RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 GPR107Q5VW38 600 aa11.82□□□□□ -0.52
CLDN11-204ENST00000477531 ZFAND6Q6FIF0 208 aa11.82□□□□□ -0.52
CLDN11-204ENST00000477531 LINC00322Q6ZN03 302 aaPredicted RBP11.82□□□□□ -0.52
CLDN11-204ENST00000477531 UBAC2Q8NBM4 344 aa11.82□□□□□ -0.52
CLDN11-204ENST00000477531 ZNF436Q9C0F3 470 aaPredicted RBP11.82□□□□□ -0.52
CLDN11-204ENST00000477531 TMEM14BQ9NUH8 114 aa11.82□□□□□ -0.52
CLDN11-204ENST00000477531 EXTL2Q9UBQ6 330 aa11.82□□□□□ -0.52
CLDN11-204ENST00000477531 IGHV3-21A0A0B4J1V1 117 aa11.81□□□□□ -0.52
CLDN11-204ENST00000477531 RBMY1BA6NDE4 496 aaKnown RBP11.81□□□□□ -0.52
CLDN11-204ENST00000477531 RBMY1EA6NEQ0 496 aaKnown RBP11.81□□□□□ -0.52
CLDN11-204ENST00000477531 M0QYG6 137 aa11.81□□□□□ -0.52
CLDN11-204ENST00000477531 RBMY1DP0C7P1 496 aaKnown RBP11.81□□□□□ -0.52
CLDN11-204ENST00000477531 C8orf88P0DMB2 117 aa11.81□□□□□ -0.52
CLDN11-204ENST00000477531 Q56UQ5 140 aa11.81□□□□□ -0.52
CLDN11-204ENST00000477531 RNASE12Q5GAN4 147 aaKnown RBP11.81□□□□□ -0.52
CLDN11-204ENST00000477531 LAMTOR1Q6IAA8 161 aa11.81□□□□□ -0.52
CLDN11-204ENST00000477531 CLVS1Q8IUQ0 354 aaPredicted RBP11.81□□□□□ -0.52
CLDN11-204ENST00000477531 OR1P1Q8NH06 330 aa11.81□□□□□ -0.52
CLDN11-204ENST00000477531 SCARB1Q8WTV0 552 aa11.81□□□□□ -0.52
CLDN11-204ENST00000477531 RAB2BQ8WUD1 216 aa11.81□□□□□ -0.52
CLDN11-204ENST00000477531 TMEM190Q8WZ59 177 aa11.81□□□□□ -0.52
CLDN11-204ENST00000477531 ZNF486Q96H40 463 aaPredicted RBP11.81□□□□□ -0.52
CLDN11-204ENST00000477531 WFDC10AQ9H1F0 79 aa11.81□□□□□ -0.52
CLDN11-204ENST00000477531 HIPK2Q9H2X6 1198 aa11.81□□□□□ -0.52
CLDN11-204ENST00000477531 NDUFA4O00483 81 aa11.8□□□□□ -0.52
CLDN11-204ENST00000477531 ATG12O94817 140 aa11.8□□□□□ -0.52
CLDN11-204ENST00000477531 TBPP20226 339 aa11.8□□□□□ -0.52
CLDN11-204ENST00000477531 TMBIM6P55061 237 aa11.8□□□□□ -0.52
CLDN11-204ENST00000477531 ERHP84090 104 aaKnown RBP11.8□□□□□ -0.52
CLDN11-204ENST00000477531 CTF1Q16619 201 aa11.8□□□□□ -0.52
CLDN11-204ENST00000477531 IL17DQ8TAD2 202 aa11.8□□□□□ -0.52
CLDN11-204ENST00000477531 SEC22AQ96IW7 307 aa11.8□□□□□ -0.52
CLDN11-204ENST00000477531 C20orf24Q9BUV8 137 aa11.8□□□□□ -0.52
CLDN11-204ENST00000477531 NAA50Q9GZZ1 169 aaKnown RBP11.8□□□□□ -0.52
CLDN11-204ENST00000477531 C5orf66Q9H5L9 145 aa11.8□□□□□ -0.52
CLDN11-204ENST00000477531 DAZ1Q9NQZ3 744 aaKnown RBP11.8□□□□□ -0.52
CLDN11-204ENST00000477531 KLK11Q9UBX7 282 aa11.8□□□□□ -0.52
CLDN11-204ENST00000477531 NUPL2O15504 423 aaKnown RBP11.79□□□□□ -0.52
CLDN11-204ENST00000477531 MFAP2P55001 183 aa11.79□□□□□ -0.52
CLDN11-204ENST00000477531 MFAP4P55083 255 aa11.79□□□□□ -0.52
CLDN11-204ENST00000477531 RND3P61587 244 aa11.79□□□□□ -0.52
CLDN11-204ENST00000477531 HSPE1P61604 102 aaKnown RBP11.79□□□□□ -0.52
CLDN11-204ENST00000477531 RELQ04864 619 aaPredicted RBP11.79□□□□□ -0.52
CLDN11-204ENST00000477531 ARRDC1Q8N5I2 433 aa11.79□□□□□ -0.52
CLDN11-204ENST00000477531 OR2C3Q8N628 320 aa11.79□□□□□ -0.52
CLDN11-204ENST00000477531 OR52I2Q8NH67 350 aa11.79□□□□□ -0.52
CLDN11-204ENST00000477531 ZFAND1Q8TCF1 268 aa11.79□□□□□ -0.52
CLDN11-204ENST00000477531 MRGPRFQ96AM1 343 aa11.79□□□□□ -0.52
CLDN11-204ENST00000477531 MISP3Q96FF7 219 aa11.79□□□□□ -0.52
CLDN11-204ENST00000477531 RETNQ9HD89 108 aa11.79□□□□□ -0.52
CLDN11-204ENST00000477531 MTFP1Q9UDX5 166 aa11.79□□□□□ -0.52
CLDN11-204ENST00000477531 DYNC2H1Q8NCM8 4307 aaKnown RBP11.79□□□□□ -0.52
CLDN11-204ENST00000477531 LOC102724200A0A096LPH7 203 aaPredicted RBP11.78□□□□□ -0.52
CLDN11-204ENST00000477531 DBX1A6NMT0 343 aa11.78□□□□□ -0.52
CLDN11-204ENST00000477531 K7EIM0 57 aa11.78□□□□□ -0.52
CLDN11-204ENST00000477531 CD3DP04234 171 aa11.78□□□□□ -0.52
CLDN11-204ENST00000477531 PIGPP57054 158 aa11.78□□□□□ -0.52
CLDN11-204ENST00000477531 PRCDQ00LT1 54 aa11.78□□□□□ -0.52
CLDN11-204ENST00000477531 CCDC71LQ8N9Z2 235 aa11.78□□□□□ -0.52
CLDN11-204ENST00000477531 SPAG8Q99932 426 aaPredicted RBP11.78□□□□□ -0.52
CLDN11-204ENST00000477531 FAM110AQ9BQ89 295 aa11.78□□□□□ -0.52
CLDN11-204ENST00000477531 GGTLC1Q9BX51 225 aa11.78□□□□□ -0.52
CLDN11-204ENST00000477531 COPZ2Q9P299 210 aa11.78□□□□□ -0.52
CLDN11-204ENST00000477531 K7EMT4 169 aa11.77□□□□□ -0.53
CLDN11-204ENST00000477531 RGS5O15539 181 aa11.77□□□□□ -0.53
CLDN11-204ENST00000477531 IGKV1-39P01597 117 aa11.77□□□□□ -0.53
CLDN11-204ENST00000477531 IGKV1D-39P04432 117 aa11.77□□□□□ -0.53
CLDN11-204ENST00000477531 PI3P19957 117 aa11.77□□□□□ -0.53
CLDN11-204ENST00000477531 AKR1C2P52895 323 aa11.77□□□□□ -0.53
CLDN11-204ENST00000477531 TAS2R19P59542 299 aa11.77□□□□□ -0.53
CLDN11-204ENST00000477531 TMEM229BQ8NBD8 167 aa11.77□□□□□ -0.53
CLDN11-204ENST00000477531 TXN2Q99757 166 aa11.77□□□□□ -0.53
CLDN11-204ENST00000477531 CHRDL1Q9BU40 450 aa11.77□□□□□ -0.53
CLDN11-204ENST00000477531 PDCD10Q9BUL8 212 aa11.77□□□□□ -0.53
CLDN11-204ENST00000477531 NDUFA13Q9P0J0 144 aa11.77□□□□□ -0.53
CLDN11-204ENST00000477531 C3orf85A0A1B0GTC6 90 aa11.76□□□□□ -0.53
CLDN11-204ENST00000477531 CCDC160A6NGH7 325 aa11.76□□□□□ -0.53
CLDN11-204ENST00000477531 C15orf62A8K5M9 175 aa11.76□□□□□ -0.53
CLDN11-204ENST00000477531 TSPAN4O14817 238 aa11.76□□□□□ -0.53
CLDN11-204ENST00000477531 YIF1AO95070 293 aa11.76□□□□□ -0.53
CLDN11-204ENST00000477531 RAB3DO95716 219 aa11.76□□□□□ -0.53
CLDN11-204ENST00000477531 SNCAP37840 140 aa11.76□□□□□ -0.53
CLDN11-204ENST00000477531 PPP5CP53041 499 aa11.76□□□□□ -0.53
CLDN11-204ENST00000477531 MRPS10P82664 201 aaKnown RBP11.76□□□□□ -0.53
CLDN11-204ENST00000477531 TRIM16LQ309B1 348 aa11.76□□□□□ -0.53
CLDN11-204ENST00000477531 SCGB2B2Q4G0G5 96 aa11.76□□□□□ -0.53
CLDN11-204ENST00000477531 LHFPL1Q86WI0 220 aa11.76□□□□□ -0.53
CLDN11-204ENST00000477531 SLC35G3Q8N808 338 aa11.76□□□□□ -0.53
CLDN11-204ENST00000477531 ZNF114Q8NC26 417 aa11.76□□□□□ -0.53
CLDN11-204ENST00000477531 TERB2Q8NHR7 220 aa11.76□□□□□ -0.53
CLDN11-204ENST00000477531 PINX1Q96BK5 328 aaKnown RBP11.76□□□□□ -0.53
CLDN11-204ENST00000477531 ABHD1Q96SE0 405 aa11.76□□□□□ -0.53
CLDN11-204ENST00000477531 GABARAPH6UMI1 98 aa11.75□□□□□ -0.53
CLDN11-204ENST00000477531 ZNF701M0R085 212 aaPredicted RBP11.75□□□□□ -0.53
CLDN11-204ENST00000477531 ZNF207O43670 478 aaKnown RBP11.75□□□□□ -0.53
CLDN11-204ENST00000477531 MT-CO2P00403 227 aa11.75□□□□□ -0.53
CLDN11-204ENST00000477531 IFNA17P01571 189 aa11.75□□□□□ -0.53
CLDN11-204ENST00000477531 CTSGP08311 255 aa11.75□□□□□ -0.53
CLDN11-204ENST00000477531 FCGR2BP31994 310 aaPredicted RBP11.75□□□□□ -0.53
CLDN11-204ENST00000477531 ADMP35318 185 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms