RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 DGCR14Q96DF8 476 aaKnown RBP5.33□□□□□ -1.56
COL17A1-205ENST00000480127 BSCL2Q96G97 398 aaPredicted RBP5.33□□□□□ -1.56
COL17A1-205ENST00000480127 NARS2Q96I59 477 aaKnown RBP5.33□□□□□ -1.56
COL17A1-205ENST00000480127 MRPL27Q9P0M9 148 aaKnown RBP5.33□□□□□ -1.56
COL17A1-205ENST00000480127 ALMS1Q8TCU4 4167 aa5.33□□□□□ -1.56
COL17A1-205ENST00000480127 PCLOQ9Y6V0 5065 aa5.33□□□□□ -1.56
COL17A1-205ENST00000480127 IGLV11-55A0A075B6I3 123 aa5.32□□□□□ -1.56
COL17A1-205ENST00000480127 TRAV25A0A0B4J276 109 aa5.32□□□□□ -1.56
COL17A1-205ENST00000480127 TEX50A0A1B0GTY4 177 aa5.32□□□□□ -1.56
COL17A1-205ENST00000480127 IGLC7A0M8Q6 106 aa5.32□□□□□ -1.56
COL17A1-205ENST00000480127 TMEM213A2RRL7 107 aa5.32□□□□□ -1.56
COL17A1-205ENST00000480127 A8MWP6 167 aa5.32□□□□□ -1.56
COL17A1-205ENST00000480127 E7EUB6 86 aa5.32□□□□□ -1.56
COL17A1-205ENST00000480127 GNG7O60262 68 aa5.32□□□□□ -1.56
COL17A1-205ENST00000480127 PGLYRP1O75594 196 aaPredicted RBP5.32□□□□□ -1.56
COL17A1-205ENST00000480127 LY6G6CO95867 125 aa5.32□□□□□ -1.56
COL17A1-205ENST00000480127 IFNA17P01571 189 aa5.32□□□□□ -1.56
COL17A1-205ENST00000480127 IGLV2-14P01704 120 aa5.32□□□□□ -1.56
COL17A1-205ENST00000480127 EDN2P20800 178 aa5.32□□□□□ -1.56
COL17A1-205ENST00000480127 RCVRNP35243 200 aa5.32□□□□□ -1.56
COL17A1-205ENST00000480127 HOXA1P49639 335 aaPredicted RBP5.32□□□□□ -1.56
COL17A1-205ENST00000480127 DEFB135Q30KP9 77 aa5.32□□□□□ -1.56
COL17A1-205ENST00000480127 RNASE10Q5GAN6 216 aaKnown RBP5.32□□□□□ -1.56
COL17A1-205ENST00000480127 OR5B3Q8NH48 314 aa5.32□□□□□ -1.56
COL17A1-205ENST00000480127 ZNF502Q8TBZ5 544 aa5.32□□□□□ -1.56
COL17A1-205ENST00000480127 FCAMRQ8WWV6 532 aa5.32□□□□□ -1.56
COL17A1-205ENST00000480127 AP3S1Q92572 193 aa5.32□□□□□ -1.56
COL17A1-205ENST00000480127 SLC25A46Q96AG3 418 aa5.32□□□□□ -1.56
COL17A1-205ENST00000480127 MOB3AQ96BX8 217 aa5.32□□□□□ -1.56
COL17A1-205ENST00000480127 RRNAD1Q96FB5 475 aaKnown RBP5.32□□□□□ -1.56
COL17A1-205ENST00000480127 FANCD2OSQ96PS1 177 aa5.32□□□□□ -1.56
COL17A1-205ENST00000480127 SPAG8Q99932 426 aaPredicted RBP5.32□□□□□ -1.56
COL17A1-205ENST00000480127 GINS3Q9BRX5 216 aa5.32□□□□□ -1.56
COL17A1-205ENST00000480127 MLXQ9UH92 298 aa5.32□□□□□ -1.56
COL17A1-205ENST00000480127 F11RQ9Y624 299 aaKnown RBP5.32□□□□□ -1.56
COL17A1-205ENST00000480127 IGHV3-49A0A0A0MS15 119 aa5.31□□□□□ -1.56
COL17A1-205ENST00000480127 NDUFA4O00483 81 aa5.31□□□□□ -1.56
COL17A1-205ENST00000480127 RGS5O15539 181 aa5.31□□□□□ -1.56
COL17A1-205ENST00000480127 SPRY2O43597 315 aa5.31□□□□□ -1.56
COL17A1-205ENST00000480127 FGF2P09038 288 aa5.31□□□□□ -1.56
COL17A1-205ENST00000480127 GNRHRP30968 328 aa5.31□□□□□ -1.56
COL17A1-205ENST00000480127 TGFBR1P36897 503 aa5.31□□□□□ -1.56
COL17A1-205ENST00000480127 RPS19P39019 145 aaKnown RBP5.31□□□□□ -1.56
COL17A1-205ENST00000480127 RORCP51449 518 aa5.31□□□□□ -1.56
COL17A1-205ENST00000480127 SUB1P53999 127 aaKnown RBP eCLIP5.31□□□□□ -1.56
COL17A1-205ENST00000480127 MFAP4P55083 255 aa5.31□□□□□ -1.56
COL17A1-205ENST00000480127 ELLP55199 621 aaPredicted RBP5.31□□□□□ -1.56
COL17A1-205ENST00000480127 SCGB2B2Q4G0G5 96 aa5.31□□□□□ -1.56
COL17A1-205ENST00000480127 SPINK9Q5DT21 86 aa5.31□□□□□ -1.56
COL17A1-205ENST00000480127 UNQ9165/PRO28630Q6UXU0 137 aa5.31□□□□□ -1.56
COL17A1-205ENST00000480127 TBC1D26Q86UD7 250 aa5.31□□□□□ -1.56
COL17A1-205ENST00000480127 WFDC3Q8IUB2 231 aa5.31□□□□□ -1.56
COL17A1-205ENST00000480127 GBGT1Q8N5D6 347 aa5.31□□□□□ -1.56
COL17A1-205ENST00000480127 TMEM116Q8NCL8 245 aa5.31□□□□□ -1.56
COL17A1-205ENST00000480127 TMEM190Q8WZ59 177 aa5.31□□□□□ -1.56
COL17A1-205ENST00000480127 C5orf66Q9H5L9 145 aa5.31□□□□□ -1.56
COL17A1-205ENST00000480127 SCPEP1Q9HB40 452 aa5.31□□□□□ -1.56
COL17A1-205ENST00000480127 COPZ2Q9P299 210 aa5.31□□□□□ -1.56
COL17A1-205ENST00000480127 RABAC1Q9UI14 185 aa5.31□□□□□ -1.56
COL17A1-205ENST00000480127 KLK5Q9Y337 293 aaPredicted RBP5.31□□□□□ -1.56
COL17A1-205ENST00000480127 IGHV3OR16-13A0A075B7E8 117 aa5.3□□□□□ -1.56
COL17A1-205ENST00000480127 IGHV3-74A0A0B4J1X5 117 aa5.3□□□□□ -1.56
COL17A1-205ENST00000480127 TEX13DA0A0J9YY54 714 aaPredicted RBP5.3□□□□□ -1.56
COL17A1-205ENST00000480127 A0A1B0GW64 132 aa5.3□□□□□ -1.56
COL17A1-205ENST00000480127 NUPR2A6NF83 97 aa5.3□□□□□ -1.56
COL17A1-205ENST00000480127 M0QYG6 137 aa5.3□□□□□ -1.56
COL17A1-205ENST00000480127 UBE2CO00762 179 aa5.3□□□□□ -1.56
COL17A1-205ENST00000480127 ST8SIA3O43173 380 aa5.3□□□□□ -1.56
COL17A1-205ENST00000480127 NOL3O60936 208 aaKnown RBP5.3□□□□□ -1.56
COL17A1-205ENST00000480127 IGHV3-48P01763 117 aa5.3□□□□□ -1.56
COL17A1-205ENST00000480127 APOA1P02647 267 aa5.3□□□□□ -1.56
COL17A1-205ENST00000480127 CTSDP07339 412 aaPredicted RBP5.3□□□□□ -1.56
COL17A1-205ENST00000480127 NPBWR1P48145 328 aa5.3□□□□□ -1.56
COL17A1-205ENST00000480127 EIF2B2P49770 351 aaKnown RBP5.3□□□□□ -1.56
COL17A1-205ENST00000480127 PPP5CP53041 499 aa5.3□□□□□ -1.56
COL17A1-205ENST00000480127 CMC4P56277 68 aaPredicted RBP5.3□□□□□ -1.56
COL17A1-205ENST00000480127 VBP1P61758 197 aa5.3□□□□□ -1.56
COL17A1-205ENST00000480127 WT1-ASQ06250 92 aa5.3□□□□□ -1.56
COL17A1-205ENST00000480127 EIF4EBP1Q13541 118 aaPredicted RBP5.3□□□□□ -1.56
COL17A1-205ENST00000480127 DHRS11Q6UWP2 260 aa5.3□□□□□ -1.56
COL17A1-205ENST00000480127 CCDC71LQ8N9Z2 235 aa5.3□□□□□ -1.56
COL17A1-205ENST00000480127 DUSP18Q8NEJ0 188 aa5.3□□□□□ -1.56
COL17A1-205ENST00000480127 OR1P1Q8NH06 330 aa5.3□□□□□ -1.56
COL17A1-205ENST00000480127 SCARB1Q8WTV0 552 aa5.3□□□□□ -1.56
COL17A1-205ENST00000480127 MRGPRFQ96AM1 343 aa5.3□□□□□ -1.56
COL17A1-205ENST00000480127 FXYD6Q9H0Q3 95 aa5.3□□□□□ -1.56
COL17A1-205ENST00000480127 TMEM231Q9H6L2 316 aa5.3□□□□□ -1.56
COL17A1-205ENST00000480127 NDUFA4L2Q9NRX3 87 aa5.3□□□□□ -1.56
COL17A1-205ENST00000480127 C14orf166Q9Y224 244 aaKnown RBP5.3□□□□□ -1.56
COL17A1-205ENST00000480127 TRAV14DV4A0A0A6YYC5 116 aa5.29□□□□□ -1.56
COL17A1-205ENST00000480127 A0A0J9YWU9 116 aa5.29□□□□□ -1.56
COL17A1-205ENST00000480127 C15orf61A6NNL5 157 aa5.29□□□□□ -1.56
COL17A1-205ENST00000480127 C15orf62A8K5M9 175 aa5.29□□□□□ -1.56
COL17A1-205ENST00000480127 TSPAN4O14817 238 aa5.29□□□□□ -1.56
COL17A1-205ENST00000480127 HPGDSO60760 199 aa5.29□□□□□ -1.56
COL17A1-205ENST00000480127 MT-CO2P00403 227 aa5.29□□□□□ -1.56
COL17A1-205ENST00000480127 IFNA4P05014 189 aa5.29□□□□□ -1.56
COL17A1-205ENST00000480127 OPRK1P41145 380 aa5.29□□□□□ -1.56
COL17A1-205ENST00000480127 BRWD1-AS2P59051 145 aa5.29□□□□□ -1.56
COL17A1-205ENST00000480127 POU2AF1Q16633 256 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms