000482647 LRTM2Q8N967 370 aa16.06■□□□□ 0.16
SEC13-217ENST00000482647 VN1R17PQ8TDU5 208 aa16.06■□□□□ 0.16
SEC13-217ENST00000482647 ZMAT5Q9UDW3 170 aaKnown RBP16.06■□□□□ 0.16
SEC13-217ENST00000482647 FLVCR2Q9UPI3 526 aa16.06■□□□□ 0.16
SEC13-217ENST00000482647 HOXA1P49639 335 aaPredicted RBP16.05■□□□□ 0.16
SEC13-217ENST00000482647 INSL3P51460 131 aa16.05■□□□□ 0.16
SEC13-217ENST00000482647 MFAP2P55001 183 aa16.05■□□□□ 0.16
SEC13-217ENST00000482647 NMSQ5H8A3 153 aa16.05■□□□□ 0.16
SEC13-217ENST00000482647 CLEC19AQ6UXS0 136 aa16.05■□□□□ 0.16
SEC13-217ENST00000482647 ZNF114Q8NC26 417 aa16.05■□□□□ 0.16
SEC13-217ENST00000482647 S4R3C0 116 aa16.05■□□□□ 0.16
SEC13-217ENST00000482647 MFSD2BA6NFX1 497 aa16.04■□□□□ 0.16
SEC13-217ENST00000482647 BMPR1BO00238 502 aa16.04■□□□□ 0.16
SEC13-217ENST00000482647 WIPF1O43516 503 aa16.04■□□□□ 0.16
SEC13-217ENST00000482647 CLEC3BP05452 202 aa16.04■□□□□ 0.16
SEC13-217ENST00000482647 ANKRD55Q3KP44 614 aa16.04■□□□□ 0.16
SEC13-217ENST00000482647 PDLIM3Q53GG5 364 aaPredicted RBP16.04■□□□□ 0.16
SEC13-217ENST00000482647 CCDC140Q96MF4 163 aa16.04■□□□□ 0.16
SEC13-217ENST00000482647 ELOVL1Q9BW60 279 aa16.04■□□□□ 0.16
SEC13-217ENST00000482647 C9orf170A2RU37 121 aa16.03■□□□□ 0.16
SEC13-217ENST00000482647 PPP5D1E7EU14 171 aa16.03■□□□□ 0.16
SEC13-217ENST00000482647 GGCTO75223 188 aaKnown RBP16.03■□□□□ 0.16
SEC13-217ENST00000482647 ANXA7P20073 488 aaKnown RBP16.03■□□□□ 0.16
SEC13-217ENST00000482647 SUB1P53999 127 aaKnown RBP eCLIP16.03■□□□□ 0.16
SEC13-217ENST00000482647 SYNJ2BPP57105 145 aa16.03■□□□□ 0.16
SEC13-217ENST00000482647 EGFEM1PQ0D2K5 195 aa16.03■□□□□ 0.16
SEC13-217ENST00000482647 SMCO1Q147U7 214 aa16.03■□□□□ 0.16
SEC13-217ENST00000482647 MZT2BQ6NZ67 158 aa16.03■□□□□ 0.16
SEC13-217ENST00000482647 ZNF502Q8TBZ5 544 aa16.03■□□□□ 0.16
SEC13-217ENST00000482647 A0A1B0GU03 582 aa16.02■□□□□ 0.16
SEC13-217ENST00000482647 UPK1BO75841 260 aa16.02■□□□□ 0.16
SEC13-217ENST00000482647 HLA-AP01891 365 aaKnown RBP16.02■□□□□ 0.16
SEC13-217ENST00000482647 OR4E1P0C645 316 aa16.02■□□□□ 0.16
SEC13-217ENST00000482647 ARL3P36405 182 aa16.02■□□□□ 0.16
SEC13-217ENST00000482647 C4orf46Q504U0 113 aa16.02■□□□□ 0.16
SEC13-217ENST00000482647 ACSM6Q6P461 480 aa16.02■□□□□ 0.16
SEC13-217ENST00000482647 REC114Q7Z4M0 266 aa16.02■□□□□ 0.16
SEC13-217ENST00000482647 SCARB1Q8WTV0 552 aa16.02■□□□□ 0.16
SEC13-217ENST00000482647 MISP3Q96FF7 219 aa16.02■□□□□ 0.16
SEC13-217ENST00000482647 OR4C12Q96R67 309 aa16.02■□□□□ 0.16
SEC13-217ENST00000482647 TMED3Q9Y3Q3 217 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms