RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 NDUFB8O95169 186 aa13.72□□□□□ -0.21
SMIM4-202ENST00000476842 IFNA17P01571 189 aa13.72□□□□□ -0.21
SMIM4-202ENST00000476842 IGLL1P15814 213 aa13.72□□□□□ -0.21
SMIM4-202ENST00000476842 VAMP1P23763 118 aa13.72□□□□□ -0.21
SMIM4-202ENST00000476842 MECP2P51608 486 aaKnown RBP13.72□□□□□ -0.21
SMIM4-202ENST00000476842 RAB25P57735 213 aa13.72□□□□□ -0.21
SMIM4-202ENST00000476842 PPP1R1AQ13522 171 aa13.72□□□□□ -0.21
SMIM4-202ENST00000476842 C15orf32Q32M92 178 aa13.72□□□□□ -0.21
SMIM4-202ENST00000476842 OXLD1Q5BKU9 147 aa13.72□□□□□ -0.21
SMIM4-202ENST00000476842 LYZL2Q7Z4W2 148 aa13.72□□□□□ -0.21
SMIM4-202ENST00000476842 LRTM2Q8N967 370 aa13.72□□□□□ -0.21
SMIM4-202ENST00000476842 MCRIP2Q9BUT9 160 aaKnown RBP13.72□□□□□ -0.21
SMIM4-202ENST00000476842 DMRT1Q9Y5R6 373 aa13.72□□□□□ -0.21
SMIM4-202ENST00000476842 F11RQ9Y624 299 aaKnown RBP13.72□□□□□ -0.21
SMIM4-202ENST00000476842 DUXBA0A1W2PPF3 345 aa13.71□□□□□ -0.21
SMIM4-202ENST00000476842 INS-IGF2F8WCM5 200 aa13.71□□□□□ -0.21
SMIM4-202ENST00000476842 UPK1BO75841 260 aa13.71□□□□□ -0.21
SMIM4-202ENST00000476842 EXOSC2Q13868 293 aaKnown RBP13.71□□□□□ -0.21
SMIM4-202ENST00000476842 ANKRD55Q3KP44 614 aa13.71□□□□□ -0.21
SMIM4-202ENST00000476842 FAM209BQ5JX69 171 aa13.71□□□□□ -0.21
SMIM4-202ENST00000476842 SLC25A24Q6NUK1 477 aa13.71□□□□□ -0.21
SMIM4-202ENST00000476842 OR2C3Q8N628 320 aa13.71□□□□□ -0.21
SMIM4-202ENST00000476842 OR1L6Q8NGR2 347 aa13.71□□□□□ -0.21
SMIM4-202ENST00000476842 OR52E5Q8NH55 327 aa13.71□□□□□ -0.21
SMIM4-202ENST00000476842 PDCD10Q9BUL8 212 aa13.71□□□□□ -0.21
SMIM4-202ENST00000476842 THYN1Q9P016 225 aa13.71□□□□□ -0.21
SMIM4-202ENST00000476842 CACNG5Q9UF02 275 aa13.71□□□□□ -0.21
SMIM4-202ENST00000476842 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.7□□□□□ -0.22
SMIM4-202ENST00000476842 C9orf170A2RU37 121 aa13.7□□□□□ -0.22
SMIM4-202ENST00000476842 SPCS3P61009 180 aa13.7□□□□□ -0.22
SMIM4-202ENST00000476842 ERHP84090 104 aaKnown RBP13.7□□□□□ -0.22
SMIM4-202ENST00000476842 NMSQ5H8A3 153 aa13.7□□□□□ -0.22
SMIM4-202ENST00000476842 DCUN1D4Q92564 292 aa13.7□□□□□ -0.22
SMIM4-202ENST00000476842 DLX4Q92988 240 aaPredicted RBP13.7□□□□□ -0.22
SMIM4-202ENST00000476842 PLEKHA3Q9HB20 300 aa13.7□□□□□ -0.22
SMIM4-202ENST00000476842 CACFD1Q9UGQ2 172 aa13.7□□□□□ -0.22
SMIM4-202ENST00000476842 TBC1D24Q9ULP9 559 aa13.7□□□□□ -0.22
SMIM4-202ENST00000476842 TCRBP04435 133 aa13.69□□□□□ -0.22
SMIM4-202ENST00000476842 OR4E1P0C645 316 aa13.69□□□□□ -0.22
SMIM4-202ENST00000476842 SULT1A3P0DMM9 295 aa13.69□□□□□ -0.22
SMIM4-202ENST00000476842 SULT1A4P0DMN0 295 aa13.69□□□□□ -0.22
SMIM4-202ENST00000476842 ZP3P21754 424 aa13.69□□□□□ -0.22
SMIM4-202ENST00000476842 SLURP1P55000 103 aa13.69□□□□□ -0.22
SMIM4-202ENST00000476842 MFAP2P55001 183 aa13.69□□□□□ -0.22
SMIM4-202ENST00000476842 ASAH1Q13510 395 aa13.69□□□□□ -0.22
SMIM4-202ENST00000476842 PDLIM3Q53GG5 364 aaPredicted RBP13.69□□□□□ -0.22
SMIM4-202ENST00000476842 KPRPQ5T749 579 aaPredicted RBP13.69□□□□□ -0.22
SMIM4-202ENST00000476842 MZT2BQ6NZ67 158 aa13.69□□□□□ -0.22
SMIM4-202ENST00000476842 ZNF114Q8NC26 417 aa13.69□□□□□ -0.22
SMIM4-202ENST00000476842 OR1P1Q8NH06 330 aa13.69□□□□□ -0.22
SMIM4-202ENST00000476842 CXorf58Q96LI9 332 aa13.69□□□□□ -0.22
SMIM4-202ENST00000476842 GPR61Q9BZJ8 451 aa13.69□□□□□ -0.22
SMIM4-202ENST00000476842 TRBV7-1A0A0A6YYK4 115 aa13.68□□□□□ -0.22
SMIM4-202ENST00000476842 A0A1B0GU03 582 aa13.68□□□□□ -0.22
SMIM4-202ENST00000476842 OVOL1O14753 267 aa13.68□□□□□ -0.22
SMIM4-202ENST00000476842 TRBV12-3P01733 135 aa13.68□□□□□ -0.22
SMIM4-202ENST00000476842 ANXA7P20073 488 aaKnown RBP13.68□□□□□ -0.22
SMIM4-202ENST00000476842 HOXD3P31249 432 aaPredicted RBP13.68□□□□□ -0.22
SMIM4-202ENST00000476842 IFITM3Q01628 133 aa13.68□□□□□ -0.22
SMIM4-202ENST00000476842 BEAN1Q3B7T3 259 aa13.68□□□□□ -0.22
SMIM4-202ENST00000476842 SPINK9Q5DT21 86 aa13.68□□□□□ -0.22
SMIM4-202ENST00000476842 C1QL4Q86Z23 238 aa13.68□□□□□ -0.22
SMIM4-202ENST00000476842 VN1R17PQ8TDU5 208 aa13.68□□□□□ -0.22
SMIM4-202ENST00000476842 EEF1AKMT3Q96AZ1 226 aa13.68□□□□□ -0.22
SMIM4-202ENST00000476842 C20orf85Q9H1P6 137 aa13.68□□□□□ -0.22
SMIM4-202ENST00000476842 FAM240BA0A1B0GVZ2 78 aa13.67□□□□□ -0.22
SMIM4-202ENST00000476842 HLA-AP01891 365 aaKnown RBP13.67□□□□□ -0.22
SMIM4-202ENST00000476842 DHRS2Q13268 280 aa13.67□□□□□ -0.22
SMIM4-202ENST00000476842 KLF5Q13887 457 aaPredicted RBP13.67□□□□□ -0.22
SMIM4-202ENST00000476842 SMCO1Q147U7 214 aa13.67□□□□□ -0.22
SMIM4-202ENST00000476842 LYG2Q86SG7 212 aa13.67□□□□□ -0.22
SMIM4-202ENST00000476842 ENY2Q9NPA8 101 aa13.67□□□□□ -0.22
SMIM4-202ENST00000476842 TMED3Q9Y3Q3 217 aa13.67□□□□□ -0.22
SMIM4-202ENST00000476842 NOTCH3Q9UM47 2321 aa13.66□□□□□ -0.22
SMIM4-202ENST00000476842 MFSD2BA6NFX1 497 aa13.66□□□□□ -0.22
SMIM4-202ENST00000476842 BMPR1BO00238 502 aa13.66□□□□□ -0.22
SMIM4-202ENST00000476842 SLC25A6P12236 298 aa13.66□□□□□ -0.22
SMIM4-202ENST00000476842 SNCAP37840 140 aa13.66□□□□□ -0.22
SMIM4-202ENST00000476842 HOXA1P49639 335 aaPredicted RBP13.66□□□□□ -0.22
SMIM4-202ENST00000476842 C4orf46Q504U0 113 aa13.66□□□□□ -0.22
SMIM4-202ENST00000476842 CCDC140Q96MF4 163 aa13.66□□□□□ -0.22
SMIM4-202ENST00000476842 S4R3C0 116 aa13.66□□□□□ -0.22
SMIM4-202ENST00000476842 SEC14L6B5MCN3 397 aa13.65□□□□□ -0.22
SMIM4-202ENST00000476842 WIPF1O43516 503 aa13.65□□□□□ -0.22
SMIM4-202ENST00000476842 PITX3O75364 302 aa13.65□□□□□ -0.22
SMIM4-202ENST00000476842 IGHV3-23P01764 117 aa13.65□□□□□ -0.22
SMIM4-202ENST00000476842 SUB1P53999 127 aaKnown RBP eCLIP13.65□□□□□ -0.22
SMIM4-202ENST00000476842 TATDN3Q17R31 274 aa13.65□□□□□ -0.22
SMIM4-202ENST00000476842 RPEL1Q2QD12 228 aa13.65□□□□□ -0.22
SMIM4-202ENST00000476842 C9orf66Q5T8R8 295 aa13.65□□□□□ -0.22
SMIM4-202ENST00000476842 PVRIGQ6DKI7 326 aa13.65□□□□□ -0.22
SMIM4-202ENST00000476842 CLEC19AQ6UXS0 136 aa13.65□□□□□ -0.22
SMIM4-202ENST00000476842 COQ8AQ8NI60 647 aa13.65□□□□□ -0.22
SMIM4-202ENST00000476842 ZNF502Q8TBZ5 544 aa13.65□□□□□ -0.22
SMIM4-202ENST00000476842 ATP6V0BQ99437 205 aa13.65□□□□□ -0.22
SMIM4-202ENST00000476842 HSPB7Q9UBY9 170 aa13.65□□□□□ -0.22
SMIM4-202ENST00000476842 TRAV6A0A075B6T7 132 aa13.64□□□□□ -0.23
SMIM4-202ENST00000476842 K7EIM0 57 aa13.64□□□□□ -0.23
SMIM4-202ENST00000476842 GGCTO75223 188 aaKnown RBP13.64□□□□□ -0.23
SMIM4-202ENST00000476842 CLEC3BP05452 202 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms