RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 AKIRIN2Q53H80 203 aa8.21□□□□□ -1.1
COL12A1-206ENST00000474564 SPINK9Q5DT21 86 aa8.21□□□□□ -1.1
COL12A1-206ENST00000474564 ETFRF1Q6IPR1 90 aa8.21□□□□□ -1.1
COL12A1-206ENST00000474564 EIF5AL1Q6IS14 154 aaKnown RBP8.21□□□□□ -1.1
COL12A1-206ENST00000474564 SLC24A4Q8NFF2 622 aa8.21□□□□□ -1.1
COL12A1-206ENST00000474564 SGMS2Q8NHU3 365 aa8.21□□□□□ -1.1
COL12A1-206ENST00000474564 TPSG1Q9NRR2 321 aa8.21□□□□□ -1.1
COL12A1-206ENST00000474564 ZNF355PQ9NSJ1 428 aa8.21□□□□□ -1.1
COL12A1-206ENST00000474564 LYRM2Q9NU23 88 aaPredicted RBP8.21□□□□□ -1.1
COL12A1-206ENST00000474564 FBXL17Q9UF56 701 aa8.21□□□□□ -1.1
COL12A1-206ENST00000474564 CREBBPQ92793 2442 aa8.2□□□□□ -1.1
COL12A1-206ENST00000474564 IGHV7-81A0A0B4J1V7 117 aa8.2□□□□□ -1.1
COL12A1-206ENST00000474564 TRAV41A0A0B4J266 112 aa8.2□□□□□ -1.1
COL12A1-206ENST00000474564 RPS10-NUDT3A0A1W2PQS6 291 aa8.2□□□□□ -1.1
COL12A1-206ENST00000474564 SCGB2A1O75556 95 aa8.2□□□□□ -1.1
COL12A1-206ENST00000474564 DFFBO76075 338 aa8.2□□□□□ -1.1
COL12A1-206ENST00000474564 IFNA5P01569 189 aa8.2□□□□□ -1.1
COL12A1-206ENST00000474564 NPY1RP25929 384 aa8.2□□□□□ -1.1
COL12A1-206ENST00000474564 VDAC2P45880 294 aaPredicted RBP8.2□□□□□ -1.1
COL12A1-206ENST00000474564 EXOSC2Q13868 293 aaKnown RBP8.2□□□□□ -1.1
COL12A1-206ENST00000474564 ZNF266Q14584 549 aa8.2□□□□□ -1.1
COL12A1-206ENST00000474564 TEX261Q6UWH6 196 aa8.2□□□□□ -1.1
COL12A1-206ENST00000474564 TMEM217Q8N7C4 229 aa8.2□□□□□ -1.1
COL12A1-206ENST00000474564 OR10P1Q8NGE3 313 aa8.2□□□□□ -1.1
COL12A1-206ENST00000474564 ST8SIA2Q92186 375 aa8.2□□□□□ -1.1
COL12A1-206ENST00000474564 PINX1Q96BK5 328 aaKnown RBP8.2□□□□□ -1.1
COL12A1-206ENST00000474564 DUX5Q96PT3 197 aa8.2□□□□□ -1.1
COL12A1-206ENST00000474564 ITPR2Q14571 2701 aa8.19□□□□□ -1.1
COL12A1-206ENST00000474564 IGSF23A1L1A6 192 aa8.19□□□□□ -1.1
COL12A1-206ENST00000474564 FAM181BA6NEQ2 426 aa8.19□□□□□ -1.1
COL12A1-206ENST00000474564 NPIPB5A8MRT5 1133 aa8.19□□□□□ -1.1
COL12A1-206ENST00000474564 ATP6V0E1O15342 81 aa8.19□□□□□ -1.1
COL12A1-206ENST00000474564 JTBO76095 146 aa8.19□□□□□ -1.1
COL12A1-206ENST00000474564 CST7O76096 145 aa8.19□□□□□ -1.1
COL12A1-206ENST00000474564 IGF1P05019 195 aa8.19□□□□□ -1.1
COL12A1-206ENST00000474564 SULT1A1P50225 295 aa8.19□□□□□ -1.1
COL12A1-206ENST00000474564 BLCAPP62952 87 aa8.19□□□□□ -1.1
COL12A1-206ENST00000474564 CLINT1Q14677 625 aa8.19□□□□□ -1.1
COL12A1-206ENST00000474564 NDUFA5Q16718 116 aa8.19□□□□□ -1.1
COL12A1-206ENST00000474564 ATP6V1FQ16864 119 aa8.19□□□□□ -1.1
COL12A1-206ENST00000474564 ECSCRQ19T08 205 aa8.19□□□□□ -1.1
COL12A1-206ENST00000474564 TUSC1Q2TAM9 212 aa8.19□□□□□ -1.1
COL12A1-206ENST00000474564 C2orf83Q53S99 150 aa8.19□□□□□ -1.1
COL12A1-206ENST00000474564 C10orf55Q5SWW7 151 aa8.19□□□□□ -1.1
COL12A1-206ENST00000474564 OR8G2PQ6IF36 304 aa8.19□□□□□ -1.1
COL12A1-206ENST00000474564 ALKAL2Q6UX46 152 aa8.19□□□□□ -1.1
COL12A1-206ENST00000474564 CENPVQ7Z7K6 275 aaPredicted RBP8.19□□□□□ -1.1
COL12A1-206ENST00000474564 TTC9CQ8N5M4 171 aa8.19□□□□□ -1.1
COL12A1-206ENST00000474564 TMEM252Q8N6L7 170 aa8.19□□□□□ -1.1
COL12A1-206ENST00000474564 LFNGQ8NES3 379 aa8.19□□□□□ -1.1
COL12A1-206ENST00000474564 OR10W1Q8NGF6 305 aa8.19□□□□□ -1.1
COL12A1-206ENST00000474564 SCGB1C1Q8TD33 95 aa8.19□□□□□ -1.1
COL12A1-206ENST00000474564 RNASEH2CQ8TDP1 164 aaKnown RBP8.19□□□□□ -1.1
COL12A1-206ENST00000474564 RBMXL1Q96E39 390 aaKnown RBP8.19□□□□□ -1.1
COL12A1-206ENST00000474564 ZNF580Q9UK33 172 aa8.19□□□□□ -1.1
COL12A1-206ENST00000474564 NOTCH2Q04721 2471 aa8.19□□□□□ -1.1
COL12A1-206ENST00000474564 H3BUA1 57 aa8.18□□□□□ -1.1
COL12A1-206ENST00000474564 RGS13O14921 159 aa8.18□□□□□ -1.1
COL12A1-206ENST00000474564 METTL15P1P0C7V9 234 aa8.18□□□□□ -1.1
COL12A1-206ENST00000474564 IFITM2Q01629 132 aa8.18□□□□□ -1.1
COL12A1-206ENST00000474564 NHLH2Q02577 135 aa8.18□□□□□ -1.1
COL12A1-206ENST00000474564 ETV3LQ6ZN32 361 aa8.18□□□□□ -1.1
COL12A1-206ENST00000474564 COMMD1Q8N668 190 aa8.18□□□□□ -1.1
COL12A1-206ENST00000474564 ZNF680Q8NEM1 530 aa8.18□□□□□ -1.1
COL12A1-206ENST00000474564 OR5T1Q8NG75 326 aa8.18□□□□□ -1.1
COL12A1-206ENST00000474564 OR5C1Q8NGR4 320 aa8.18□□□□□ -1.1
COL12A1-206ENST00000474564 OR1P1Q8NH06 330 aa8.18□□□□□ -1.1
COL12A1-206ENST00000474564 OR4F5Q8NH21 305 aa8.18□□□□□ -1.1
COL12A1-206ENST00000474564 SCARB1Q8WTV0 552 aa8.18□□□□□ -1.1
COL12A1-206ENST00000474564 HSPB9Q9BQS6 159 aa8.18□□□□□ -1.1
COL12A1-206ENST00000474564 FAM103A1Q9BTL3 118 aaKnown RBP8.18□□□□□ -1.1
COL12A1-206ENST00000474564 WNT10AQ9GZT5 417 aa8.18□□□□□ -1.1
COL12A1-206ENST00000474564 A0A1B0GUS0 222 aa8.17□□□□□ -1.1
COL12A1-206ENST00000474564 IGLC7A0M8Q6 106 aa8.17□□□□□ -1.1
COL12A1-206ENST00000474564 SMCO3A2RU48 225 aa8.17□□□□□ -1.1
COL12A1-206ENST00000474564 CYSRT1A8MQ03 144 aa8.17□□□□□ -1.1
COL12A1-206ENST00000474564 AMY1AP04745 511 aa8.17□□□□□ -1.1
COL12A1-206ENST00000474564 CRYGCP07315 174 aa8.17□□□□□ -1.1
COL12A1-206ENST00000474564 APELAP0DMC3 54 aa8.17□□□□□ -1.1
COL12A1-206ENST00000474564 MYOD1P15172 320 aa8.17□□□□□ -1.1
COL12A1-206ENST00000474564 SLC38A11Q08AI6 406 aa8.17□□□□□ -1.1
COL12A1-206ENST00000474564 RAB31Q13636 194 aa8.17□□□□□ -1.1
COL12A1-206ENST00000474564 MRGPRG-AS1Q2M3A8 158 aa8.17□□□□□ -1.1
COL12A1-206ENST00000474564 FAM209BQ5JX69 171 aa8.17□□□□□ -1.1
COL12A1-206ENST00000474564 RPL7L1Q6DKI1 246 aaKnown RBP8.17□□□□□ -1.1
COL12A1-206ENST00000474564 BAP18Q8IXM2 172 aa8.17□□□□□ -1.1
COL12A1-206ENST00000474564 STPG2Q8N412 459 aa8.17□□□□□ -1.1
COL12A1-206ENST00000474564 ZNF114Q8NC26 417 aa8.17□□□□□ -1.1
COL12A1-206ENST00000474564 FAM110DQ8TAY7 271 aaPredicted RBP8.17□□□□□ -1.1
COL12A1-206ENST00000474564 CACNG8Q8WXS5 425 aa8.17□□□□□ -1.1
COL12A1-206ENST00000474564 PHYHIPLQ96FC7 376 aa8.17□□□□□ -1.1
COL12A1-206ENST00000474564 MISP3Q96FF7 219 aa8.17□□□□□ -1.1
COL12A1-206ENST00000474564 SLC35E1Q96K37 410 aa8.17□□□□□ -1.1
COL12A1-206ENST00000474564 ATP5SQ99766 215 aa8.17□□□□□ -1.1
COL12A1-206ENST00000474564 GGACTQ9BVM4 153 aa8.17□□□□□ -1.1
COL12A1-206ENST00000474564 GAR1Q9NY12 217 aaKnown RBP8.17□□□□□ -1.1
COL12A1-206ENST00000474564 F11RQ9Y624 299 aaKnown RBP8.17□□□□□ -1.1
COL12A1-206ENST00000474564 ITPR3Q14573 2671 aa8.17□□□□□ -1.1
COL12A1-206ENST00000474564 ASH1LQ9NR48 2969 aaKnown RBP8.17□□□□□ -1.1
COL12A1-206ENST00000474564 A0A0G2JLM5 398 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms