RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 ARL11Q969Q4 196 aa2.92□□□□□ -1.94
VPS50-214ENST00000477935 OR52B2Q96RD2 323 aa2.92□□□□□ -1.94
VPS50-214ENST00000477935 AMELYQ99218 206 aa2.92□□□□□ -1.94
VPS50-214ENST00000477935 CNN2Q99439 309 aaKnown RBP2.92□□□□□ -1.94
VPS50-214ENST00000477935 SULT4A1Q9BR01 284 aa2.92□□□□□ -1.94
VPS50-214ENST00000477935 CHRDL1Q9BU40 450 aa2.92□□□□□ -1.94
VPS50-214ENST00000477935 PARP12Q9H0J9 701 aaKnown RBP2.92□□□□□ -1.94
VPS50-214ENST00000477935 MAGT1Q9H0U3 335 aa2.92□□□□□ -1.94
VPS50-214ENST00000477935 FAM206AQ9NX38 181 aa2.92□□□□□ -1.94
VPS50-214ENST00000477935 ENOPH1Q9UHY7 261 aa2.92□□□□□ -1.94
VPS50-214ENST00000477935 BAIAP2Q9UQB8 552 aa2.92□□□□□ -1.94
VPS50-214ENST00000477935 ENPP4Q9Y6X5 453 aa2.92□□□□□ -1.94
VPS50-214ENST00000477935 IGKV1-27A0A075B6S5 117 aa2.91□□□□□ -1.94
VPS50-214ENST00000477935 OR5H14A6NHG9 310 aa2.91□□□□□ -1.94
VPS50-214ENST00000477935 C15orf65H3BRN8 121 aa2.91□□□□□ -1.94
VPS50-214ENST00000477935 FADS2O95864 444 aaKnown RBP2.91□□□□□ -1.94
VPS50-214ENST00000477935 GYPBP06028 91 aa2.91□□□□□ -1.94
VPS50-214ENST00000477935 ALOX5APP20292 161 aa2.91□□□□□ -1.94
VPS50-214ENST00000477935 PRKACBP22694 351 aa2.91□□□□□ -1.94
VPS50-214ENST00000477935 CASQ1P31415 396 aa2.91□□□□□ -1.94
VPS50-214ENST00000477935 ASIPP42127 132 aa2.91□□□□□ -1.94
VPS50-214ENST00000477935 CT45A1Q5HYN5 189 aa2.91□□□□□ -1.94
VPS50-214ENST00000477935 SAMD4BQ5PRF9 694 aaKnown RBP2.91□□□□□ -1.94
VPS50-214ENST00000477935 FAM71F2Q6NXP2 309 aa2.91□□□□□ -1.94
VPS50-214ENST00000477935 TMEM179BQ7Z7N9 219 aa2.91□□□□□ -1.94
VPS50-214ENST00000477935 SAXO1Q8IYX7 474 aa2.91□□□□□ -1.94
VPS50-214ENST00000477935 NECAP1Q8NC96 275 aa2.91□□□□□ -1.94
VPS50-214ENST00000477935 ZNF439Q8NDP4 499 aa2.91□□□□□ -1.94
VPS50-214ENST00000477935 MNS1Q8NEH6 495 aa2.91□□□□□ -1.94
VPS50-214ENST00000477935 OR10H4Q8NGA5 316 aa2.91□□□□□ -1.94
VPS50-214ENST00000477935 OR8J3Q8NGG0 315 aa2.91□□□□□ -1.94
VPS50-214ENST00000477935 ZNRF2Q8NHG8 242 aa2.91□□□□□ -1.94
VPS50-214ENST00000477935 CT45A3Q8NHU0 189 aa2.91□□□□□ -1.94
VPS50-214ENST00000477935 KCNG3Q8TAE7 436 aa2.91□□□□□ -1.94
VPS50-214ENST00000477935 PP6455Q8WZ26 134 aa2.91□□□□□ -1.94
VPS50-214ENST00000477935 TSNAXQ99598 290 aaKnown RBP2.91□□□□□ -1.94
VPS50-214ENST00000477935 ZNF184Q99676 751 aaPredicted RBP2.91□□□□□ -1.94
VPS50-214ENST00000477935 CHST5Q9GZS9 411 aa2.91□□□□□ -1.94
VPS50-214ENST00000477935 NEK6Q9HC98 313 aa2.91□□□□□ -1.94
VPS50-214ENST00000477935 SMPD3Q9NY59 655 aaPredicted RBP2.91□□□□□ -1.94
VPS50-214ENST00000477935 COA4Q9NYJ1 87 aa2.91□□□□□ -1.94
VPS50-214ENST00000477935 IL20Q9NYY1 176 aa2.91□□□□□ -1.94
VPS50-214ENST00000477935 GNG12Q9UBI6 72 aa2.91□□□□□ -1.94
VPS50-214ENST00000477935 METTL1Q9UBP6 276 aaKnown RBP2.91□□□□□ -1.94
VPS50-214ENST00000477935 ZNF230Q9UIE0 474 aaPredicted RBP2.91□□□□□ -1.94
VPS50-214ENST00000477935 LAMP5Q9UJQ1 280 aa2.91□□□□□ -1.94
VPS50-214ENST00000477935 TRBV9A0A0B4J1U6 114 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 A0A1B0GTI1 187 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 A0A1B0GW64 132 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 TMEM30CPA0ZSE6 113 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 A6NIN4 97 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 RIIAD1A6NNX1 92 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 H0YJX3 145 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 SULT1B1O43704 296 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 SSX5O60225 188 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 SNNO75324 88 aaPredicted RBP2.9□□□□□ -1.95
VPS50-214ENST00000477935 CA2P00918 260 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 NPPAP01160 153 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 TTRP02766 147 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 SPART-AS1P0CW21 52 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 CALCBP10092 127 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 DBTP11182 482 aaKnown RBP2.9□□□□□ -1.95
VPS50-214ENST00000477935 ZNF3P17036 446 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 CCL1P22362 96 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 GSSP48637 474 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 CRISP1P54107 249 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 CCL18P55774 89 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 RPL8P62917 257 aaKnown RBP2.9□□□□□ -1.95
VPS50-214ENST00000477935 RHOGP84095 191 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 TSPAN31Q12999 210 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 CDK5R1Q15078 307 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 PTGES3Q15185 160 aaKnown RBP2.9□□□□□ -1.95
VPS50-214ENST00000477935 PSG5Q15238 335 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 LY6G6FQ5SQ64 297 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 EPGNQ6UW88 154 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 ZNF833PQ6ZTB9 187 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 VTCN1Q7Z7D3 282 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 ZNF679Q8IYX0 411 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 BBS1Q8NFJ9 593 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 OR2T33Q8NG76 320 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 GRPEL2Q8TAA5 225 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 CNIH3Q8TBE1 160 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 GNPDA2Q8TDQ7 276 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 ASB17Q8WXJ9 295 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 CACNG8Q8WXS5 425 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 CLCC1Q96S66 551 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 TMEM70Q9BUB7 260 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 ROPN1BQ9BZX4 212 aaPredicted RBP2.9□□□□□ -1.95
VPS50-214ENST00000477935 LGALS13Q9UHV8 139 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 ZNF221Q9UK13 617 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 AP3M1Q9Y2T2 418 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 UFC1Q9Y3C8 167 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 TMEM14AQ9Y6G1 99 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 FSIP2Q5CZC0 6907 aa2.9□□□□□ -1.95
VPS50-214ENST00000477935 A0A0U1RQV1 116 aa2.89□□□□□ -1.95
VPS50-214ENST00000477935 TMEM189A5PLL7 270 aa2.89□□□□□ -1.95
VPS50-214ENST00000477935 FAM74A7A6NL05 159 aa2.89□□□□□ -1.95
VPS50-214ENST00000477935 H7C2Y5 167 aa2.89□□□□□ -1.95
VPS50-214ENST00000477935 SLC31A2O15432 143 aa2.89□□□□□ -1.95
VPS50-214ENST00000477935 ZNF682O95780 498 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms