RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 FHL3Q13643 280 aa6.92□□□□□ -1.3
DDX56-211ENST00000479602 KIAA0141Q14154 515 aaPredicted RBP6.92□□□□□ -1.3
DDX56-211ENST00000479602 TMEM95Q3KNT9 176 aa6.92□□□□□ -1.3
DDX56-211ENST00000479602 Q6ZRM9 215 aa6.92□□□□□ -1.3
DDX56-211ENST00000479602 LYZL2Q7Z4W2 148 aa6.92□□□□□ -1.3
DDX56-211ENST00000479602 NOXA1Q86UR1 476 aa6.92□□□□□ -1.3
DDX56-211ENST00000479602 C12orf45Q8N5I9 185 aaPredicted RBP6.92□□□□□ -1.3
DDX56-211ENST00000479602 OR4D5Q8NGN0 318 aa6.92□□□□□ -1.3
DDX56-211ENST00000479602 MRAPQ8TCY5 172 aa6.92□□□□□ -1.3
DDX56-211ENST00000479602 GPR146Q96CH1 333 aa6.92□□□□□ -1.3
DDX56-211ENST00000479602 PARP11Q9NR21 331 aa6.92□□□□□ -1.3
DDX56-211ENST00000479602 CACNG5Q9UF02 275 aa6.92□□□□□ -1.3
DDX56-211ENST00000479602 OR51B2Q9Y5P1 312 aa6.92□□□□□ -1.3
DDX56-211ENST00000479602 TSSC4Q9Y5U2 329 aaPredicted RBP6.92□□□□□ -1.3
DDX56-211ENST00000479602 F11RQ9Y624 299 aaKnown RBP6.92□□□□□ -1.3
DDX56-211ENST00000479602 TRAV3A0A0B4J244 114 aa6.91□□□□□ -1.3
DDX56-211ENST00000479602 A0A0G2JLM5 398 aa6.91□□□□□ -1.3
DDX56-211ENST00000479602 LINC00854A0A1B0GVQ3 168 aa6.91□□□□□ -1.3
DDX56-211ENST00000479602 MSGN1A6NI15 193 aa6.91□□□□□ -1.3
DDX56-211ENST00000479602 LINC01548A6NM66 108 aa6.91□□□□□ -1.3
DDX56-211ENST00000479602 E7EUB6 86 aa6.91□□□□□ -1.3
DDX56-211ENST00000479602 ST8SIA3O43173 380 aa6.91□□□□□ -1.3
DDX56-211ENST00000479602 MED6O75586 246 aa6.91□□□□□ -1.3
DDX56-211ENST00000479602 HTR2BP41595 481 aa6.91□□□□□ -1.3
DDX56-211ENST00000479602 RPL23AP62750 156 aaKnown RBP6.91□□□□□ -1.3
DDX56-211ENST00000479602 CYCSP99999 105 aaKnown RBP6.91□□□□□ -1.3
DDX56-211ENST00000479602 WT1-ASQ06250 92 aa6.91□□□□□ -1.3
DDX56-211ENST00000479602 TATDN3Q17R31 274 aa6.91□□□□□ -1.3
DDX56-211ENST00000479602 C2orf83Q53S99 150 aa6.91□□□□□ -1.3
DDX56-211ENST00000479602 CXorf66Q5JRM2 361 aaPredicted RBP6.91□□□□□ -1.3
DDX56-211ENST00000479602 GGNBP1Q5YKI7 109 aa6.91□□□□□ -1.3
DDX56-211ENST00000479602 UNQ5815/PRO19632Q6UWF5 114 aa6.91□□□□□ -1.3
DDX56-211ENST00000479602 SSX9Q7RTT3 188 aa6.91□□□□□ -1.3
DDX56-211ENST00000479602 NECAP1Q8NC96 275 aa6.91□□□□□ -1.3
DDX56-211ENST00000479602 LFNGQ8NES3 379 aa6.91□□□□□ -1.3
DDX56-211ENST00000479602 VN1R17PQ8TDU5 208 aa6.91□□□□□ -1.3
DDX56-211ENST00000479602 C4orf3Q8WVX3 66 aa6.91□□□□□ -1.3
DDX56-211ENST00000479602 PDCD10Q9BUL8 212 aa6.91□□□□□ -1.3
DDX56-211ENST00000479602 NMES1Q9C002 83 aa6.91□□□□□ -1.3
DDX56-211ENST00000479602 PLEKHA3Q9HB20 300 aa6.91□□□□□ -1.3
DDX56-211ENST00000479602 THYN1Q9P016 225 aa6.91□□□□□ -1.3
DDX56-211ENST00000479602 U3KQ87 197 aa6.91□□□□□ -1.3
DDX56-211ENST00000479602 DNAH1Q9P2D7 4330 aa6.9□□□□□ -1.3
DDX56-211ENST00000479602 RAB9AP51151 201 aa6.9□□□□□ -1.3
DDX56-211ENST00000479602 EXOSC2Q13868 293 aaKnown RBP6.9□□□□□ -1.3
DDX56-211ENST00000479602 ARSJQ5FYB0 599 aaPredicted RBP6.9□□□□□ -1.3
DDX56-211ENST00000479602 C9orf152Q5JTZ5 239 aa6.9□□□□□ -1.3
DDX56-211ENST00000479602 C10orf55Q5SWW7 151 aa6.9□□□□□ -1.3
DDX56-211ENST00000479602 C10orf99Q6UWK7 81 aa6.9□□□□□ -1.3
DDX56-211ENST00000479602 CENPVQ7Z7K6 275 aaPredicted RBP6.9□□□□□ -1.3
DDX56-211ENST00000479602 LINC00482Q8N8I6 264 aa6.9□□□□□ -1.3
DDX56-211ENST00000479602 ZNF491Q8N8L2 437 aa6.9□□□□□ -1.3
DDX56-211ENST00000479602 RNASE11Q8TAA1 199 aaKnown RBP6.9□□□□□ -1.3
DDX56-211ENST00000479602 GRPEL2Q8TAA5 225 aa6.9□□□□□ -1.3
DDX56-211ENST00000479602 RNASEH2CQ8TDP1 164 aaKnown RBP6.9□□□□□ -1.3
DDX56-211ENST00000479602 CXorf58Q96LI9 332 aa6.9□□□□□ -1.3
DDX56-211ENST00000479602 NOL4LQ96MY1 436 aaPredicted RBP6.9□□□□□ -1.3
DDX56-211ENST00000479602 FANCD2OSQ96PS1 177 aa6.9□□□□□ -1.3
DDX56-211ENST00000479602 GAR1Q9NY12 217 aaKnown RBP6.9□□□□□ -1.3
DDX56-211ENST00000479602 WSB1Q9Y6I7 421 aa6.9□□□□□ -1.3
DDX56-211ENST00000479602 WI2-2373I1.2A0A1W2PRP0 233 aa6.89□□□□□ -1.31
DDX56-211ENST00000479602 FNDC10F2Z333 226 aa6.89□□□□□ -1.31
DDX56-211ENST00000479602 G3V318 75 aa6.89□□□□□ -1.31
DDX56-211ENST00000479602 I3L521 148 aa6.89□□□□□ -1.31
DDX56-211ENST00000479602 SUB1P53999 127 aaKnown RBP eCLIP6.89□□□□□ -1.31
DDX56-211ENST00000479602 ERHP84090 104 aaKnown RBP6.89□□□□□ -1.31
DDX56-211ENST00000479602 ECSCRQ19T08 205 aa6.89□□□□□ -1.31
DDX56-211ENST00000479602 ZNF343Q6P1L6 599 aa6.89□□□□□ -1.31
DDX56-211ENST00000479602 ETV3LQ6ZN32 361 aa6.89□□□□□ -1.31
DDX56-211ENST00000479602 ZBTB8BQ8NAP8 495 aaPredicted RBP6.89□□□□□ -1.31
DDX56-211ENST00000479602 CASTOR1Q8WTX7 329 aa6.89□□□□□ -1.31
DDX56-211ENST00000479602 RCC1LQ96I51 464 aaKnown RBP6.89□□□□□ -1.31
DDX56-211ENST00000479602 C2orf50Q96LR7 162 aa6.89□□□□□ -1.31
DDX56-211ENST00000479602 RAB40CQ96S21 281 aa6.89□□□□□ -1.31
DDX56-211ENST00000479602 TXN2Q99757 166 aa6.89□□□□□ -1.31
DDX56-211ENST00000479602 SEC22CQ9BRL7 303 aa6.89□□□□□ -1.31
DDX56-211ENST00000479602 TRBV7-1A0A0A6YYK4 115 aa6.88□□□□□ -1.31
DDX56-211ENST00000479602 TCRBV4S1A1TA0A5B7 111 aa6.88□□□□□ -1.31
DDX56-211ENST00000479602 SH2D7A6NKC9 451 aaPredicted RBP6.88□□□□□ -1.31
DDX56-211ENST00000479602 SYNGR2O43760 224 aa6.88□□□□□ -1.31
DDX56-211ENST00000479602 TSC22D2O75157 780 aa6.88□□□□□ -1.31
DDX56-211ENST00000479602 ADAP1O75689 374 aa6.88□□□□□ -1.31
DDX56-211ENST00000479602 IFNA17P01571 189 aa6.88□□□□□ -1.31
DDX56-211ENST00000479602 LGALS1P09382 135 aaKnown RBP6.88□□□□□ -1.31
DDX56-211ENST00000479602 RNASE2P10153 161 aaKnown RBP6.88□□□□□ -1.31
DDX56-211ENST00000479602 AREGP15514 252 aa6.88□□□□□ -1.31
DDX56-211ENST00000479602 NKX2-1P43699 371 aaPredicted RBP6.88□□□□□ -1.31
DDX56-211ENST00000479602 IAH1Q2TAA2 248 aaPredicted RBP6.88□□□□□ -1.31
DDX56-211ENST00000479602 TMEM65Q6PI78 240 aa6.88□□□□□ -1.31
DDX56-211ENST00000479602 SLC24A4Q8NFF2 622 aa6.88□□□□□ -1.31
DDX56-211ENST00000479602 OR52B4Q8NGK2 314 aa6.88□□□□□ -1.31
DDX56-211ENST00000479602 DTD1Q8TEA8 209 aa6.88□□□□□ -1.31
DDX56-211ENST00000479602 ABHD5Q8WTS1 349 aa6.88□□□□□ -1.31
DDX56-211ENST00000479602 CHAC2Q8WUX2 184 aa6.88□□□□□ -1.31
DDX56-211ENST00000479602 CACNG8Q8WXS5 425 aa6.88□□□□□ -1.31
DDX56-211ENST00000479602 RBMXL1Q96E39 390 aaKnown RBP6.88□□□□□ -1.31
DDX56-211ENST00000479602 SMIM8Q96KF7 97 aa6.88□□□□□ -1.31
DDX56-211ENST00000479602 OR10C1Q96KK4 312 aa6.88□□□□□ -1.31
DDX56-211ENST00000479602 CLCC1Q96S66 551 aa6.88□□□□□ -1.31
DDX56-211ENST00000479602 P2RX4Q99571 388 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms