RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 LAMTOR1Q6IAA8 161 aa9.08□□□□□ -0.96
SQSTM1-207ENST00000481335 SCARB1Q8WTV0 552 aa9.08□□□□□ -0.96
SQSTM1-207ENST00000481335 C15orf40Q8WUR7 153 aa9.08□□□□□ -0.96
SQSTM1-207ENST00000481335 TXN2Q99757 166 aa9.08□□□□□ -0.96
SQSTM1-207ENST00000481335 WFDC10AQ9H1F0 79 aa9.08□□□□□ -0.96
SQSTM1-207ENST00000481335 COMMD3Q9UBI1 195 aa9.08□□□□□ -0.96
SQSTM1-207ENST00000481335 OR2T8A6NH00 312 aa9.07□□□□□ -0.96
SQSTM1-207ENST00000481335 K7EIM0 57 aa9.07□□□□□ -0.96
SQSTM1-207ENST00000481335 JTBO76095 146 aa9.07□□□□□ -0.96
SQSTM1-207ENST00000481335 SCAF4O95104 1147 aaKnown RBP9.07□□□□□ -0.96
SQSTM1-207ENST00000481335 TBPP20226 339 aa9.07□□□□□ -0.96
SQSTM1-207ENST00000481335 RORCP51449 518 aa9.07□□□□□ -0.96
SQSTM1-207ENST00000481335 NCS1P62166 190 aa9.07□□□□□ -0.96
SQSTM1-207ENST00000481335 RELQ04864 619 aaPredicted RBP9.07□□□□□ -0.96
SQSTM1-207ENST00000481335 MZT2AQ6P582 158 aa9.07□□□□□ -0.96
SQSTM1-207ENST00000481335 H2BFWTQ7Z2G1 175 aa9.07□□□□□ -0.96
SQSTM1-207ENST00000481335 TBC1D26Q86UD7 250 aa9.07□□□□□ -0.96
SQSTM1-207ENST00000481335 ARRDC1Q8N5I2 433 aa9.07□□□□□ -0.96
SQSTM1-207ENST00000481335 OR2C3Q8N628 320 aa9.07□□□□□ -0.96
SQSTM1-207ENST00000481335 SEC22AQ96IW7 307 aa9.07□□□□□ -0.96
SQSTM1-207ENST00000481335 HINT2Q9BX68 163 aa9.07□□□□□ -0.96
SQSTM1-207ENST00000481335 RETNQ9HD89 108 aa9.07□□□□□ -0.96
SQSTM1-207ENST00000481335 TP53TG1Q9Y2A0 90 aa9.07□□□□□ -0.96
SQSTM1-207ENST00000481335 DNAH1Q9P2D7 4330 aa9.07□□□□□ -0.96
SQSTM1-207ENST00000481335 OR4C46A6NHA9 309 aa9.06□□□□□ -0.96
SQSTM1-207ENST00000481335 F8W735 103 aaPredicted RBP9.06□□□□□ -0.96
SQSTM1-207ENST00000481335 UBE2CO00762 179 aa9.06□□□□□ -0.96
SQSTM1-207ENST00000481335 ATG12O94817 140 aa9.06□□□□□ -0.96
SQSTM1-207ENST00000481335 MFAP2P55001 183 aa9.06□□□□□ -0.96
SQSTM1-207ENST00000481335 APOC4P55056 127 aa9.06□□□□□ -0.96
SQSTM1-207ENST00000481335 RND3P61587 244 aa9.06□□□□□ -0.96
SQSTM1-207ENST00000481335 VBP1P61758 197 aa9.06□□□□□ -0.96
SQSTM1-207ENST00000481335 PRCDQ00LT1 54 aa9.06□□□□□ -0.96
SQSTM1-207ENST00000481335 PHLDA2Q53GA4 152 aa9.06□□□□□ -0.96
SQSTM1-207ENST00000481335 Q6ZWC4 215 aa9.06□□□□□ -0.96
SQSTM1-207ENST00000481335 WFDC3Q8IUB2 231 aa9.06□□□□□ -0.96
SQSTM1-207ENST00000481335 OR4A16Q8NH70 328 aa9.06□□□□□ -0.96
SQSTM1-207ENST00000481335 NSG2Q9Y328 171 aa9.06□□□□□ -0.96
SQSTM1-207ENST00000481335 IGHV3-35A0A0C4DH35 117 aa9.05□□□□□ -0.96
SQSTM1-207ENST00000481335 KIR2DL5BA0A0G2JN68 375 aa9.05□□□□□ -0.96
SQSTM1-207ENST00000481335 KIR2DL5BA0A0G2JPC4 375 aa9.05□□□□□ -0.96
SQSTM1-207ENST00000481335 INS-IGF2F8WCM5 200 aa9.05□□□□□ -0.96
SQSTM1-207ENST00000481335 NUPL2O15504 423 aaKnown RBP9.05□□□□□ -0.96
SQSTM1-207ENST00000481335 B3GALNT1O75752 331 aa9.05□□□□□ -0.96
SQSTM1-207ENST00000481335 GABARAPO95166 117 aa9.05□□□□□ -0.96
SQSTM1-207ENST00000481335 CD5P06127 495 aa9.05□□□□□ -0.96
SQSTM1-207ENST00000481335 ELK1P19419 428 aa9.05□□□□□ -0.96
SQSTM1-207ENST00000481335 Q56UQ5 140 aa9.05□□□□□ -0.96
SQSTM1-207ENST00000481335 RNASE10Q5GAN6 216 aaKnown RBP9.05□□□□□ -0.96
SQSTM1-207ENST00000481335 SNX29P2Q8IUI4 249 aa9.05□□□□□ -0.96
SQSTM1-207ENST00000481335 KIR2DL5AQ8N109 375 aa9.05□□□□□ -0.96
SQSTM1-207ENST00000481335 KIR2DL5BQ8NHK3 375 aa9.05□□□□□ -0.96
SQSTM1-207ENST00000481335 OR10C1Q96KK4 312 aa9.05□□□□□ -0.96
SQSTM1-207ENST00000481335 HPGDSO60760 199 aa9.04□□□□□ -0.96
SQSTM1-207ENST00000481335 CTSGP08311 255 aa9.04□□□□□ -0.96
SQSTM1-207ENST00000481335 ATF4P18848 351 aaPredicted RBP9.04□□□□□ -0.96
SQSTM1-207ENST00000481335 BMI1P35226 326 aa9.04□□□□□ -0.96
SQSTM1-207ENST00000481335 ADMP35318 185 aa9.04□□□□□ -0.96
SQSTM1-207ENST00000481335 MFAP4P55083 255 aa9.04□□□□□ -0.96
SQSTM1-207ENST00000481335 CMC4P56277 68 aaPredicted RBP9.04□□□□□ -0.96
SQSTM1-207ENST00000481335 HSPE1P61604 102 aaKnown RBP9.04□□□□□ -0.96
SQSTM1-207ENST00000481335 ERHP84090 104 aaKnown RBP9.04□□□□□ -0.96
SQSTM1-207ENST00000481335 LHFPL1Q86WI0 220 aa9.04□□□□□ -0.96
SQSTM1-207ENST00000481335 UBAC2Q8NBM4 344 aa9.04□□□□□ -0.96
SQSTM1-207ENST00000481335 MRGPRFQ96AM1 343 aa9.04□□□□□ -0.96
SQSTM1-207ENST00000481335 OVOL2Q9BRP0 275 aa9.04□□□□□ -0.96
SQSTM1-207ENST00000481335 CHRDL1Q9BU40 450 aa9.04□□□□□ -0.96
SQSTM1-207ENST00000481335 DBX1A6NMT0 343 aa9.03□□□□□ -0.96
SQSTM1-207ENST00000481335 FAM25AB3EWG3 89 aa9.03□□□□□ -0.96
SQSTM1-207ENST00000481335 FAM25CB3EWG5 89 aa9.03□□□□□ -0.96
SQSTM1-207ENST00000481335 FAM25GB3EWG6 89 aa9.03□□□□□ -0.96
SQSTM1-207ENST00000481335 I3L2K1 104 aa9.03□□□□□ -0.96
SQSTM1-207ENST00000481335 CORTO00230 105 aa9.03□□□□□ -0.96
SQSTM1-207ENST00000481335 IGKV1-39P01597 117 aa9.03□□□□□ -0.96
SQSTM1-207ENST00000481335 IGKV1D-39P04432 117 aa9.03□□□□□ -0.96
SQSTM1-207ENST00000481335 ZNF182P17025 639 aaPredicted RBP9.03□□□□□ -0.96
SQSTM1-207ENST00000481335 SSBP1Q04837 148 aaKnown RBP9.03□□□□□ -0.96
SQSTM1-207ENST00000481335 GINS3Q9BRX5 216 aa9.03□□□□□ -0.96
SQSTM1-207ENST00000481335 C20orf24Q9BUV8 137 aa9.03□□□□□ -0.96
SQSTM1-207ENST00000481335 C6orf62Q9GZU0 229 aaPredicted RBP9.03□□□□□ -0.96
SQSTM1-207ENST00000481335 MTFP1Q9UDX5 166 aa9.03□□□□□ -0.96
SQSTM1-207ENST00000481335 IGHV7-4-1A0A0J9YVY3 117 aa9.02□□□□□ -0.97
SQSTM1-207ENST00000481335 GNG7O60262 68 aa9.02□□□□□ -0.97
SQSTM1-207ENST00000481335 NPBWR1P48145 328 aa9.02□□□□□ -0.97
SQSTM1-207ENST00000481335 PIGPP57054 158 aa9.02□□□□□ -0.97
SQSTM1-207ENST00000481335 MRPS10P82664 201 aaKnown RBP9.02□□□□□ -0.97
SQSTM1-207ENST00000481335 TNFRSF9Q07011 255 aa9.02□□□□□ -0.97
SQSTM1-207ENST00000481335 CTF1Q16619 201 aa9.02□□□□□ -0.97
SQSTM1-207ENST00000481335 ODF3L2Q3SX64 289 aa9.02□□□□□ -0.97
SQSTM1-207ENST00000481335 CCDC71LQ8N9Z2 235 aa9.02□□□□□ -0.97
SQSTM1-207ENST00000481335 ZFAND1Q8TCF1 268 aa9.02□□□□□ -0.97
SQSTM1-207ENST00000481335 MISP3Q96FF7 219 aa9.02□□□□□ -0.97
SQSTM1-207ENST00000481335 GALNT14Q96FL9 552 aa9.02□□□□□ -0.97
SQSTM1-207ENST00000481335 PDCD10Q9BUL8 212 aa9.02□□□□□ -0.97
SQSTM1-207ENST00000481335 NXF2Q9GZY0 626 aaKnown RBP9.02□□□□□ -0.97
SQSTM1-207ENST00000481335 RABL2AQ9UBK7 228 aaPredicted RBP9.02□□□□□ -0.97
SQSTM1-207ENST00000481335 SMPXQ9UHP9 88 aa9.02□□□□□ -0.97
SQSTM1-207ENST00000481335 RABL2BQ9UNT1 228 aa9.02□□□□□ -0.97
SQSTM1-207ENST00000481335 IGHV3-21A0A0B4J1V1 117 aa9.01□□□□□ -0.97
SQSTM1-207ENST00000481335 M0QYG6 137 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms