RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 IFNA10P01566 189 aa2.94□□□□□ -1.94
COPA-203ENST00000481040 LGALS1P09382 135 aaKnown RBP2.94□□□□□ -1.94
COPA-203ENST00000481040 CD24P25063 80 aa2.94□□□□□ -1.94
COPA-203ENST00000481040 HLA-DMBP28068 263 aa2.94□□□□□ -1.94
COPA-203ENST00000481040 CA5AP35218 305 aa2.94□□□□□ -1.94
COPA-203ENST00000481040 ATP5G3P48201 142 aa2.94□□□□□ -1.94
COPA-203ENST00000481040 RHOBP62745 196 aa2.94□□□□□ -1.94
COPA-203ENST00000481040 MIAQ16674 131 aa2.94□□□□□ -1.94
COPA-203ENST00000481040 DEFB134Q4QY38 66 aa2.94□□□□□ -1.94
COPA-203ENST00000481040 PRR9Q5T870 116 aa2.94□□□□□ -1.94
COPA-203ENST00000481040 FGF13Q92913 245 aa2.94□□□□□ -1.94
COPA-203ENST00000481040 SH3BGRL3Q9H299 93 aa2.94□□□□□ -1.94
COPA-203ENST00000481040 MIXL1Q9H2W2 232 aa2.94□□□□□ -1.94
COPA-203ENST00000481040 TMEM235A6NFC5 223 aa2.93□□□□□ -1.94
COPA-203ENST00000481040 CLDN25C9JDP6 229 aa2.93□□□□□ -1.94
COPA-203ENST00000481040 RTL8CO15255 209 aa2.93□□□□□ -1.94
COPA-203ENST00000481040 NDUFC2O95298 119 aa2.93□□□□□ -1.94
COPA-203ENST00000481040 C1QAP02745 245 aa2.93□□□□□ -1.94
COPA-203ENST00000481040 CRHP06850 196 aa2.93□□□□□ -1.94
COPA-203ENST00000481040 TFPTP0C1Z6 253 aa2.93□□□□□ -1.94
COPA-203ENST00000481040 CCL5P13501 91 aa2.93□□□□□ -1.94
COPA-203ENST00000481040 HIST1H4AP62805 103 aaKnown RBP2.93□□□□□ -1.94
COPA-203ENST00000481040 MEF2BQ02080 365 aaPredicted RBP2.93□□□□□ -1.94
COPA-203ENST00000481040 RPL18Q07020 188 aaKnown RBP2.93□□□□□ -1.94
COPA-203ENST00000481040 PYDC2Q56P42 97 aa2.93□□□□□ -1.94
COPA-203ENST00000481040 IGFL1Q6UW32 110 aa2.93□□□□□ -1.94
COPA-203ENST00000481040 C2orf50Q96LR7 162 aa2.93□□□□□ -1.94
COPA-203ENST00000481040 OR8D2Q9GZM6 311 aa2.93□□□□□ -1.94
COPA-203ENST00000481040 MRPL16Q9NX20 251 aaKnown RBP2.93□□□□□ -1.94
COPA-203ENST00000481040 SSR3Q9UNL2 185 aa2.93□□□□□ -1.94
COPA-203ENST00000481040 RBM7Q9Y580 266 aaKnown RBP2.93□□□□□ -1.94
COPA-203ENST00000481040 MINOS1-NBL1R4GNA1 71 aa2.93□□□□□ -1.94
COPA-203ENST00000481040 PLXND1Q9Y4D7 1925 aa2.92□□□□□ -1.94
COPA-203ENST00000481040 TRBV19A0A075B6N1 114 aa2.92□□□□□ -1.94
COPA-203ENST00000481040 H7C1C5 153 aa2.92□□□□□ -1.94
COPA-203ENST00000481040 ZNF728P0DKX0 622 aa2.92□□□□□ -1.94
COPA-203ENST00000481040 ALDH3A1P30838 453 aa2.92□□□□□ -1.94
COPA-203ENST00000481040 LCN6P62502 163 aa2.92□□□□□ -1.94
COPA-203ENST00000481040 RHEBQ15382 184 aa2.92□□□□□ -1.94
COPA-203ENST00000481040 ZNF705AQ6ZN79 300 aaPredicted RBP2.92□□□□□ -1.94
COPA-203ENST00000481040 ZNF767PQ75MW2 155 aa2.92□□□□□ -1.94
COPA-203ENST00000481040 OR5C1Q8NGR4 320 aa2.92□□□□□ -1.94
COPA-203ENST00000481040 OR10K1Q8NGX5 313 aa2.92□□□□□ -1.94
COPA-203ENST00000481040 GPER1Q99527 375 aa2.92□□□□□ -1.94
COPA-203ENST00000481040 PBDC1Q9BVG4 233 aa2.92□□□□□ -1.94
COPA-203ENST00000481040 C19orf12Q9NSK7 152 aa2.92□□□□□ -1.94
COPA-203ENST00000481040 ACER3Q9NUN7 267 aa2.92□□□□□ -1.94
COPA-203ENST00000481040 NDUFAF1Q9Y375 327 aa2.92□□□□□ -1.94
COPA-203ENST00000481040 HSPE1-MOB4S4R3N1 261 aa2.92□□□□□ -1.94
COPA-203ENST00000481040 MED1Q15648 1581 aaPredicted RBP2.91□□□□□ -1.94
COPA-203ENST00000481040 ZNF106Q9H2Y7 1883 aaKnown RBP2.91□□□□□ -1.94
COPA-203ENST00000481040 TRAV41A0A0B4J266 112 aa2.91□□□□□ -1.94
COPA-203ENST00000481040 FABP5P3A8MUU1 101 aa2.91□□□□□ -1.94
COPA-203ENST00000481040 J3QRK9 145 aa2.91□□□□□ -1.94
COPA-203ENST00000481040 OR2J2O76002 312 aa2.91□□□□□ -1.94
COPA-203ENST00000481040 IFNA7P01567 189 aa2.91□□□□□ -1.94
COPA-203ENST00000481040 ZNF80P51504 273 aaPredicted RBP2.91□□□□□ -1.94
COPA-203ENST00000481040 IGFBP7Q16270 282 aa2.91□□□□□ -1.94
COPA-203ENST00000481040 LCE3EQ5T5B0 92 aa2.91□□□□□ -1.94
COPA-203ENST00000481040 ZNF439Q8NDP4 499 aa2.91□□□□□ -1.94
COPA-203ENST00000481040 PYDC1Q8WXC3 89 aa2.91□□□□□ -1.94
COPA-203ENST00000481040 FAM215AQ9Y5M1 114 aa2.91□□□□□ -1.94
COPA-203ENST00000481040 A0A0J9YW62 118 aa2.9□□□□□ -1.95
COPA-203ENST00000481040 LOC105371267A0A1B0GV96 52 aa2.9□□□□□ -1.95
COPA-203ENST00000481040 C11orf86A6NJI1 115 aa2.9□□□□□ -1.95
COPA-203ENST00000481040 BUB1B-PAK6H3BSN5 160 aa2.9□□□□□ -1.95
COPA-203ENST00000481040 AIPO00170 330 aa2.9□□□□□ -1.95
COPA-203ENST00000481040 IGHV3-7P01780 117 aa2.9□□□□□ -1.95
COPA-203ENST00000481040 BPGMP07738 259 aa2.9□□□□□ -1.95
COPA-203ENST00000481040 UCHL1P09936 223 aa2.9□□□□□ -1.95
COPA-203ENST00000481040 GZMHP20718 246 aa2.9□□□□□ -1.95
COPA-203ENST00000481040 G6PCP35575 357 aa2.9□□□□□ -1.95
COPA-203ENST00000481040 PIGPP57054 158 aa2.9□□□□□ -1.95
COPA-203ENST00000481040 ALX1Q15699 326 aa2.9□□□□□ -1.95
COPA-203ENST00000481040 CMTM2Q8TAZ6 248 aa2.9□□□□□ -1.95
COPA-203ENST00000481040 IMMP2LQ96T52 175 aa2.9□□□□□ -1.95
COPA-203ENST00000481040 CHST6Q9GZX3 395 aa2.9□□□□□ -1.95
COPA-203ENST00000481040 TIMM22Q9Y584 194 aa2.9□□□□□ -1.95
COPA-203ENST00000481040 YTHDC2Q9H6S0 1430 aaKnown RBP2.9□□□□□ -1.95
COPA-203ENST00000481040 SHANK1Q9Y566 2161 aa2.9□□□□□ -1.95
COPA-203ENST00000481040 NISCHQ9Y2I1 1504 aa2.89□□□□□ -1.95
COPA-203ENST00000481040 TRAV38-1A0A0B4J264 116 aa2.89□□□□□ -1.95
COPA-203ENST00000481040 A0A1W2PNM2 257 aa2.89□□□□□ -1.95
COPA-203ENST00000481040 IRGMA1A4Y4 181 aa2.89□□□□□ -1.95
COPA-203ENST00000481040 TRAPPC2LH3BP13 241 aa2.89□□□□□ -1.95
COPA-203ENST00000481040 H3BT86 120 aa2.89□□□□□ -1.95
COPA-203ENST00000481040 GNRH2O43555 120 aa2.89□□□□□ -1.95
COPA-203ENST00000481040 MSNP26038 577 aaKnown RBP2.89□□□□□ -1.95
COPA-203ENST00000481040 CASP1P29466 404 aa2.89□□□□□ -1.95
COPA-203ENST00000481040 GLRXP35754 106 aa2.89□□□□□ -1.95
COPA-203ENST00000481040 CCR2P41597 374 aa2.89□□□□□ -1.95
COPA-203ENST00000481040 GABRA4P48169 554 aa2.89□□□□□ -1.95
COPA-203ENST00000481040 CDC42P60953 191 aa2.89□□□□□ -1.95
COPA-203ENST00000481040 SPANXN3Q5MJ09 141 aa2.89□□□□□ -1.95
COPA-203ENST00000481040 LCA10Q71F78 164 aa2.89□□□□□ -1.95
COPA-203ENST00000481040 PHF13Q86YI8 300 aaPredicted RBP2.89□□□□□ -1.95
COPA-203ENST00000481040 EXOC3-AS1Q8N2X6 119 aa2.89□□□□□ -1.95
COPA-203ENST00000481040 LYSMD1Q96S90 227 aa2.89□□□□□ -1.95
COPA-203ENST00000481040 TMEM70Q9BUB7 260 aa2.89□□□□□ -1.95
COPA-203ENST00000481040 AMMECR1Q9Y4X0 333 aaPredicted RBP2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms