RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 GRPEL2Q8TAA5 225 aa9.52□□□□□ -0.89
PTPRF-213ENST00000481019 ABHD5Q8WTS1 349 aa9.52□□□□□ -0.89
PTPRF-213ENST00000481019 ARPC1AQ92747 370 aa9.52□□□□□ -0.89
PTPRF-213ENST00000481019 RAX2Q96IS3 184 aa9.52□□□□□ -0.89
PTPRF-213ENST00000481019 CIB3Q96Q77 187 aaPredicted RBP9.52□□□□□ -0.89
PTPRF-213ENST00000481019 OR4F4Q96R69 305 aa9.52□□□□□ -0.89
PTPRF-213ENST00000481019 BET1LQ9NYM9 111 aa9.52□□□□□ -0.89
PTPRF-213ENST00000481019 PRNDQ9UKY0 176 aa9.52□□□□□ -0.89
PTPRF-213ENST00000481019 NSG2Q9Y328 171 aa9.52□□□□□ -0.89
PTPRF-213ENST00000481019 A0A1W2PN81 502 aa9.51□□□□□ -0.89
PTPRF-213ENST00000481019 L7N2F9 121 aa9.51□□□□□ -0.89
PTPRF-213ENST00000481019 IGKV1-39P01597 117 aa9.51□□□□□ -0.89
PTPRF-213ENST00000481019 IGKV1-5P01602 117 aa9.51□□□□□ -0.89
PTPRF-213ENST00000481019 IGKV1D-39P04432 117 aa9.51□□□□□ -0.89
PTPRF-213ENST00000481019 ELANEP08246 267 aa9.51□□□□□ -0.89
PTPRF-213ENST00000481019 APELAP0DMC3 54 aa9.51□□□□□ -0.89
PTPRF-213ENST00000481019 PF4V1P10720 104 aa9.51□□□□□ -0.89
PTPRF-213ENST00000481019 CHRNA7P36544 502 aa9.51□□□□□ -0.89
PTPRF-213ENST00000481019 S100A10P60903 97 aa9.51□□□□□ -0.89
PTPRF-213ENST00000481019 VAMP2P63027 116 aa9.51□□□□□ -0.89
PTPRF-213ENST00000481019 RPP30P78346 268 aaKnown RBP9.51□□□□□ -0.89
PTPRF-213ENST00000481019 UNQ5815/PRO19632Q6UWF5 114 aa9.51□□□□□ -0.89
PTPRF-213ENST00000481019 ZNF546Q86UE3 836 aa9.51□□□□□ -0.89
PTPRF-213ENST00000481019 ZNF429Q86V71 674 aa9.51□□□□□ -0.89
PTPRF-213ENST00000481019 TEX45Q8NA69 505 aa9.51□□□□□ -0.89
PTPRF-213ENST00000481019 OR4D5Q8NGN0 318 aa9.51□□□□□ -0.89
PTPRF-213ENST00000481019 OR52E5Q8NH55 327 aa9.51□□□□□ -0.89
PTPRF-213ENST00000481019 RAB40CQ96S21 281 aa9.51□□□□□ -0.89
PTPRF-213ENST00000481019 ZNF430Q9H8G1 570 aaPredicted RBP9.51□□□□□ -0.89
PTPRF-213ENST00000481019 CACNG5Q9UF02 275 aa9.51□□□□□ -0.89
PTPRF-213ENST00000481019 TRAV3A0A0B4J244 114 aa9.5□□□□□ -0.89
PTPRF-213ENST00000481019 A0A0D9SG52 128 aa9.5□□□□□ -0.89
PTPRF-213ENST00000481019 A0A1B0GW64 132 aa9.5□□□□□ -0.89
PTPRF-213ENST00000481019 MPTX1A8MV57 137 aa9.5□□□□□ -0.89
PTPRF-213ENST00000481019 NUDT19A8MXV4 375 aa9.5□□□□□ -0.89
PTPRF-213ENST00000481019 E7EUB6 86 aa9.5□□□□□ -0.89
PTPRF-213ENST00000481019 PITX3O75364 302 aa9.5□□□□□ -0.89
PTPRF-213ENST00000481019 SCGB1D2O95969 90 aa9.5□□□□□ -0.89
PTPRF-213ENST00000481019 MAS1LP35410 378 aa9.5□□□□□ -0.89
PTPRF-213ENST00000481019 RAB9AP51151 201 aa9.5□□□□□ -0.89
PTPRF-213ENST00000481019 TAS2R30P59541 319 aa9.5□□□□□ -0.89
PTPRF-213ENST00000481019 DEFA5Q01523 94 aa9.5□□□□□ -0.89
PTPRF-213ENST00000481019 OR2F1Q13607 317 aa9.5□□□□□ -0.89
PTPRF-213ENST00000481019 RAB32Q13637 225 aa9.5□□□□□ -0.89
PTPRF-213ENST00000481019 LRRC37A5PQ49AS3 106 aa9.5□□□□□ -0.89
PTPRF-213ENST00000481019 OXLD1Q5BKU9 147 aa9.5□□□□□ -0.89
PTPRF-213ENST00000481019 CXorf66Q5JRM2 361 aaPredicted RBP9.5□□□□□ -0.89
PTPRF-213ENST00000481019 SAMD5Q5TGI4 173 aa9.5□□□□□ -0.89
PTPRF-213ENST00000481019 SSX9Q7RTT3 188 aa9.5□□□□□ -0.89
PTPRF-213ENST00000481019 PUSL1Q8N0Z8 303 aaKnown RBP9.5□□□□□ -0.89
PTPRF-213ENST00000481019 LINC00482Q8N8I6 264 aa9.5□□□□□ -0.89
PTPRF-213ENST00000481019 ZNF491Q8N8L2 437 aa9.5□□□□□ -0.89
PTPRF-213ENST00000481019 OR5T1Q8NG75 326 aa9.5□□□□□ -0.89
PTPRF-213ENST00000481019 WDR89Q96FK6 387 aaPredicted RBP9.5□□□□□ -0.89
PTPRF-213ENST00000481019 MS4A10Q96PG2 267 aa9.5□□□□□ -0.89
PTPRF-213ENST00000481019 OR5B12Q96R08 314 aa9.5□□□□□ -0.89
PTPRF-213ENST00000481019 GON7Q9BXV9 100 aa9.5□□□□□ -0.89
PTPRF-213ENST00000481019 SLC25A31Q9H0C2 315 aa9.5□□□□□ -0.89
PTPRF-213ENST00000481019 TMEM140Q9NV12 185 aa9.5□□□□□ -0.89
PTPRF-213ENST00000481019 FOXA2Q9Y261 457 aaPredicted RBP9.5□□□□□ -0.89
PTPRF-213ENST00000481019 FXYD6-FXYD2A0A087WZ82 144 aa9.49□□□□□ -0.89
PTPRF-213ENST00000481019 SYNGR2O43760 224 aa9.49□□□□□ -0.89
PTPRF-213ENST00000481019 DEDDO75618 318 aa9.49□□□□□ -0.89
PTPRF-213ENST00000481019 ACTL6BO94805 426 aa9.49□□□□□ -0.89
PTPRF-213ENST00000481019 CNIH1O95406 144 aa9.49□□□□□ -0.89
PTPRF-213ENST00000481019 IFNA17P01571 189 aa9.49□□□□□ -0.89
PTPRF-213ENST00000481019 MBPP02686 304 aaPredicted RBP9.49□□□□□ -0.89
PTPRF-213ENST00000481019 P0C879 139 aa9.49□□□□□ -0.89
PTPRF-213ENST00000481019 LYL1P12980 280 aa9.49□□□□□ -0.89
PTPRF-213ENST00000481019 IGLL1P15814 213 aa9.49□□□□□ -0.89
PTPRF-213ENST00000481019 P2RY1P47900 373 aa9.49□□□□□ -0.89
PTPRF-213ENST00000481019 CDX1P47902 265 aaPredicted RBP9.49□□□□□ -0.89
PTPRF-213ENST00000481019 ATP5IP56385 69 aaPredicted RBP9.49□□□□□ -0.89
PTPRF-213ENST00000481019 SPCS3P61009 180 aa9.49□□□□□ -0.89
PTPRF-213ENST00000481019 TNXAQ16473 311 aa9.49□□□□□ -0.89
PTPRF-213ENST00000481019 AARDQ4LEZ3 155 aa9.49□□□□□ -0.89
PTPRF-213ENST00000481019 AKIRIN2Q53H80 203 aa9.49□□□□□ -0.89
PTPRF-213ENST00000481019 OR4A47Q6IF82 309 aa9.49□□□□□ -0.89
PTPRF-213ENST00000481019 C19orf35Q6ZS72 473 aa9.49□□□□□ -0.89
PTPRF-213ENST00000481019 ACOT7LQ6ZUV0 252 aa9.49□□□□□ -0.89
PTPRF-213ENST00000481019 WFDC9Q8NEX5 89 aa9.49□□□□□ -0.89
PTPRF-213ENST00000481019 OR5B3Q8NH48 314 aa9.49□□□□□ -0.89
PTPRF-213ENST00000481019 P2RX4Q99571 388 aa9.49□□□□□ -0.89
PTPRF-213ENST00000481019 HIPK2Q9H2X6 1198 aa9.49□□□□□ -0.89
PTPRF-213ENST00000481019 ENY2Q9NPA8 101 aa9.49□□□□□ -0.89
PTPRF-213ENST00000481019 ZNF257Q9Y2Q1 563 aa9.49□□□□□ -0.89
PTPRF-213ENST00000481019 LSM5Q9Y4Y9 91 aaKnown RBP9.49□□□□□ -0.89
PTPRF-213ENST00000481019 DNAH9Q9NYC9 4486 aa9.48□□□□□ -0.89
PTPRF-213ENST00000481019 MSGN1A6NI15 193 aa9.48□□□□□ -0.89
PTPRF-213ENST00000481019 CGB1A6NKQ9 187 aa9.48□□□□□ -0.89
PTPRF-213ENST00000481019 I3L521 148 aa9.48□□□□□ -0.89
PTPRF-213ENST00000481019 K7EPK0 472 aa9.48□□□□□ -0.89
PTPRF-213ENST00000481019 UPK2O00526 184 aa9.48□□□□□ -0.89
PTPRF-213ENST00000481019 KBTBD11O94819 623 aa9.48□□□□□ -0.89
PTPRF-213ENST00000481019 PF4P02776 101 aa9.48□□□□□ -0.89
PTPRF-213ENST00000481019 PRB2P02812 416 aaPredicted RBP9.48□□□□□ -0.89
PTPRF-213ENST00000481019 HSPE1P61604 102 aaKnown RBP9.48□□□□□ -0.89
PTPRF-213ENST00000481019 RPL8P62917 257 aaKnown RBP9.48□□□□□ -0.89
PTPRF-213ENST00000481019 TNFRSF9Q07011 255 aa9.48□□□□□ -0.89
PTPRF-213ENST00000481019 CD300CQ08708 224 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms